RNA–Protein interactions for RNA: ENST00000468674.5

PKD1-204, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 490 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-204ENST00000468674 NISCHQ9Y2I1 1504 aa41.77■■■■■ 4.28
PKD1-204ENST00000468674 CCDC180Q9P1Z9 1646 aa36.97■■■■□ 3.51
PKD1-204ENST00000468674 ABCC9O60706 1549 aa35.93■■■■□ 3.34
PKD1-204ENST00000468674 ZCCHC6Q5VYS8 1495 aaKnown RBP34.87■■■■□ 3.17
PKD1-204ENST00000468674 DCAF8L2P0C7V8 631 aa34.81■■■■□ 3.16
PKD1-204ENST00000468674 NACADO15069 1562 aa34.66■■■■□ 3.14
PKD1-204ENST00000468674 RB1CC1Q8TDY2 1594 aa34.64■■■■□ 3.14
PKD1-204ENST00000468674 DCAF1Q9Y4B6 1507 aa34.52■■■■□ 3.12
PKD1-204ENST00000468674 MYO15BQ96JP2 1530 aa34.51■■■■□ 3.12
PKD1-204ENST00000468674 UNC13AQ9UPW8 1703 aa33.9■■■■□ 3.02
PKD1-204ENST00000468674 SCRIBQ14160 1630 aa33.84■■■■□ 3.01
PKD1-204ENST00000468674 PABPN1Q86U42 306 aaKnown RBP eCLIP33.63■■■□□ 2.97
PKD1-204ENST00000468674 BICRAQ9NZM4 1560 aa33.62■■■□□ 2.97
PKD1-204ENST00000468674 SHROOM4Q9ULL8 1493 aa33.3■■■□□ 2.92
PKD1-204ENST00000468674 EIF4G1Q04637 1599 aaKnown RBP32.69■■■□□ 2.82
PKD1-204ENST00000468674 DNAJC5BQ9UF47 199 aa32.65■■■□□ 2.82
PKD1-204ENST00000468674 CECR2Q9BXF3 1484 aa32.54■■■□□ 2.8
PKD1-204ENST00000468674 CC2D2AQ9P2K1 1620 aa32.48■■■□□ 2.79
PKD1-204ENST00000468674 SMARCA4P51532 1647 aa32.36■■■□□ 2.77
PKD1-204ENST00000468674 BAZ1AQ9NRL2 1556 aaPredicted RBP32.34■■■□□ 2.77
PKD1-204ENST00000468674 MROH2BQ7Z745 1585 aa32.24■■■□□ 2.75
PKD1-204ENST00000468674 ATAD2BQ9ULI0 1458 aa32.08■■■□□ 2.73
PKD1-204ENST00000468674 SMARCA2P51531 1590 aa32.04■■■□□ 2.72
PKD1-204ENST00000468674 PEG3Q9GZU2 1588 aa31.98■■■□□ 2.71
PKD1-204ENST00000468674 NCAPD3P42695 1498 aa31.98■■■□□ 2.71
PKD1-204ENST00000468674 RSF1Q96T23 1441 aaPredicted RBP31.96■■■□□ 2.71
PKD1-204ENST00000468674 WIZO95785 1651 aa31.92■■■□□ 2.7
PKD1-204ENST00000468674 HMGXB3Q12766 1538 aa31.86■■■□□ 2.69
PKD1-204ENST00000468674 BAZ1BQ9UIG0 1483 aaKnown RBP31.84■■■□□ 2.69
PKD1-204ENST00000468674 TOP2AP11388 1531 aaKnown RBP31.56■■■□□ 2.64
PKD1-204ENST00000468674 SUPT5HO00267 1087 aaKnown RBP31.45■■■□□ 2.63
PKD1-204ENST00000468674 CCDC88BA6NC98 1476 aa31.2■■■□□ 2.58
PKD1-204ENST00000468674 NESP48681 1621 aa31.2■■■□□ 2.58
PKD1-204ENST00000468674 LAMC3Q9Y6N6 1575 aa31.09■■■□□ 2.57
PKD1-204ENST00000468674 CADPSQ9ULU8 1353 aa31.07■■■□□ 2.56
PKD1-204ENST00000468674 CFTRP13569 1480 aa30.96■■■□□ 2.55
PKD1-204ENST00000468674 ERCC6Q03468 1493 aa30.9■■■□□ 2.54
PKD1-204ENST00000468674 PDS5BQ9NTI5 1447 aa30.86■■■□□ 2.53
PKD1-204ENST00000468674 KIF21AQ7Z4S6 1674 aa30.83■■■□□ 2.53
PKD1-204ENST00000468674 PRDM2Q13029 1718 aa30.78■■■□□ 2.52
PKD1-204ENST00000468674 FANCD2Q9BXW9 1451 aa30.75■■■□□ 2.51
PKD1-204ENST00000468674 CEP164Q9UPV0 1460 aa30.69■■■□□ 2.5
PKD1-204ENST00000468674 THOC2Q8NI27 1593 aaKnown RBP30.62■■■□□ 2.49
PKD1-204ENST00000468674 MRC2Q9UBG0 1479 aa30.57■■■□□ 2.48
PKD1-204ENST00000468674 WDR62O43379 1518 aa30.45■■■□□ 2.47
PKD1-204ENST00000468674 URB2Q14146 1524 aaKnown RBP30.44■■■□□ 2.46
PKD1-204ENST00000468674 CUX2O14529 1486 aa30.41■■■□□ 2.46
PKD1-204ENST00000468674 TOPBP1Q92547 1522 aa30.3■■■□□ 2.44
PKD1-204ENST00000468674 DNMBPQ6XZF7 1577 aa30.29■■■□□ 2.44
PKD1-204ENST00000468674 ABCC8Q09428 1581 aa30.24■■■□□ 2.43
PKD1-204ENST00000468674 CUX1P39880 1505 aa30.22■■■□□ 2.43
PKD1-204ENST00000468674 WRNQ14191 1432 aaPredicted RBP eCLIP30.13■■■□□ 2.41
PKD1-204ENST00000468674 SYNJ1O43426 1573 aa30.07■■■□□ 2.4
PKD1-204ENST00000468674 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
PKD1-204ENST00000468674 FGD5Q6ZNL6 1462 aa30.06■■■□□ 2.4
PKD1-204ENST00000468674 BIVM-ERCC5R4GMW8 1640 aa30.03■■■□□ 2.4
PKD1-204ENST00000468674 TOP2BQ02880 1626 aa30.02■■■□□ 2.4
PKD1-204ENST00000468674 IFT140Q96RY7 1462 aa29.99■■■□□ 2.39
PKD1-204ENST00000468674 RAD54L2Q9Y4B4 1467 aa29.96■■■□□ 2.39
PKD1-204ENST00000468674 TARBP1Q13395 1621 aaKnown RBP29.95■■■□□ 2.38
PKD1-204ENST00000468674 SOGA1O94964 1423 aa29.94■■■□□ 2.38
PKD1-204ENST00000468674 ZNF608Q9ULD9 1512 aaPredicted RBP29.89■■■□□ 2.38
PKD1-204ENST00000468674 WDR97A6NE52 1622 aa29.8■■■□□ 2.36
PKD1-204ENST00000468674 EIF4G3O43432 1585 aaKnown RBP29.78■■■□□ 2.36
PKD1-204ENST00000468674 TDRD9Q8NDG6 1382 aaKnown RBP29.76■■■□□ 2.35
PKD1-204ENST00000468674 AQRO60306 1485 aaKnown RBP eCLIP29.75■■■□□ 2.35
PKD1-204ENST00000468674 ABCA10Q8WWZ4 1543 aa29.74■■■□□ 2.35
PKD1-204ENST00000468674 TRIM41Q8WV44 630 aa29.64■■■□□ 2.34
PKD1-204ENST00000468674 ABCA5Q8WWZ7 1642 aa29.63■■■□□ 2.33
PKD1-204ENST00000468674 GAPVD1Q14C86 1478 aa29.6■■■□□ 2.33
PKD1-204ENST00000468674 PBRM1Q86U86 1689 aa29.55■■■□□ 2.32
PKD1-204ENST00000468674 GRIN2BQ13224 1484 aa29.54■■■□□ 2.32
PKD1-204ENST00000468674 CHIC1Q5VXU3 224 aa29.51■■■□□ 2.31
PKD1-204ENST00000468674 SNAPC4Q5SXM2 1469 aa29.49■■■□□ 2.31
PKD1-204ENST00000468674 KIF27Q86VH2 1401 aa29.45■■■□□ 2.3
PKD1-204ENST00000468674 MAGI1Q96QZ7 1491 aaPredicted RBP29.41■■■□□ 2.3
PKD1-204ENST00000468674 ERICH3Q5RHP9 1530 aa29.39■■■□□ 2.3
PKD1-204ENST00000468674 RUSC2Q8N2Y8 1516 aa29.36■■■□□ 2.29
PKD1-204ENST00000468674 CHD1O14646 1710 aa29.35■■■□□ 2.29
PKD1-204ENST00000468674 FBLN2P98095 1184 aa29.33■■■□□ 2.29
PKD1-204ENST00000468674 ADAMTS12P58397 1594 aa29.33■■■□□ 2.29
PKD1-204ENST00000468674 SYNJ2O15056 1496 aa29.31■■■□□ 2.28
PKD1-204ENST00000468674 IGF1RP08069 1367 aa29.28■■■□□ 2.28
PKD1-204ENST00000468674 CHMP7Q8WUX9 453 aaPredicted RBP29.26■■■□□ 2.27
PKD1-204ENST00000468674 FHAD1B1AJZ9 1412 aa29.25■■■□□ 2.27
PKD1-204ENST00000468674 OSCARQ8IYS5 282 aa29.21■■■□□ 2.27
PKD1-204ENST00000468674 CUL7Q14999 1698 aa29.2■■■□□ 2.26
PKD1-204ENST00000468674 GRIN2AQ12879 1464 aa29.17■■■□□ 2.26
PKD1-204ENST00000468674 CARMIL1Q5VZK9 1371 aa29.13■■■□□ 2.25
PKD1-204ENST00000468674 FAM9AQ8IZU1 332 aaPredicted RBP29.1■■■□□ 2.25
PKD1-204ENST00000468674 DNAJC5Q9H3Z4 198 aa29.08■■■□□ 2.25
PKD1-204ENST00000468674 EEA1Q15075 1411 aa29.08■■■□□ 2.25
PKD1-204ENST00000468674 CEP170Q5SW79 1584 aa29.05■■■□□ 2.24
PKD1-204ENST00000468674 CSRNP3Q8WYN3 585 aa29.02■■■□□ 2.24
PKD1-204ENST00000468674 NUP160Q12769 1436 aa29.02■■■□□ 2.24
PKD1-204ENST00000468674 CLASP1Q7Z460 1538 aa29.01■■■□□ 2.23
PKD1-204ENST00000468674 RAPGEF2Q9Y4G8 1499 aa28.99■■■□□ 2.23
PKD1-204ENST00000468674 PRXQ9BXM0 1461 aa28.97■■■□□ 2.23
PKD1-204ENST00000468674 KIAA0586Q9BVV6 1533 aa28.82■■■□□ 2.2
PKD1-204ENST00000468674 KIF21BO75037 1637 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms