RNA–Protein interactions for RNA: ENST00000520994.1

MCM4-211, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 3

Gene MCM4, Length 522 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-211ENST00000520994 NISCHQ9Y2I1 1504 aa50.61■■■■■ 5.69
MCM4-211ENST00000520994 CCDC180Q9P1Z9 1646 aa45.11■■■■■ 4.81
MCM4-211ENST00000520994 ABCC9O60706 1549 aa43.93■■■■■ 4.62
MCM4-211ENST00000520994 RB1CC1Q8TDY2 1594 aa42.42■■■■■ 4.38
MCM4-211ENST00000520994 NACADO15069 1562 aa42.4■■■■■ 4.38
MCM4-211ENST00000520994 MYO15BQ96JP2 1530 aa42.25■■■■■ 4.35
MCM4-211ENST00000520994 ZCCHC6Q5VYS8 1495 aaKnown RBP42.15■■■■■ 4.34
MCM4-211ENST00000520994 DCAF8L2P0C7V8 631 aa42.02■■■■■ 4.32
MCM4-211ENST00000520994 DCAF1Q9Y4B6 1507 aa42.01■■■■■ 4.32
MCM4-211ENST00000520994 UNC13AQ9UPW8 1703 aa41.42■■■■■ 4.22
MCM4-211ENST00000520994 BICRAQ9NZM4 1560 aa41.1■■■■■ 4.17
MCM4-211ENST00000520994 PABPN1Q86U42 306 aaKnown RBP eCLIP40.98■■■■■ 4.15
MCM4-211ENST00000520994 SCRIBQ14160 1630 aa40.92■■■■■ 4.14
MCM4-211ENST00000520994 SHROOM4Q9ULL8 1493 aa40.86■■■■■ 4.13
MCM4-211ENST00000520994 DNAJC5BQ9UF47 199 aa40.35■■■■■ 4.05
MCM4-211ENST00000520994 EIF4G1Q04637 1599 aaKnown RBP40.01■■■■■ 4
MCM4-211ENST00000520994 CC2D2AQ9P2K1 1620 aa39.83■■■■□ 3.97
MCM4-211ENST00000520994 CECR2Q9BXF3 1484 aa39.56■■■■□ 3.92
MCM4-211ENST00000520994 SMARCA4P51532 1647 aa39.26■■■■□ 3.88
MCM4-211ENST00000520994 BAZ1AQ9NRL2 1556 aaPredicted RBP39.25■■■■□ 3.87
MCM4-211ENST00000520994 NCAPD3P42695 1498 aa39.11■■■■□ 3.85
MCM4-211ENST00000520994 SMARCA2P51531 1590 aa39.07■■■■□ 3.84
MCM4-211ENST00000520994 ATAD2BQ9ULI0 1458 aa39.06■■■■□ 3.84
MCM4-211ENST00000520994 PEG3Q9GZU2 1588 aa38.99■■■■□ 3.83
MCM4-211ENST00000520994 HMGXB3Q12766 1538 aa38.93■■■■□ 3.82
MCM4-211ENST00000520994 MROH2BQ7Z745 1585 aa38.92■■■■□ 3.82
MCM4-211ENST00000520994 BAZ1BQ9UIG0 1483 aaKnown RBP38.7■■■■□ 3.79
MCM4-211ENST00000520994 RSF1Q96T23 1441 aaPredicted RBP38.49■■■■□ 3.75
MCM4-211ENST00000520994 WIZO95785 1651 aa38.48■■■■□ 3.75
MCM4-211ENST00000520994 TOP2AP11388 1531 aaKnown RBP38.15■■■■□ 3.7
MCM4-211ENST00000520994 LAMC3Q9Y6N6 1575 aa38.1■■■■□ 3.69
MCM4-211ENST00000520994 NESP48681 1621 aa38■■■■□ 3.67
MCM4-211ENST00000520994 CADPSQ9ULU8 1353 aa37.93■■■■□ 3.66
MCM4-211ENST00000520994 ERCC6Q03468 1493 aa37.9■■■■□ 3.66
MCM4-211ENST00000520994 PDS5BQ9NTI5 1447 aa37.8■■■■□ 3.64
MCM4-211ENST00000520994 CFTRP13569 1480 aa37.71■■■■□ 3.63
MCM4-211ENST00000520994 CUX2O14529 1486 aa37.67■■■■□ 3.62
MCM4-211ENST00000520994 CCDC88BA6NC98 1476 aa37.65■■■■□ 3.62
MCM4-211ENST00000520994 KIF21AQ7Z4S6 1674 aa37.63■■■■□ 3.61
MCM4-211ENST00000520994 THOC2Q8NI27 1593 aaKnown RBP37.55■■■■□ 3.6
MCM4-211ENST00000520994 PRDM2Q13029 1718 aa37.47■■■■□ 3.59
MCM4-211ENST00000520994 FANCD2Q9BXW9 1451 aa37.44■■■■□ 3.58
MCM4-211ENST00000520994 CEP164Q9UPV0 1460 aa37.41■■■■□ 3.58
MCM4-211ENST00000520994 MRC2Q9UBG0 1479 aa37.38■■■■□ 3.57
MCM4-211ENST00000520994 WDR62O43379 1518 aa37.3■■■■□ 3.56
MCM4-211ENST00000520994 SUPT5HO00267 1087 aaKnown RBP37.27■■■■□ 3.56
MCM4-211ENST00000520994 URB2Q14146 1524 aaKnown RBP37.05■■■■□ 3.52
MCM4-211ENST00000520994 ABCC8Q09428 1581 aa36.97■■■■□ 3.51
MCM4-211ENST00000520994 TOPBP1Q92547 1522 aa36.85■■■■□ 3.49
MCM4-211ENST00000520994 DNMBPQ6XZF7 1577 aa36.83■■■■□ 3.49
MCM4-211ENST00000520994 IFT140Q96RY7 1462 aa36.67■■■■□ 3.46
MCM4-211ENST00000520994 POLA1P09884 1462 aaPredicted RBP36.53■■■■□ 3.44
MCM4-211ENST00000520994 CUX1P39880 1505 aa36.52■■■■□ 3.44
MCM4-211ENST00000520994 DNAJC5Q9H3Z4 198 aa36.5■■■■□ 3.43
MCM4-211ENST00000520994 TARBP1Q13395 1621 aaKnown RBP36.48■■■■□ 3.43
MCM4-211ENST00000520994 FGD5Q6ZNL6 1462 aa36.4■■■■□ 3.42
MCM4-211ENST00000520994 ZNF608Q9ULD9 1512 aaPredicted RBP36.39■■■■□ 3.42
MCM4-211ENST00000520994 SOGA1O94964 1423 aa36.36■■■■□ 3.41
MCM4-211ENST00000520994 WDR97A6NE52 1622 aa36.34■■■■□ 3.41
MCM4-211ENST00000520994 EIF4G3O43432 1585 aaKnown RBP36.3■■■■□ 3.4
MCM4-211ENST00000520994 WRNQ14191 1432 aaPredicted RBP eCLIP36.29■■■■□ 3.4
MCM4-211ENST00000520994 RAD54L2Q9Y4B4 1467 aa36.29■■■■□ 3.4
MCM4-211ENST00000520994 BIVM-ERCC5R4GMW8 1640 aa36.28■■■■□ 3.4
MCM4-211ENST00000520994 TOP2BQ02880 1626 aa36.26■■■■□ 3.4
MCM4-211ENST00000520994 AQRO60306 1485 aaKnown RBP eCLIP36.18■■■■□ 3.384e-11■■■■■ 47.1
MCM4-211ENST00000520994 SYNJ1O43426 1573 aa36.16■■■■□ 3.38
MCM4-211ENST00000520994 ABCA10Q8WWZ4 1543 aa36.13■■■■□ 3.38
MCM4-211ENST00000520994 TDRD9Q8NDG6 1382 aaKnown RBP36.09■■■■□ 3.37
MCM4-211ENST00000520994 OSCARQ8IYS5 282 aa36.03■■■■□ 3.36
MCM4-211ENST00000520994 GRIN2BQ13224 1484 aa35.99■■■■□ 3.35
MCM4-211ENST00000520994 ABCA5Q8WWZ7 1642 aa35.97■■■■□ 3.35
MCM4-211ENST00000520994 GAPVD1Q14C86 1478 aa35.97■■■■□ 3.35
MCM4-211ENST00000520994 MAGI1Q96QZ7 1491 aaPredicted RBP35.93■■■■□ 3.34
MCM4-211ENST00000520994 PBRM1Q86U86 1689 aa35.89■■■■□ 3.34
MCM4-211ENST00000520994 SNAPC4Q5SXM2 1469 aa35.87■■■■□ 3.33
MCM4-211ENST00000520994 CHD1O14646 1710 aa35.84■■■■□ 3.33
MCM4-211ENST00000520994 SYNJ2O15056 1496 aa35.76■■■■□ 3.32
MCM4-211ENST00000520994 ERICH3Q5RHP9 1530 aa35.73■■■■□ 3.31
MCM4-211ENST00000520994 FBLN2P98095 1184 aa35.67■■■■□ 3.3
MCM4-211ENST00000520994 CHMP7Q8WUX9 453 aaPredicted RBP35.67■■■■□ 3.3
MCM4-211ENST00000520994 ADAMTS12P58397 1594 aa35.6■■■■□ 3.29
MCM4-211ENST00000520994 FHAD1B1AJZ9 1412 aa35.57■■■■□ 3.29
MCM4-211ENST00000520994 KIF27Q86VH2 1401 aa35.57■■■■□ 3.28
MCM4-211ENST00000520994 CLASP1Q7Z460 1538 aa35.52■■■■□ 3.28
MCM4-211ENST00000520994 GRIN2AQ12879 1464 aa35.51■■■■□ 3.28
MCM4-211ENST00000520994 RIMBP3CA6NJZ7 1639 aa35.43■■■■□ 3.26
MCM4-211ENST00000520994 RIMBP3BA6NNM3 1639 aa35.43■■■■□ 3.26
MCM4-211ENST00000520994 RIMBP3Q9UFD9 1639 aa35.43■■■■□ 3.26
MCM4-211ENST00000520994 ARHGEF11O15085 1522 aa35.42■■■■□ 3.26
MCM4-211ENST00000520994 IGF1RP08069 1367 aa35.41■■■■□ 3.26
MCM4-211ENST00000520994 NUP160Q12769 1436 aa35.4■■■■□ 3.26
MCM4-211ENST00000520994 CUL7Q14999 1698 aa35.38■■■■□ 3.25
MCM4-211ENST00000520994 TRIM41Q8WV44 630 aa35.32■■■■□ 3.24
MCM4-211ENST00000520994 CEP170Q5SW79 1584 aa35.3■■■■□ 3.24
MCM4-211ENST00000520994 CARMIL1Q5VZK9 1371 aa35.19■■■■□ 3.22
MCM4-211ENST00000520994 SHROOM2Q13796 1616 aa35.15■■■■□ 3.22
MCM4-211ENST00000520994 ARAP1Q96P48 1450 aa35.12■■■■□ 3.21
MCM4-211ENST00000520994 RUSC2Q8N2Y8 1516 aa35.09■■■■□ 3.21
MCM4-211ENST00000520994 KIAA0586Q9BVV6 1533 aa35.05■■■■□ 3.2
MCM4-211ENST00000520994 CYB5RLQ6IPT4 315 aa35.01■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms