RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 AEBP2Q6ZN18 517 aaPredicted RBP26.46■■□□□ 1.83
CHD8-207ENST00000554384 CHIC1Q5VXU3 224 aa25.02■■□□□ 1.6
CHD8-207ENST00000554384 SENP3Q9H4L4 574 aaPredicted RBP22.45■■□□□ 1.18
CHD8-207ENST00000554384 PHF23Q9BUL5 403 aaPredicted RBP22.23■■□□□ 1.15
CHD8-207ENST00000554384 FOXD1Q16676 465 aa21.02■□□□□ 0.96
CHD8-207ENST00000554384 POTEDQ86YR6 584 aa20.49■□□□□ 0.87
CHD8-207ENST00000554384 PLPPR3Q6T4P5 718 aa19.93■□□□□ 0.78
CHD8-207ENST00000554384 PPP6R1Q9UPN7 881 aa19.68■□□□□ 0.74
CHD8-207ENST00000554384 MSH5O43196 834 aa19.59■□□□□ 0.73
CHD8-207ENST00000554384 ADRA2BP18089 450 aa19.58■□□□□ 0.72
CHD8-207ENST00000554384 PIAS4Q8N2W9 510 aaPredicted RBP19.58■□□□□ 0.72
CHD8-207ENST00000554384 MAPK8IP2Q13387 824 aaPredicted RBP18.03■□□□□ 0.48
CHD8-207ENST00000554384 DMRT2Q9Y5R5 561 aa17.83■□□□□ 0.44
CHD8-207ENST00000554384 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
CHD8-207ENST00000554384 PPP4R3CPQ6ZMV5 832 aa17.51■□□□□ 0.39
CHD8-207ENST00000554384 KCNA4P22459 653 aa17.17■□□□□ 0.34
CHD8-207ENST00000554384 HOXD11P31277 338 aaPredicted RBP17.17■□□□□ 0.34
CHD8-207ENST00000554384 CNKSR2Q8WXI2 1034 aa17.15■□□□□ 0.34
CHD8-207ENST00000554384 CACNB1Q02641 598 aaPredicted RBP17.11■□□□□ 0.33
CHD8-207ENST00000554384 DCAF8L1A6NGE4 600 aa17.1■□□□□ 0.33
CHD8-207ENST00000554384 RNF216Q9NWF9 866 aaPredicted RBP17.02■□□□□ 0.32
CHD8-207ENST00000554384 RNF39Q9H2S5 420 aa16.76■□□□□ 0.27
CHD8-207ENST00000554384 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
CHD8-207ENST00000554384 NPM3O75607 178 aaKnown RBP16.6■□□□□ 0.25
CHD8-207ENST00000554384 DNAJC5BQ9UF47 199 aa16.52■□□□□ 0.24
CHD8-207ENST00000554384 C1QBPQ07021 282 aaKnown RBP16.48■□□□□ 0.23
CHD8-207ENST00000554384 EHMT2Q96KQ7 1210 aa16.46■□□□□ 0.23
CHD8-207ENST00000554384 SLC4A1APQ9BWU0 796 aaKnown RBP16.35■□□□□ 0.21
CHD8-207ENST00000554384 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.33■□□□□ 0.21e-6■■■□□ 19
CHD8-207ENST00000554384 CSRNP3Q8WYN3 585 aa16.05■□□□□ 0.16
CHD8-207ENST00000554384 U3KPZ7 1027 aaPredicted RBP16.03■□□□□ 0.16
CHD8-207ENST00000554384 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
CHD8-207ENST00000554384 ZBTB22O15209 634 aa15.85■□□□□ 0.13
CHD8-207ENST00000554384 POTEHQ6S545 545 aa15.85■□□□□ 0.13
CHD8-207ENST00000554384 SPINK5Q9NQ38 1064 aaPredicted RBP15.84■□□□□ 0.13
CHD8-207ENST00000554384 CAPN15O75808 1086 aa15.75■□□□□ 0.11
CHD8-207ENST00000554384 DSG3P32926 999 aa15.7■□□□□ 0.1
CHD8-207ENST00000554384 FOXD4L1Q9NU39 408 aa15.56■□□□□ 0.08
CHD8-207ENST00000554384 TRHP20396 242 aaPredicted RBP15.51■□□□□ 0.07
CHD8-207ENST00000554384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.45■□□□□ 0.06
CHD8-207ENST00000554384 HNRNPUL2Q1KMD3 747 aaKnown RBP15.45■□□□□ 0.06
CHD8-207ENST00000554384 ABCB7O75027 752 aa15.43■□□□□ 0.06
CHD8-207ENST00000554384 APLP2Q06481 763 aa15.43■□□□□ 0.06
CHD8-207ENST00000554384 ZNF219Q9P2Y4 722 aaPredicted RBP15.42■□□□□ 0.06
CHD8-207ENST00000554384 SAMD1Q6SPF0 538 aaPredicted RBP15.39■□□□□ 0.05
CHD8-207ENST00000554384 MYCNP04198 464 aaPredicted RBP15.29■□□□□ 0.04
CHD8-207ENST00000554384 POLA2Q14181 598 aa15.1■□□□□ 0.01
CHD8-207ENST00000554384 ATF5Q9Y2D1 282 aaPredicted RBP15.06■□□□□ 0
CHD8-207ENST00000554384 ATXN8OSP0DMR3 200 aa14.9□□□□□ -0.02
CHD8-207ENST00000554384 RBM42Q9BTD8 480 aaKnown RBP14.89□□□□□ -0.03
CHD8-207ENST00000554384 ZBTB12Q9Y330 459 aaPredicted RBP14.67□□□□□ -0.06
CHD8-207ENST00000554384 CHRDL2Q6WN34 429 aa14.64□□□□□ -0.07
CHD8-207ENST00000554384 OSCARQ8IYS5 282 aa14.61□□□□□ -0.07
CHD8-207ENST00000554384 AKT1S1Q96B36 256 aa14.57□□□□□ -0.08
CHD8-207ENST00000554384 REM2Q8IYK8 340 aaPredicted RBP14.48□□□□□ -0.09
CHD8-207ENST00000554384 FKBP8Q14318 412 aa14.46□□□□□ -0.09
CHD8-207ENST00000554384 SP7Q8TDD2 431 aaPredicted RBP14.4□□□□□ -0.1
CHD8-207ENST00000554384 MKRN4PQ13434 485 aaPredicted RBP14.34□□□□□ -0.11
CHD8-207ENST00000554384 PITPNM1O00562 1244 aa14.33□□□□□ -0.12
CHD8-207ENST00000554384 FBLN2P98095 1184 aa14.33□□□□□ -0.12
CHD8-207ENST00000554384 PIP4P2Q8N4L2 257 aa14.31□□□□□ -0.12
CHD8-207ENST00000554384 SPDYE2BA6NHP3 402 aa14.27□□□□□ -0.13
CHD8-207ENST00000554384 SPDYE6P0CI01 402 aa14.27□□□□□ -0.13
CHD8-207ENST00000554384 SPDYE2Q495Y8 402 aa14.27□□□□□ -0.13
CHD8-207ENST00000554384 FXR2P51116 673 aaKnown RBP eCLIP14.21□□□□□ -0.131e-6■■■■■ 32.6
CHD8-207ENST00000554384 ZNF692Q9BU19 519 aaPredicted RBP14.13□□□□□ -0.15
CHD8-207ENST00000554384 SSUH2Q9Y2M2 353 aa14.11□□□□□ -0.15
CHD8-207ENST00000554384 CLEC11AQ9Y240 323 aa14.05□□□□□ -0.16
CHD8-207ENST00000554384 HAX1O00165 279 aa14.04□□□□□ -0.16
CHD8-207ENST00000554384 SPDYE1Q8NFV5 336 aaPredicted RBP14.02□□□□□ -0.17
CHD8-207ENST00000554384 SPDYE4A6NLX3 237 aa14.01□□□□□ -0.17
CHD8-207ENST00000554384 EVX2Q03828 476 aa13.96□□□□□ -0.17
CHD8-207ENST00000554384 PRKAR2AP13861 404 aaKnown RBP13.95□□□□□ -0.18
CHD8-207ENST00000554384 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
CHD8-207ENST00000554384 RTN4Q9NQC3 1192 aaKnown RBP13.93□□□□□ -0.18
CHD8-207ENST00000554384 CHADLQ6NUI6 762 aa13.84□□□□□ -0.19
CHD8-207ENST00000554384 PRR29P0C7W0 189 aa13.79□□□□□ -0.2
CHD8-207ENST00000554384 PROM2Q8N271 834 aa13.79□□□□□ -0.2
CHD8-207ENST00000554384 AMER1Q5JTC6 1135 aaPredicted RBP13.76□□□□□ -0.21
CHD8-207ENST00000554384 C19orf67A6NJJ6 358 aa13.75□□□□□ -0.21
CHD8-207ENST00000554384 FBXO3Q9UK99 471 aa13.68□□□□□ -0.22
CHD8-207ENST00000554384 VASPP50552 380 aaPredicted RBP13.59□□□□□ -0.23
CHD8-207ENST00000554384 GABBR2O75899 941 aa13.58□□□□□ -0.24
CHD8-207ENST00000554384 FARP1Q9Y4F1 1045 aaPredicted RBP13.58□□□□□ -0.24
CHD8-207ENST00000554384 CD44P16070 742 aaKnown RBP13.49□□□□□ -0.25
CHD8-207ENST00000554384 LHX8Q68G74 356 aa13.49□□□□□ -0.25
CHD8-207ENST00000554384 IFNLR1Q8IU57 520 aaPredicted RBP13.49□□□□□ -0.25
CHD8-207ENST00000554384 CREBZFQ9NS37 354 aa13.49□□□□□ -0.25
CHD8-207ENST00000554384 STAG3Q9UJ98 1225 aa13.47□□□□□ -0.25
CHD8-207ENST00000554384 PLSCR2Q9NRY7 297 aa13.41□□□□□ -0.26
CHD8-207ENST00000554384 POTEIP0CG38 1075 aa13.34□□□□□ -0.27
CHD8-207ENST00000554384 ZRANB1Q9UGI0 708 aa13.31□□□□□ -0.28
CHD8-207ENST00000554384 MNX1P50219 401 aaPredicted RBP13.28□□□□□ -0.28
CHD8-207ENST00000554384 KLHL34Q8N239 644 aa13.28□□□□□ -0.28
CHD8-207ENST00000554384 ZNF579Q8NAF0 562 aaKnown RBP13.28□□□□□ -0.28
CHD8-207ENST00000554384 MIER1Q8N108 512 aa13.26□□□□□ -0.29
CHD8-207ENST00000554384 PLCD3Q8N3E9 789 aa13.25□□□□□ -0.29
CHD8-207ENST00000554384 CLCN6P51797 869 aa13.23□□□□□ -0.29
CHD8-207ENST00000554384 PKD2Q13563 968 aa13.2□□□□□ -0.3
CHD8-207ENST00000554384 SPOCK2Q92563 424 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms