RNA–Protein interactions for RNA: ENST00000319921.4

RNF213-201, Transcript of ring finger protein 213, humanhuman

TSL 1 (best) BASIC

Gene RNF213, Length 5,316 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-201ENST00000319921 DCAF8L2P0C7V8 631 aa20.93■□□□□ 0.94
RNF213-201ENST00000319921 NISCHQ9Y2I1 1504 aa20.49■□□□□ 0.87
RNF213-201ENST00000319921 SUPT5HO00267 1087 aaKnown RBP19.76■□□□□ 0.75
RNF213-201ENST00000319921 SHROOM4Q9ULL8 1493 aa19.37■□□□□ 0.69
RNF213-201ENST00000319921 FAM9AQ8IZU1 332 aaPredicted RBP19.31■□□□□ 0.68
RNF213-201ENST00000319921 APLP2Q06481 763 aa19.24■□□□□ 0.67
RNF213-201ENST00000319921 PELP1Q8IZL8 1130 aaKnown RBP19.18■□□□□ 0.66
RNF213-201ENST00000319921 EHMT2Q96KQ7 1210 aa18.78■□□□□ 0.6
RNF213-201ENST00000319921 ZEB1P37275 1124 aaPredicted RBP18.59■□□□□ 0.57
RNF213-201ENST00000319921 TRIM41Q8WV44 630 aa18.56■□□□□ 0.56
RNF213-201ENST00000319921 CENPBP07199 599 aaPredicted RBP18.32■□□□□ 0.52
RNF213-201ENST00000319921 UBTFP17480 764 aaKnown RBP18.32■□□□□ 0.52
RNF213-201ENST00000319921 CCER1Q8TC90 406 aaPredicted RBP18.32■□□□□ 0.52
RNF213-201ENST00000319921 ATP1B4Q9UN42 357 aaPredicted RBP18.27■□□□□ 0.52
RNF213-201ENST00000319921 PCGF6Q9BYE7 350 aa18.27■□□□□ 0.51
RNF213-201ENST00000319921 TTBK1Q5TCY1 1321 aaPredicted RBP18.2■□□□□ 0.5
RNF213-201ENST00000319921 RANGAP1P46060 587 aaPredicted RBP18.19■□□□□ 0.5
RNF213-201ENST00000319921 ERICH6Q7L0X2 663 aa18.07■□□□□ 0.48
RNF213-201ENST00000319921 NEFLP07196 543 aa18■□□□□ 0.47
RNF213-201ENST00000319921 TRIM26Q12899 539 aaPredicted RBP17.86■□□□□ 0.45
RNF213-201ENST00000319921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.77■□□□□ 0.44
RNF213-201ENST00000319921 HNRNPUL2Q1KMD3 747 aaKnown RBP17.77■□□□□ 0.44
RNF213-201ENST00000319921 MYT1LQ9UL68 1186 aa17.75■□□□□ 0.43
RNF213-201ENST00000319921 MYT1Q01538 1121 aa17.64■□□□□ 0.41
RNF213-201ENST00000319921 CHIC1Q5VXU3 224 aa17.57■□□□□ 0.4
RNF213-201ENST00000319921 ABCC9O60706 1549 aa17.53■□□□□ 0.4
RNF213-201ENST00000319921 ITGAEP38570 1179 aa17.51■□□□□ 0.39
RNF213-201ENST00000319921 YTHDC1Q96MU7 727 aaKnown RBP17.49■□□□□ 0.39
RNF213-201ENST00000319921 DAXXQ9UER7 740 aaPredicted RBP17.49■□□□□ 0.39
RNF213-201ENST00000319921 PPARGC1BQ86YN6 1023 aaKnown RBP17.45■□□□□ 0.38
RNF213-201ENST00000319921 POLR3GLQ9BT43 218 aa17.4■□□□□ 0.38
RNF213-201ENST00000319921 HRCP23327 699 aa17.39■□□□□ 0.37
RNF213-201ENST00000319921 PABPN1Q86U42 306 aaKnown RBP eCLIP17.33■□□□□ 0.36
RNF213-201ENST00000319921 LOC105371045A0A1W2PR82 267 aa17.3■□□□□ 0.36
RNF213-201ENST00000319921 FAM50AQ14320 339 aaKnown RBP17.28■□□□□ 0.36
RNF213-201ENST00000319921 TRIM52Q96A61 297 aa17.23■□□□□ 0.35
RNF213-201ENST00000319921 SLC4A1APQ9BWU0 796 aaKnown RBP17.22■□□□□ 0.35
RNF213-201ENST00000319921 CDK11AQ9UQ88 783 aaPredicted RBP17.11■□□□□ 0.33
RNF213-201ENST00000319921 DIEXFQ68CQ4 756 aaKnown RBP17.06■□□□□ 0.32
RNF213-201ENST00000319921 FBLN2P98095 1184 aa17.05■□□□□ 0.32
RNF213-201ENST00000319921 CLSPNQ9HAW4 1339 aa17.04■□□□□ 0.32
RNF213-201ENST00000319921 ZNF316A6NFI3 1004 aaPredicted RBP17.03■□□□□ 0.32
RNF213-201ENST00000319921 CSRNP3Q8WYN3 585 aa17.03■□□□□ 0.32
RNF213-201ENST00000319921 CCDC180Q9P1Z9 1646 aa17.03■□□□□ 0.32
RNF213-201ENST00000319921 ANP32CO43423 234 aa17.01■□□□□ 0.31
RNF213-201ENST00000319921 ZBTB47Q9UFB7 747 aaPredicted RBP16.98■□□□□ 0.31
RNF213-201ENST00000319921 NEFMP07197 916 aa16.97■□□□□ 0.31
RNF213-201ENST00000319921 ZCCHC6Q5VYS8 1495 aaKnown RBP16.96■□□□□ 0.31
RNF213-201ENST00000319921 NEUROD1Q13562 356 aa16.96■□□□□ 0.31
RNF213-201ENST00000319921 RTL5Q5HYW3 569 aaPredicted RBP16.96■□□□□ 0.31
RNF213-201ENST00000319921 SCRIBQ14160 1630 aa16.95■□□□□ 0.3
RNF213-201ENST00000319921 CNGB1Q14028 1251 aaPredicted RBP16.94■□□□□ 0.3
RNF213-201ENST00000319921 ZNF326Q5BKZ1 582 aaKnown RBP16.86■□□□□ 0.29
RNF213-201ENST00000319921 ESF1Q9H501 851 aaKnown RBP16.84■□□□□ 0.29
RNF213-201ENST00000319921 NPM1P06748 294 aaKnown RBP eCLIP16.83■□□□□ 0.28
RNF213-201ENST00000319921 ACIN1Q9UKV3 1341 aaKnown RBP16.8■□□□□ 0.28
RNF213-201ENST00000319921 RB1CC1Q8TDY2 1594 aa16.79■□□□□ 0.28
RNF213-201ENST00000319921 BCANQ96GW7 911 aa16.78■□□□□ 0.28
RNF213-201ENST00000319921 CANXP27824 592 aaKnown RBP16.76■□□□□ 0.27
RNF213-201ENST00000319921 ZNF777Q9ULD5 760 aaPredicted RBP16.73■□□□□ 0.27
RNF213-201ENST00000319921 P3H3Q8IVL6 736 aa16.73■□□□□ 0.27
RNF213-201ENST00000319921 TONSLQ96HA7 1378 aa16.68■□□□□ 0.26
RNF213-201ENST00000319921 EEA1Q15075 1411 aa16.65■□□□□ 0.26
RNF213-201ENST00000319921 STAG3Q9UJ98 1225 aa16.64■□□□□ 0.25
RNF213-201ENST00000319921 DCAF1Q9Y4B6 1507 aa16.63■□□□□ 0.25
RNF213-201ENST00000319921 NACADO15069 1562 aa16.62■□□□□ 0.25
RNF213-201ENST00000319921 SLC24A1O60721 1099 aa16.59■□□□□ 0.25
RNF213-201ENST00000319921 ARID3CA6NKF2 412 aa16.58■□□□□ 0.25
RNF213-201ENST00000319921 TSPY4P0CV99 314 aa16.57■□□□□ 0.24
RNF213-201ENST00000319921 TSPY10P0CW01 314 aa16.57■□□□□ 0.24
RNF213-201ENST00000319921 RSF1Q96T23 1441 aaPredicted RBP16.55■□□□□ 0.24
RNF213-201ENST00000319921 CHMP7Q8WUX9 453 aaPredicted RBP16.53■□□□□ 0.24
RNF213-201ENST00000319921 MTUS2Q5JR59 1369 aa16.53■□□□□ 0.24
RNF213-201ENST00000319921 ANP32AP39687 249 aaKnown RBP16.5■□□□□ 0.23
RNF213-201ENST00000319921 CHGAP10645 457 aaKnown RBP16.5■□□□□ 0.23
RNF213-201ENST00000319921 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.46■□□□□ 0.23
RNF213-201ENST00000319921 GTF3C3Q9Y5Q9 886 aa16.46■□□□□ 0.23
RNF213-201ENST00000319921 CLIP1P30622 1438 aa16.44■□□□□ 0.22
RNF213-201ENST00000319921 GOLGA3Q08378 1498 aa16.44■□□□□ 0.22
RNF213-201ENST00000319921 UPF2Q9HAU5 1272 aaKnown RBP16.43■□□□□ 0.22
RNF213-201ENST00000319921 BAZ1BQ9UIG0 1483 aaKnown RBP16.41■□□□□ 0.22
RNF213-201ENST00000319921 PLEKHD1A6NEE1 506 aa16.37■□□□□ 0.21
RNF213-201ENST00000319921 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
RNF213-201ENST00000319921 WDR43Q15061 677 aaKnown RBP eCLIP16.36■□□□□ 0.213e-6■■■■□ 20.8
RNF213-201ENST00000319921 ANP32BQ92688 251 aaKnown RBP16.35■□□□□ 0.21
RNF213-201ENST00000319921 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.34■□□□□ 0.217e-7■■□□□ 13.9
RNF213-201ENST00000319921 WRNQ14191 1432 aaPredicted RBP eCLIP16.33■□□□□ 0.21
RNF213-201ENST00000319921 TMC1Q8TDI8 760 aa16.33■□□□□ 0.21
RNF213-201ENST00000319921 CDCA8Q53HL2 280 aa16.31■□□□□ 0.2
RNF213-201ENST00000319921 CHIC2Q9UKJ5 165 aa16.31■□□□□ 0.2
RNF213-201ENST00000319921 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
RNF213-201ENST00000319921 CEP164Q9UPV0 1460 aa16.3■□□□□ 0.2
RNF213-201ENST00000319921 HNRNPUQ00839 825 aaKnown RBP eCLIP16.28■□□□□ 0.2
RNF213-201ENST00000319921 HSP90AA1P07900 732 aaKnown RBP16.28■□□□□ 0.2
RNF213-201ENST00000319921 EIF4G2P78344 907 aaKnown RBP eCLIP16.26■□□□□ 0.196e-8■■■■■ 38.1
RNF213-201ENST00000319921 EIF5BO60841 1220 aaKnown RBP16.23■□□□□ 0.19
RNF213-201ENST00000319921 TNIKQ9UKE5 1360 aa16.23■□□□□ 0.19
RNF213-201ENST00000319921 PPP1R15AO75807 674 aaPredicted RBP16.23■□□□□ 0.19
RNF213-201ENST00000319921 DDX10Q13206 875 aaKnown RBP16.23■□□□□ 0.19
RNF213-201ENST00000319921 MYH16Q9H6N6 1097 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms