RNA–Protein interactions for RNA: ENST00000616255.1

UHRF1-204, Transcript of ubiquitin like with PHD and ring finger domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UHRF1, Length 2,661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UHRF1-204ENST00000616255 NISCHQ9Y2I1 1504 aa28.23■■■□□ 2.11
UHRF1-204ENST00000616255 HRCP23327 699 aa25.07■■□□□ 1.6
UHRF1-204ENST00000616255 PELP1Q8IZL8 1130 aaKnown RBP24.71■■□□□ 1.55
UHRF1-204ENST00000616255 PPARGC1BQ86YN6 1023 aaKnown RBP24.41■■□□□ 1.5
UHRF1-204ENST00000616255 PCGF6Q9BYE7 350 aa24.35■■□□□ 1.49
UHRF1-204ENST00000616255 SHROOM4Q9ULL8 1493 aa24.29■■□□□ 1.48
UHRF1-204ENST00000616255 CCDC180Q9P1Z9 1646 aa24.28■■□□□ 1.48
UHRF1-204ENST00000616255 MYO15BQ96JP2 1530 aa24.14■■□□□ 1.45
UHRF1-204ENST00000616255 SUPT5HO00267 1087 aaKnown RBP24.13■■□□□ 1.45
UHRF1-204ENST00000616255 CHIC1Q5VXU3 224 aa23.91■■□□□ 1.42
UHRF1-204ENST00000616255 MYT1Q01538 1121 aa23.88■■□□□ 1.41
UHRF1-204ENST00000616255 ZCCHC6Q5VYS8 1495 aaKnown RBP23.87■■□□□ 1.41
UHRF1-204ENST00000616255 DCAF1Q9Y4B6 1507 aa23.83■■□□□ 1.41
UHRF1-204ENST00000616255 SCAF1Q9H7N4 1312 aaKnown RBP23.82■■□□□ 1.4
UHRF1-204ENST00000616255 TRIM26Q12899 539 aaPredicted RBP23.58■■□□□ 1.37
UHRF1-204ENST00000616255 ZEB1P37275 1124 aaPredicted RBP23.56■■□□□ 1.36
UHRF1-204ENST00000616255 LOC105371045A0A1W2PR82 267 aa23.3■■□□□ 1.32
UHRF1-204ENST00000616255 ACIN1Q9UKV3 1341 aaKnown RBP23.2■■□□□ 1.3
UHRF1-204ENST00000616255 DCAF8L2P0C7V8 631 aa23.2■■□□□ 1.3
UHRF1-204ENST00000616255 NEUROD1Q13562 356 aa23.06■■□□□ 1.28
UHRF1-204ENST00000616255 GTF3C3Q9Y5Q9 886 aa22.99■■□□□ 1.27
UHRF1-204ENST00000616255 CENPBP07199 599 aaPredicted RBP22.92■■□□□ 1.26
UHRF1-204ENST00000616255 DIEXFQ68CQ4 756 aaKnown RBP22.65■■□□□ 1.22
UHRF1-204ENST00000616255 TTBK1Q5TCY1 1321 aaPredicted RBP22.49■■□□□ 1.19
UHRF1-204ENST00000616255 ABCC9O60706 1549 aa22.49■■□□□ 1.19
UHRF1-204ENST00000616255 CCER1Q8TC90 406 aaPredicted RBP22.48■■□□□ 1.19
UHRF1-204ENST00000616255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.46■■□□□ 1.19
UHRF1-204ENST00000616255 NACADO15069 1562 aa22.44■■□□□ 1.18
UHRF1-204ENST00000616255 SCRIBQ14160 1630 aa22.42■■□□□ 1.18
UHRF1-204ENST00000616255 EHMT2Q96KQ7 1210 aa22.39■■□□□ 1.17
UHRF1-204ENST00000616255 TRIM41Q8WV44 630 aa22.34■■□□□ 1.17
UHRF1-204ENST00000616255 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
UHRF1-204ENST00000616255 YTHDC1Q96MU7 727 aaKnown RBP22.24■■□□□ 1.15
UHRF1-204ENST00000616255 RSF1Q96T23 1441 aaPredicted RBP22.18■■□□□ 1.14
UHRF1-204ENST00000616255 ZNF316A6NFI3 1004 aaPredicted RBP22.16■■□□□ 1.14
UHRF1-204ENST00000616255 BCL11AQ9H165 835 aa22.15■■□□□ 1.14
UHRF1-204ENST00000616255 RB1CC1Q8TDY2 1594 aa22.07■■□□□ 1.12
UHRF1-204ENST00000616255 ANP32EQ9BTT0 268 aa22.04■■□□□ 1.12
UHRF1-204ENST00000616255 MIER1Q8N108 512 aa22■■□□□ 1.11
UHRF1-204ENST00000616255 CLSPNQ9HAW4 1339 aa21.94■■□□□ 1.1
UHRF1-204ENST00000616255 CECR2Q9BXF3 1484 aa21.87■■□□□ 1.09
UHRF1-204ENST00000616255 MROH2BQ7Z745 1585 aa21.84■■□□□ 1.09
UHRF1-204ENST00000616255 SUPT16HQ9Y5B9 1047 aaKnown RBP21.83■■□□□ 1.09
UHRF1-204ENST00000616255 TSHZ2Q9NRE2 1034 aa21.82■■□□□ 1.08
UHRF1-204ENST00000616255 WRNQ14191 1432 aaPredicted RBP eCLIP21.76■■□□□ 1.07
UHRF1-204ENST00000616255 CSRNP3Q8WYN3 585 aa21.74■■□□□ 1.07
UHRF1-204ENST00000616255 BAZ1AQ9NRL2 1556 aaPredicted RBP21.74■■□□□ 1.07
UHRF1-204ENST00000616255 WIZO95785 1651 aa21.69■■□□□ 1.06
UHRF1-204ENST00000616255 UNC13AQ9UPW8 1703 aa21.64■■□□□ 1.05
UHRF1-204ENST00000616255 SMARCA4P51532 1647 aa21.55■■□□□ 1.04
UHRF1-204ENST00000616255 CEP162Q5TB80 1403 aa21.52■■□□□ 1.04
UHRF1-204ENST00000616255 TOP2AP11388 1531 aaKnown RBP21.5■■□□□ 1.03
UHRF1-204ENST00000616255 EIF4G1Q04637 1599 aaKnown RBP21.46■■□□□ 1.03
UHRF1-204ENST00000616255 PRKCSHP14314 528 aaPredicted RBP21.4■■□□□ 1.02
UHRF1-204ENST00000616255 BICRAQ9NZM4 1560 aa21.4■■□□□ 1.02
UHRF1-204ENST00000616255 TNIKQ9UKE5 1360 aa21.37■■□□□ 1.01
UHRF1-204ENST00000616255 HNRNPUL2Q1KMD3 747 aaKnown RBP21.36■■□□□ 1.01
UHRF1-204ENST00000616255 SMARCA2P51531 1590 aa21.32■■□□□ 1
UHRF1-204ENST00000616255 CCDC88BA6NC98 1476 aa21.29■■□□□ 1
UHRF1-204ENST00000616255 RBM19Q9Y4C8 960 aaKnown RBP21.28■■□□□ 1
UHRF1-204ENST00000616255 PEG3Q9GZU2 1588 aa21.27■■□□□ 1
UHRF1-204ENST00000616255 BCANQ96GW7 911 aa21.27■■□□□ 1
UHRF1-204ENST00000616255 FKBP8Q14318 412 aa21.19■□□□□ 0.98
UHRF1-204ENST00000616255 ABCC8Q09428 1581 aa21.16■□□□□ 0.98
UHRF1-204ENST00000616255 PABPN1Q86U42 306 aaKnown RBP eCLIP21.16■□□□□ 0.98
UHRF1-204ENST00000616255 UBTFP17480 764 aaKnown RBP21.16■□□□□ 0.98
UHRF1-204ENST00000616255 EEA1Q15075 1411 aa21.12■□□□□ 0.97
UHRF1-204ENST00000616255 SOGA1O94964 1423 aa21.11■□□□□ 0.97
UHRF1-204ENST00000616255 MSH5O43196 834 aa21.08■□□□□ 0.97
UHRF1-204ENST00000616255 GOLGA3Q08378 1498 aa21.08■□□□□ 0.96
UHRF1-204ENST00000616255 ERICH6Q7L0X2 663 aa21.08■□□□□ 0.96
UHRF1-204ENST00000616255 NEFLP07196 543 aa21.07■□□□□ 0.96
UHRF1-204ENST00000616255 DHX57Q6P158 1386 aaKnown RBP21.04■□□□□ 0.96
UHRF1-204ENST00000616255 KCNH8Q96L42 1107 aa21.02■□□□□ 0.96
UHRF1-204ENST00000616255 RUSC2Q8N2Y8 1516 aa21.01■□□□□ 0.95
UHRF1-204ENST00000616255 ATAD2BQ9ULI0 1458 aa21.01■□□□□ 0.95
UHRF1-204ENST00000616255 MYT1LQ9UL68 1186 aa20.99■□□□□ 0.95
UHRF1-204ENST00000616255 FANCIQ9NVI1 1328 aa20.98■□□□□ 0.95
UHRF1-204ENST00000616255 ITGAEP38570 1179 aa20.94■□□□□ 0.94
UHRF1-204ENST00000616255 APLP2Q06481 763 aa20.94■□□□□ 0.94
UHRF1-204ENST00000616255 BAZ1BQ9UIG0 1483 aaKnown RBP20.93■□□□□ 0.94
UHRF1-204ENST00000616255 VPS8Q8N3P4 1428 aa20.93■□□□□ 0.94
UHRF1-204ENST00000616255 CLIP1P30622 1438 aa20.89■□□□□ 0.94
UHRF1-204ENST00000616255 RANGAP1P46060 587 aaPredicted RBP20.89■□□□□ 0.93
UHRF1-204ENST00000616255 DEKP35659 375 aaKnown RBP20.84■□□□□ 0.93
UHRF1-204ENST00000616255 CEP164Q9UPV0 1460 aa20.83■□□□□ 0.93
UHRF1-204ENST00000616255 KIF21BO75037 1637 aa20.8■□□□□ 0.92
UHRF1-204ENST00000616255 CDK11AQ9UQ88 783 aaPredicted RBP20.78■□□□□ 0.92
UHRF1-204ENST00000616255 HMGXB3Q12766 1538 aa20.75■□□□□ 0.91
UHRF1-204ENST00000616255 SYNJ1O43426 1573 aa20.74■□□□□ 0.91
UHRF1-204ENST00000616255 TRIM52Q96A61 297 aa20.72■□□□□ 0.91
UHRF1-204ENST00000616255 NCAPD3P42695 1498 aa20.72■□□□□ 0.91
UHRF1-204ENST00000616255 DDX10Q13206 875 aaKnown RBP20.71■□□□□ 0.91
UHRF1-204ENST00000616255 ANO8Q9HCE9 1232 aaPredicted RBP20.7■□□□□ 0.9
UHRF1-204ENST00000616255 CCER2I3L3R5 266 aa20.69■□□□□ 0.9
UHRF1-204ENST00000616255 CUX2O14529 1486 aa20.66■□□□□ 0.9
UHRF1-204ENST00000616255 ERICH6BQ5W0A0 696 aa20.63■□□□□ 0.89
UHRF1-204ENST00000616255 TOP2BQ02880 1626 aa20.61■□□□□ 0.89
UHRF1-204ENST00000616255 PPP1R15AO75807 674 aaPredicted RBP20.61■□□□□ 0.89
UHRF1-204ENST00000616255 ANP32CO43423 234 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms