RNA–Protein interactions for RNA: ENST00000619546.4

ACACA-245, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 5,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-245ENST00000619546 DCAF8L2P0C7V8 631 aa15.07■□□□□ 0
ACACA-245ENST00000619546 PELP1Q8IZL8 1130 aaKnown RBP14.59□□□□□ -0.07
ACACA-245ENST00000619546 FAM9AQ8IZU1 332 aaPredicted RBP14.28□□□□□ -0.12
ACACA-245ENST00000619546 APLP2Q06481 763 aa14.13□□□□□ -0.15
ACACA-245ENST00000619546 SUPT5HO00267 1087 aaKnown RBP14.11□□□□□ -0.15
ACACA-245ENST00000619546 CCER1Q8TC90 406 aaPredicted RBP13.93□□□□□ -0.18
ACACA-245ENST00000619546 ERICH6Q7L0X2 663 aa13.82□□□□□ -0.2
ACACA-245ENST00000619546 EHMT2Q96KQ7 1210 aa13.68□□□□□ -0.22
ACACA-245ENST00000619546 SHROOM4Q9ULL8 1493 aa13.62□□□□□ -0.23
ACACA-245ENST00000619546 CENPBP07199 599 aaPredicted RBP13.61□□□□□ -0.23
ACACA-245ENST00000619546 NISCHQ9Y2I1 1504 aa13.56□□□□□ -0.24
ACACA-245ENST00000619546 ZEB1P37275 1124 aaPredicted RBP13.54□□□□□ -0.24
ACACA-245ENST00000619546 NEFLP07196 543 aa13.48□□□□□ -0.25
ACACA-245ENST00000619546 MYT1Q01538 1121 aa13.42□□□□□ -0.26
ACACA-245ENST00000619546 ATP1B4Q9UN42 357 aaPredicted RBP13.37□□□□□ -0.27
ACACA-245ENST00000619546 PCGF6Q9BYE7 350 aa13.33□□□□□ -0.28
ACACA-245ENST00000619546 TTBK1Q5TCY1 1321 aaPredicted RBP13.28□□□□□ -0.28
ACACA-245ENST00000619546 DAXXQ9UER7 740 aaPredicted RBP13.28□□□□□ -0.28
ACACA-245ENST00000619546 YTHDC1Q96MU7 727 aaKnown RBP13.25□□□□□ -0.29
ACACA-245ENST00000619546 RANGAP1P46060 587 aaPredicted RBP13.22□□□□□ -0.29
ACACA-245ENST00000619546 TRIM41Q8WV44 630 aa13.22□□□□□ -0.29
ACACA-245ENST00000619546 UBTFP17480 764 aaKnown RBP13.2□□□□□ -0.3
ACACA-245ENST00000619546 MYT1LQ9UL68 1186 aa13.12□□□□□ -0.31
ACACA-245ENST00000619546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.96□□□□□ -0.34
ACACA-245ENST00000619546 HNRNPUL2Q1KMD3 747 aaKnown RBP12.96□□□□□ -0.34
ACACA-245ENST00000619546 POLR3GLQ9BT43 218 aa12.89□□□□□ -0.35
ACACA-245ENST00000619546 ZNF316A6NFI3 1004 aaPredicted RBP12.88□□□□□ -0.35
ACACA-245ENST00000619546 RTL5Q5HYW3 569 aaPredicted RBP12.83□□□□□ -0.36
ACACA-245ENST00000619546 SLC4A1APQ9BWU0 796 aaKnown RBP12.82□□□□□ -0.36
ACACA-245ENST00000619546 CLSPNQ9HAW4 1339 aa12.82□□□□□ -0.36
ACACA-245ENST00000619546 ZBTB47Q9UFB7 747 aaPredicted RBP12.76□□□□□ -0.37
ACACA-245ENST00000619546 TRIM26Q12899 539 aaPredicted RBP12.75□□□□□ -0.37
ACACA-245ENST00000619546 ITGAEP38570 1179 aa12.71□□□□□ -0.37
ACACA-245ENST00000619546 CHIC1Q5VXU3 224 aa12.66□□□□□ -0.38
ACACA-245ENST00000619546 NEFMP07197 916 aa12.6□□□□□ -0.39
ACACA-245ENST00000619546 CNGB1Q14028 1251 aaPredicted RBP12.55□□□□□ -0.4
ACACA-245ENST00000619546 PPARGC1BQ86YN6 1023 aaKnown RBP12.53□□□□□ -0.4
ACACA-245ENST00000619546 HRCP23327 699 aa12.53□□□□□ -0.4
ACACA-245ENST00000619546 TRIM52Q96A61 297 aa12.52□□□□□ -0.41
ACACA-245ENST00000619546 CANXP27824 592 aaKnown RBP12.47□□□□□ -0.41
ACACA-245ENST00000619546 FAM50AQ14320 339 aaKnown RBP12.46□□□□□ -0.41
ACACA-245ENST00000619546 SLC24A1O60721 1099 aa12.43□□□□□ -0.42
ACACA-245ENST00000619546 CDK11AQ9UQ88 783 aaPredicted RBP12.43□□□□□ -0.42
ACACA-245ENST00000619546 ANP32CO43423 234 aa12.42□□□□□ -0.42
ACACA-245ENST00000619546 BCANQ96GW7 911 aa12.4□□□□□ -0.42
ACACA-245ENST00000619546 ANP32BQ92688 251 aaKnown RBP12.38□□□□□ -0.43
ACACA-245ENST00000619546 DIEXFQ68CQ4 756 aaKnown RBP12.35□□□□□ -0.43
ACACA-245ENST00000619546 ESF1Q9H501 851 aaKnown RBP12.35□□□□□ -0.43
ACACA-245ENST00000619546 ZNF326Q5BKZ1 582 aaKnown RBP12.31□□□□□ -0.44
ACACA-245ENST00000619546 NEUROD1Q13562 356 aa12.29□□□□□ -0.44
ACACA-245ENST00000619546 ANP32AP39687 249 aaKnown RBP12.29□□□□□ -0.44
ACACA-245ENST00000619546 UPF2Q9HAU5 1272 aaKnown RBP12.24□□□□□ -0.45
ACACA-245ENST00000619546 CDK11BP21127 795 aaKnown RBP12.23□□□□□ -0.45
ACACA-245ENST00000619546 FBLN2P98095 1184 aa12.22□□□□□ -0.45
ACACA-245ENST00000619546 HSP90AA1P07900 732 aaKnown RBP12.22□□□□□ -0.45
ACACA-245ENST00000619546 STAG3Q9UJ98 1225 aa12.19□□□□□ -0.46
ACACA-245ENST00000619546 BCL11AQ9H165 835 aa12.18□□□□□ -0.46
ACACA-245ENST00000619546 LOC105371045A0A1W2PR82 267 aa12.15□□□□□ -0.46
ACACA-245ENST00000619546 GLIPR1L2Q4G1C9 344 aa12.15□□□□□ -0.46
ACACA-245ENST00000619546 NPM1P06748 294 aaKnown RBP eCLIP12.14□□□□□ -0.472e-6■■■■■ 46
ACACA-245ENST00000619546 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.11□□□□□ -0.47
ACACA-245ENST00000619546 NPM2Q86SE8 214 aaKnown RBP12.09□□□□□ -0.47
ACACA-245ENST00000619546 ZNF777Q9ULD5 760 aaPredicted RBP12.05□□□□□ -0.48
ACACA-245ENST00000619546 CHGAP10645 457 aaKnown RBP12.03□□□□□ -0.48
ACACA-245ENST00000619546 MYH16Q9H6N6 1097 aa12.03□□□□□ -0.48
ACACA-245ENST00000619546 EIF5BO60841 1220 aaKnown RBP12.02□□□□□ -0.49
ACACA-245ENST00000619546 GTF3C3Q9Y5Q9 886 aa12□□□□□ -0.49
ACACA-245ENST00000619546 TONSLQ96HA7 1378 aa11.99□□□□□ -0.49
ACACA-245ENST00000619546 PABPN1Q86U42 306 aaKnown RBP eCLIP11.97□□□□□ -0.49
ACACA-245ENST00000619546 ANP32EQ9BTT0 268 aa11.97□□□□□ -0.49
ACACA-245ENST00000619546 NCLP19338 710 aaKnown RBP11.96□□□□□ -0.49
ACACA-245ENST00000619546 WDR43Q15061 677 aaKnown RBP eCLIP11.96□□□□□ -0.49
ACACA-245ENST00000619546 ACIN1Q9UKV3 1341 aaKnown RBP11.96□□□□□ -0.5
ACACA-245ENST00000619546 ABCC9O60706 1549 aa11.9□□□□□ -0.51
ACACA-245ENST00000619546 SCAF1Q9H7N4 1312 aaKnown RBP11.89□□□□□ -0.51
ACACA-245ENST00000619546 ZRSR1Q15695 479 aaKnown RBP11.89□□□□□ -0.51
ACACA-245ENST00000619546 P3H3Q8IVL6 736 aa11.89□□□□□ -0.51
ACACA-245ENST00000619546 TMC1Q8TDI8 760 aa11.89□□□□□ -0.51
ACACA-245ENST00000619546 CSRNP3Q8WYN3 585 aa11.89□□□□□ -0.51
ACACA-245ENST00000619546 GOLGA6L22H0YM25 854 aa11.89□□□□□ -0.51
ACACA-245ENST00000619546 ARID3CA6NKF2 412 aa11.88□□□□□ -0.51
ACACA-245ENST00000619546 BECN1Q14457 450 aa11.87□□□□□ -0.51
ACACA-245ENST00000619546 TSPY4P0CV99 314 aa11.87□□□□□ -0.51
ACACA-245ENST00000619546 TSPY10P0CW01 314 aa11.87□□□□□ -0.51
ACACA-245ENST00000619546 PLPPR3Q6T4P5 718 aa11.86□□□□□ -0.51
ACACA-245ENST00000619546 CCDC136Q96JN2 1154 aa11.86□□□□□ -0.51
ACACA-245ENST00000619546 A0A0G2JS52 829 aa11.85□□□□□ -0.51
ACACA-245ENST00000619546 HNRNPUQ00839 825 aaKnown RBP eCLIP11.85□□□□□ -0.51
ACACA-245ENST00000619546 DDRGK1Q96HY6 314 aa11.85□□□□□ -0.51
ACACA-245ENST00000619546 CASC1Q6TDU7 716 aa11.84□□□□□ -0.51
ACACA-245ENST00000619546 TNNT2P45379 298 aaPredicted RBP11.83□□□□□ -0.52
ACACA-245ENST00000619546 PPP1R15AO75807 674 aaPredicted RBP11.81□□□□□ -0.52
ACACA-245ENST00000619546 FKBP8Q14318 412 aa11.81□□□□□ -0.52
ACACA-245ENST00000619546 HAP1P54257 671 aaPredicted RBP11.81□□□□□ -0.52
ACACA-245ENST00000619546 FAM9BQ8IZU0 186 aa11.8□□□□□ -0.52
ACACA-245ENST00000619546 TRIM44Q96DX7 344 aaPredicted RBP11.8□□□□□ -0.52
ACACA-245ENST00000619546 CFAP53Q96M91 514 aa11.8□□□□□ -0.52
ACACA-245ENST00000619546 C14orf37Q86TY3 774 aa11.79□□□□□ -0.52
ACACA-245ENST00000619546 CDCA8Q53HL2 280 aa11.79□□□□□ -0.52
ACACA-245ENST00000619546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.78□□□□□ -0.521e-7■■■□□ 16.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms