RNA–Protein interactions for RNA: ENST00000454453.5

NEK6-211, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-211ENST00000454453 NISCHQ9Y2I1 1504 aa65.1■■■■■ 8.01
NEK6-211ENST00000454453 ABCC9O60706 1549 aa59.2■■■■■ 7.07
NEK6-211ENST00000454453 CCDC180Q9P1Z9 1646 aa58.61■■■■■ 6.97
NEK6-211ENST00000454453 DNAJC5BQ9UF47 199 aa56.13■■■■■ 6.58
NEK6-211ENST00000454453 RB1CC1Q8TDY2 1594 aa56.04■■■■■ 6.56
NEK6-211ENST00000454453 NACADO15069 1562 aa55.53■■■■■ 6.48
NEK6-211ENST00000454453 DCAF8L2P0C7V8 631 aa55.09■■■■■ 6.41
NEK6-211ENST00000454453 PABPN1Q86U42 306 aaKnown RBP eCLIP55.04■■■■■ 6.4
NEK6-211ENST00000454453 UNC13AQ9UPW8 1703 aa54.88■■■■■ 6.38
NEK6-211ENST00000454453 MYO15BQ96JP2 1530 aa54.6■■■■■ 6.33
NEK6-211ENST00000454453 BICRAQ9NZM4 1560 aa54.57■■■■■ 6.33
NEK6-211ENST00000454453 ZCCHC6Q5VYS8 1495 aaKnown RBP53.86■■■■■ 6.21
NEK6-211ENST00000454453 DCAF1Q9Y4B6 1507 aa53.72■■■■■ 6.19
NEK6-211ENST00000454453 SHROOM4Q9ULL8 1493 aa53.62■■■■■ 6.17
NEK6-211ENST00000454453 CC2D2AQ9P2K1 1620 aa53.46■■■■■ 6.15
NEK6-211ENST00000454453 SCRIBQ14160 1630 aa53.42■■■■■ 6.14
NEK6-211ENST00000454453 CECR2Q9BXF3 1484 aa53.36■■■■■ 6.13
NEK6-211ENST00000454453 EIF4G1Q04637 1599 aaKnown RBP53.21■■■■■ 6.11
NEK6-211ENST00000454453 DNAJC5Q9H3Z4 198 aa51.83■■■■■ 5.89
NEK6-211ENST00000454453 NCAPD3P42695 1498 aa51.32■■■■■ 5.81
NEK6-211ENST00000454453 CUX2O14529 1486 aa51.19■■■■■ 5.79
NEK6-211ENST00000454453 ATAD2BQ9ULI0 1458 aa51.1■■■■■ 5.77
NEK6-211ENST00000454453 ERCC6Q03468 1493 aa51.06■■■■■ 5.76
NEK6-211ENST00000454453 SMARCA4P51532 1647 aa50.91■■■■■ 5.74
NEK6-211ENST00000454453 HMGXB3Q12766 1538 aa50.87■■■■■ 5.73
NEK6-211ENST00000454453 SMARCA2P51531 1590 aa50.85■■■■■ 5.73
NEK6-211ENST00000454453 NESP48681 1621 aa50.76■■■■■ 5.72
NEK6-211ENST00000454453 BAZ1BQ9UIG0 1483 aaKnown RBP50.52■■■■■ 5.68
NEK6-211ENST00000454453 BAZ1AQ9NRL2 1556 aaPredicted RBP50.52■■■■■ 5.68
NEK6-211ENST00000454453 PEG3Q9GZU2 1588 aa50.43■■■■■ 5.66
NEK6-211ENST00000454453 THOC2Q8NI27 1593 aaKnown RBP50.34■■■■■ 5.65
NEK6-211ENST00000454453 LAMC3Q9Y6N6 1575 aa50.21■■■■■ 5.63
NEK6-211ENST00000454453 MROH2BQ7Z745 1585 aa50.21■■■■■ 5.63
NEK6-211ENST00000454453 KIF21AQ7Z4S6 1674 aa50.04■■■■■ 5.6
NEK6-211ENST00000454453 PDS5BQ9NTI5 1447 aa49.9■■■■■ 5.58
NEK6-211ENST00000454453 CADPSQ9ULU8 1353 aa49.71■■■■■ 5.55
NEK6-211ENST00000454453 WIZO95785 1651 aa49.57■■■■■ 5.53
NEK6-211ENST00000454453 MRC2Q9UBG0 1479 aa49.56■■■■■ 5.52
NEK6-211ENST00000454453 WDR62O43379 1518 aa49.49■■■■■ 5.51
NEK6-211ENST00000454453 TRIM41Q8WV44 630 aa49.29■■■■■ 5.48
NEK6-211ENST00000454453 CEP164Q9UPV0 1460 aa49.23■■■■■ 5.47
NEK6-211ENST00000454453 FANCD2Q9BXW9 1451 aa49.16■■■■■ 5.46
NEK6-211ENST00000454453 CFTRP13569 1480 aa49.06■■■■■ 5.44
NEK6-211ENST00000454453 RSF1Q96T23 1441 aaPredicted RBP48.94■■■■■ 5.43
NEK6-211ENST00000454453 TOP2AP11388 1531 aaKnown RBP48.85■■■■■ 5.41
NEK6-211ENST00000454453 URB2Q14146 1524 aaKnown RBP48.84■■■■■ 5.41
NEK6-211ENST00000454453 OSCARQ8IYS5 282 aa48.73■■■■■ 5.39
NEK6-211ENST00000454453 PRDM2Q13029 1718 aa48.48■■■■■ 5.35
NEK6-211ENST00000454453 ZNF608Q9ULD9 1512 aaPredicted RBP48.34■■■■■ 5.33
NEK6-211ENST00000454453 CCDC88BA6NC98 1476 aa48.34■■■■■ 5.33
NEK6-211ENST00000454453 IFT140Q96RY7 1462 aa48.27■■■■■ 5.32
NEK6-211ENST00000454453 RIMBP3CA6NJZ7 1639 aa48.25■■■■■ 5.32
NEK6-211ENST00000454453 RIMBP3BA6NNM3 1639 aa48.25■■■■■ 5.32
NEK6-211ENST00000454453 RIMBP3Q9UFD9 1639 aa48.25■■■■■ 5.32
NEK6-211ENST00000454453 TOPBP1Q92547 1522 aa48.19■■■■■ 5.31
NEK6-211ENST00000454453 ARHGEF11O15085 1522 aa48.03■■■■■ 5.28
NEK6-211ENST00000454453 EIF4G3O43432 1585 aaKnown RBP48■■■■■ 5.28
NEK6-211ENST00000454453 ABCC8Q09428 1581 aa47.93■■■■■ 5.26
NEK6-211ENST00000454453 DNMBPQ6XZF7 1577 aa47.93■■■■■ 5.26
NEK6-211ENST00000454453 TARBP1Q13395 1621 aaKnown RBP47.83■■■■■ 5.25
NEK6-211ENST00000454453 AQRO60306 1485 aaKnown RBP eCLIP47.81■■■■■ 5.242e-7■□□□□ 10.1
NEK6-211ENST00000454453 CHD1O14646 1710 aa47.75■■■■■ 5.23
NEK6-211ENST00000454453 CYB5RLQ6IPT4 315 aa47.67■■■■■ 5.22
NEK6-211ENST00000454453 POLA1P09884 1462 aaPredicted RBP47.66■■■■■ 5.22
NEK6-211ENST00000454453 ARAP1Q96P48 1450 aa47.56■■■■■ 5.2
NEK6-211ENST00000454453 RAD54L2Q9Y4B4 1467 aa47.53■■■■■ 5.2
NEK6-211ENST00000454453 FBLN2P98095 1184 aa47.5■■■■■ 5.19
NEK6-211ENST00000454453 TDRD9Q8NDG6 1382 aaKnown RBP47.41■■■■■ 5.18
NEK6-211ENST00000454453 SOGA1O94964 1423 aa47.4■■■■■ 5.18
NEK6-211ENST00000454453 SNAPC4Q5SXM2 1469 aa47.28■■■■■ 5.16
NEK6-211ENST00000454453 FGD5Q6ZNL6 1462 aa47.28■■■■■ 5.16
NEK6-211ENST00000454453 TRHP20396 242 aaPredicted RBP47.26■■■■■ 5.16
NEK6-211ENST00000454453 CLASP1Q7Z460 1538 aa47.22■■■■■ 5.15
NEK6-211ENST00000454453 WDR97A6NE52 1622 aa47.2■■■■■ 5.15
NEK6-211ENST00000454453 CUX1P39880 1505 aa47.19■■■■■ 5.14
NEK6-211ENST00000454453 MAGI1Q96QZ7 1491 aaPredicted RBP47.08■■■■■ 5.13
NEK6-211ENST00000454453 CHMP7Q8WUX9 453 aaPredicted RBP47.05■■■■■ 5.12
NEK6-211ENST00000454453 SYNJ1O43426 1573 aa47.04■■■■■ 5.12
NEK6-211ENST00000454453 GRIN2BQ13224 1484 aa47.03■■■■■ 5.12
NEK6-211ENST00000454453 SYNJ2O15056 1496 aa46.95■■■■■ 5.11
NEK6-211ENST00000454453 PBRM1Q86U86 1689 aa46.84■■■■■ 5.09
NEK6-211ENST00000454453 GAPVD1Q14C86 1478 aa46.81■■■■■ 5.08
NEK6-211ENST00000454453 ABCA5Q8WWZ7 1642 aa46.71■■■■■ 5.07
NEK6-211ENST00000454453 ABCA10Q8WWZ4 1543 aa46.7■■■■■ 5.07
NEK6-211ENST00000454453 ERCC6L2Q5T890 1561 aa46.51■■■■■ 5.04
NEK6-211ENST00000454453 GRIN2AQ12879 1464 aa46.46■■■■■ 5.03
NEK6-211ENST00000454453 ADAMTS12P58397 1594 aa46.39■■■■■ 5.02
NEK6-211ENST00000454453 CEP170Q5SW79 1584 aa46.38■■■■■ 5.01
NEK6-211ENST00000454453 WRNQ14191 1432 aaPredicted RBP eCLIP46.36■■■■■ 5.01
NEK6-211ENST00000454453 NUP160Q12769 1436 aa46.35■■■■■ 5.01
NEK6-211ENST00000454453 SUPT5HO00267 1087 aaKnown RBP46.29■■■■■ 5
NEK6-211ENST00000454453 BIVM-ERCC5R4GMW8 1640 aa46.25■■■■■ 4.99
NEK6-211ENST00000454453 TOP2BQ02880 1626 aa46.24■■■■■ 4.99
NEK6-211ENST00000454453 SHROOM2Q13796 1616 aa46.22■■■■■ 4.99
NEK6-211ENST00000454453 AEBP2Q6ZN18 517 aaPredicted RBP46.22■■■■■ 4.99
NEK6-211ENST00000454453 FHAD1B1AJZ9 1412 aa46.18■■■■■ 4.98
NEK6-211ENST00000454453 ERICH3Q5RHP9 1530 aa46.08■■■■■ 4.97
NEK6-211ENST00000454453 PRG4Q92954 1404 aaPredicted RBP45.92■■■■■ 4.94
NEK6-211ENST00000454453 KIF13AQ9H1H9 1805 aa45.89■■■■■ 4.94
NEK6-211ENST00000454453 JPH4Q96JJ6 628 aa45.82■■■■■ 4.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms