RNA–Protein interactions for RNA: ENST00000258449.2

TGFBRAP1-201, Transcript of transforming growth factor beta receptor associated protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TGFBRAP1, Length 2,827 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBRAP1-201ENST00000258449 NISCHQ9Y2I1 1504 aa28.84■■■□□ 2.21
TGFBRAP1-201ENST00000258449 SHROOM4Q9ULL8 1493 aa25.1■■□□□ 1.61
TGFBRAP1-201ENST00000258449 SUPT5HO00267 1087 aaKnown RBP24.67■■□□□ 1.54
TGFBRAP1-201ENST00000258449 ZCCHC6Q5VYS8 1495 aaKnown RBP24.4■■□□□ 1.5
TGFBRAP1-201ENST00000258449 DCAF8L2P0C7V8 631 aa24.3■■□□□ 1.48
TGFBRAP1-201ENST00000258449 CCDC180Q9P1Z9 1646 aa24.27■■□□□ 1.48
TGFBRAP1-201ENST00000258449 MYO15BQ96JP2 1530 aa23.89■■□□□ 1.42
TGFBRAP1-201ENST00000258449 CHIC1Q5VXU3 224 aa23.89■■□□□ 1.41
TGFBRAP1-201ENST00000258449 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
TGFBRAP1-201ENST00000258449 PCGF6Q9BYE7 350 aa23.45■■□□□ 1.34
TGFBRAP1-201ENST00000258449 HRCP23327 699 aa23.41■■□□□ 1.34
TGFBRAP1-201ENST00000258449 LOC105371045A0A1W2PR82 267 aa23.34■■□□□ 1.33
TGFBRAP1-201ENST00000258449 PPARGC1BQ86YN6 1023 aaKnown RBP23.13■■□□□ 1.29
TGFBRAP1-201ENST00000258449 SCRIBQ14160 1630 aa23.09■■□□□ 1.29
TGFBRAP1-201ENST00000258449 ABCC9O60706 1549 aa23.06■■□□□ 1.28
TGFBRAP1-201ENST00000258449 RSF1Q96T23 1441 aaPredicted RBP22.95■■□□□ 1.26
TGFBRAP1-201ENST00000258449 FAM9AQ8IZU1 332 aaPredicted RBP22.86■■□□□ 1.25
TGFBRAP1-201ENST00000258449 TRIM41Q8WV44 630 aa22.83■■□□□ 1.24
TGFBRAP1-201ENST00000258449 EHMT2Q96KQ7 1210 aa22.82■■□□□ 1.24
TGFBRAP1-201ENST00000258449 RB1CC1Q8TDY2 1594 aa22.8■■□□□ 1.24
TGFBRAP1-201ENST00000258449 TRIM26Q12899 539 aaPredicted RBP22.78■■□□□ 1.24
TGFBRAP1-201ENST00000258449 CECR2Q9BXF3 1484 aa22.64■■□□□ 1.21
TGFBRAP1-201ENST00000258449 MROH2BQ7Z745 1585 aa22.53■■□□□ 1.2
TGFBRAP1-201ENST00000258449 NACADO15069 1562 aa22.47■■□□□ 1.19
TGFBRAP1-201ENST00000258449 WIZO95785 1651 aa22.42■■□□□ 1.18
TGFBRAP1-201ENST00000258449 ZEB1P37275 1124 aaPredicted RBP22.25■■□□□ 1.15
TGFBRAP1-201ENST00000258449 BAZ1AQ9NRL2 1556 aaPredicted RBP22.17■■□□□ 1.14
TGFBRAP1-201ENST00000258449 TTBK1Q5TCY1 1321 aaPredicted RBP22.1■■□□□ 1.13
TGFBRAP1-201ENST00000258449 ABCC8Q09428 1581 aa22.06■■□□□ 1.12
TGFBRAP1-201ENST00000258449 EIF4G1Q04637 1599 aaKnown RBP22.05■■□□□ 1.12
TGFBRAP1-201ENST00000258449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.04■■□□□ 1.12
TGFBRAP1-201ENST00000258449 CCDC88BA6NC98 1476 aa21.98■■□□□ 1.11
TGFBRAP1-201ENST00000258449 TOP2AP11388 1531 aaKnown RBP21.95■■□□□ 1.1
TGFBRAP1-201ENST00000258449 SMARCA4P51532 1647 aa21.93■■□□□ 1.1
TGFBRAP1-201ENST00000258449 CCER1Q8TC90 406 aaPredicted RBP21.93■■□□□ 1.1
TGFBRAP1-201ENST00000258449 PABPN1Q86U42 306 aaKnown RBP eCLIP21.88■■□□□ 1.09
TGFBRAP1-201ENST00000258449 SMARCA2P51531 1590 aa21.88■■□□□ 1.09
TGFBRAP1-201ENST00000258449 SOGA1O94964 1423 aa21.88■■□□□ 1.09
TGFBRAP1-201ENST00000258449 UNC13AQ9UPW8 1703 aa21.84■■□□□ 1.09
TGFBRAP1-201ENST00000258449 CEP162Q5TB80 1403 aa21.8■■□□□ 1.08
TGFBRAP1-201ENST00000258449 RUSC2Q8N2Y8 1516 aa21.79■■□□□ 1.08
TGFBRAP1-201ENST00000258449 UBTFP17480 764 aaKnown RBP21.79■■□□□ 1.08
TGFBRAP1-201ENST00000258449 SCAF1Q9H7N4 1312 aaKnown RBP21.75■■□□□ 1.07
TGFBRAP1-201ENST00000258449 CSRNP3Q8WYN3 585 aa21.72■■□□□ 1.07
TGFBRAP1-201ENST00000258449 WRNQ14191 1432 aaPredicted RBP eCLIP21.66■■□□□ 1.06
TGFBRAP1-201ENST00000258449 TNIKQ9UKE5 1360 aa21.66■■□□□ 1.06
TGFBRAP1-201ENST00000258449 BICRAQ9NZM4 1560 aa21.57■■□□□ 1.04
TGFBRAP1-201ENST00000258449 EEA1Q15075 1411 aa21.55■■□□□ 1.04
TGFBRAP1-201ENST00000258449 GOLGA3Q08378 1498 aa21.54■■□□□ 1.04
TGFBRAP1-201ENST00000258449 DIEXFQ68CQ4 756 aaKnown RBP21.53■■□□□ 1.04
TGFBRAP1-201ENST00000258449 RANGAP1P46060 587 aaPredicted RBP21.53■■□□□ 1.04
TGFBRAP1-201ENST00000258449 NEUROD1Q13562 356 aa21.47■■□□□ 1.03
TGFBRAP1-201ENST00000258449 SYNJ1O43426 1573 aa21.47■■□□□ 1.03
TGFBRAP1-201ENST00000258449 HNRNPUL2Q1KMD3 747 aaKnown RBP21.46■■□□□ 1.03
TGFBRAP1-201ENST00000258449 ACIN1Q9UKV3 1341 aaKnown RBP21.42■■□□□ 1.02
TGFBRAP1-201ENST00000258449 CEP164Q9UPV0 1460 aa21.38■■□□□ 1.01
TGFBRAP1-201ENST00000258449 CLIP1P30622 1438 aa21.37■■□□□ 1.01
TGFBRAP1-201ENST00000258449 ATAD2BQ9ULI0 1458 aa21.36■■□□□ 1.01
TGFBRAP1-201ENST00000258449 PEG3Q9GZU2 1588 aa21.36■■□□□ 1.01
TGFBRAP1-201ENST00000258449 BAZ1BQ9UIG0 1483 aaKnown RBP21.35■■□□□ 1.01
TGFBRAP1-201ENST00000258449 RAPGEF2Q9Y4G8 1499 aa21.31■■□□□ 1
TGFBRAP1-201ENST00000258449 ZNF316A6NFI3 1004 aaPredicted RBP21.28■■□□□ 1
TGFBRAP1-201ENST00000258449 KIF21BO75037 1637 aa21.28■■□□□ 1
TGFBRAP1-201ENST00000258449 GTF3C3Q9Y5Q9 886 aa21.27■■□□□ 1
TGFBRAP1-201ENST00000258449 APLP2Q06481 763 aa21.27■□□□□ 0.99
TGFBRAP1-201ENST00000258449 CENPBP07199 599 aaPredicted RBP21.25■□□□□ 0.99
TGFBRAP1-201ENST00000258449 YTHDC1Q96MU7 727 aaKnown RBP21.24■□□□□ 0.99
TGFBRAP1-201ENST00000258449 VPS8Q8N3P4 1428 aa21.23■□□□□ 0.99
TGFBRAP1-201ENST00000258449 PELP1Q8IZL8 1130 aaKnown RBP21.21■□□□□ 0.99
TGFBRAP1-201ENST00000258449 MIER1Q8N108 512 aa21.1■□□□□ 0.97
TGFBRAP1-201ENST00000258449 TOP2BQ02880 1626 aa21.08■□□□□ 0.97
TGFBRAP1-201ENST00000258449 KANK4Q5T7N3 995 aaPredicted RBP21.01■□□□□ 0.95
TGFBRAP1-201ENST00000258449 ARAP1Q96P48 1450 aa20.97■□□□□ 0.95
TGFBRAP1-201ENST00000258449 BIVM-ERCC5R4GMW8 1640 aa20.96■□□□□ 0.95
TGFBRAP1-201ENST00000258449 PRXQ9BXM0 1461 aa20.95■□□□□ 0.94
TGFBRAP1-201ENST00000258449 CUX1P39880 1505 aa20.94■□□□□ 0.94
TGFBRAP1-201ENST00000258449 ITGAEP38570 1179 aa20.9■□□□□ 0.94
TGFBRAP1-201ENST00000258449 ERICH3Q5RHP9 1530 aa20.89■□□□□ 0.93
TGFBRAP1-201ENST00000258449 DHX57Q6P158 1386 aaKnown RBP20.87■□□□□ 0.93
TGFBRAP1-201ENST00000258449 KIF27Q86VH2 1401 aa20.86■□□□□ 0.93
TGFBRAP1-201ENST00000258449 NCAPD3P42695 1498 aa20.84■□□□□ 0.93
TGFBRAP1-201ENST00000258449 HMGXB3Q12766 1538 aa20.81■□□□□ 0.92
TGFBRAP1-201ENST00000258449 ARHGAP35Q9NRY4 1499 aa20.76■□□□□ 0.91
TGFBRAP1-201ENST00000258449 CFTRP13569 1480 aa20.75■□□□□ 0.91
TGFBRAP1-201ENST00000258449 CUX2O14529 1486 aa20.71■□□□□ 0.91
TGFBRAP1-201ENST00000258449 RRBP1Q9P2E9 1410 aaKnown RBP20.71■□□□□ 0.91
TGFBRAP1-201ENST00000258449 CCNB3Q8WWL7 1395 aa20.71■□□□□ 0.91
TGFBRAP1-201ENST00000258449 CLSPNQ9HAW4 1339 aa20.69■□□□□ 0.9
TGFBRAP1-201ENST00000258449 P3H3Q8IVL6 736 aa20.65■□□□□ 0.9
TGFBRAP1-201ENST00000258449 IGF1RP08069 1367 aa20.64■□□□□ 0.9
TGFBRAP1-201ENST00000258449 ATP1B4Q9UN42 357 aaPredicted RBP20.64■□□□□ 0.89
TGFBRAP1-201ENST00000258449 CARMIL1Q5VZK9 1371 aa20.59■□□□□ 0.89
TGFBRAP1-201ENST00000258449 RAB3GAP2Q9H2M9 1393 aa20.59■□□□□ 0.89
TGFBRAP1-201ENST00000258449 FAM50AQ14320 339 aaKnown RBP20.57■□□□□ 0.88
TGFBRAP1-201ENST00000258449 FGD5Q6ZNL6 1462 aa20.56■□□□□ 0.88
TGFBRAP1-201ENST00000258449 CADPSQ9ULU8 1353 aa20.54■□□□□ 0.88
TGFBRAP1-201ENST00000258449 TIAM1Q13009 1591 aa20.52■□□□□ 0.88
TGFBRAP1-201ENST00000258449 PHLDB1Q86UU1 1377 aa20.51■□□□□ 0.87
TGFBRAP1-201ENST00000258449 KCNH8Q96L42 1107 aa20.49■□□□□ 0.87
TGFBRAP1-201ENST00000258449 SIN3AQ96ST3 1273 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms