RNA–Protein interactions for RNA: ENST00000519170.1

MCM4-207, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 3

Gene MCM4, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-207ENST00000519170 NISCHQ9Y2I1 1504 aa28.79■■■□□ 2.2
MCM4-207ENST00000519170 ABCC9O60706 1549 aa25.75■■□□□ 1.71
MCM4-207ENST00000519170 CCDC180Q9P1Z9 1646 aa25.73■■□□□ 1.71
MCM4-207ENST00000519170 RB1CC1Q8TDY2 1594 aa24.54■■□□□ 1.52
MCM4-207ENST00000519170 DCAF8L2P0C7V8 631 aa24.42■■□□□ 1.5
MCM4-207ENST00000519170 NACADO15069 1562 aa24.41■■□□□ 1.5
MCM4-207ENST00000519170 DNAJC5BQ9UF47 199 aa24.2■■□□□ 1.46
MCM4-207ENST00000519170 MYO15BQ96JP2 1530 aa24.11■■□□□ 1.45
MCM4-207ENST00000519170 PABPN1Q86U42 306 aaKnown RBP eCLIP24.07■■□□□ 1.44
MCM4-207ENST00000519170 UNC13AQ9UPW8 1703 aa23.85■■□□□ 1.41
MCM4-207ENST00000519170 ZCCHC6Q5VYS8 1495 aaKnown RBP23.83■■□□□ 1.41
MCM4-207ENST00000519170 DCAF1Q9Y4B6 1507 aa23.8■■□□□ 1.4
MCM4-207ENST00000519170 BICRAQ9NZM4 1560 aa23.77■■□□□ 1.4
MCM4-207ENST00000519170 SHROOM4Q9ULL8 1493 aa23.52■■□□□ 1.36
MCM4-207ENST00000519170 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
MCM4-207ENST00000519170 CC2D2AQ9P2K1 1620 aa23.23■■□□□ 1.31
MCM4-207ENST00000519170 CECR2Q9BXF3 1484 aa23.22■■□□□ 1.31
MCM4-207ENST00000519170 EIF4G1Q04637 1599 aaKnown RBP23.2■■□□□ 1.3
MCM4-207ENST00000519170 NCAPD3P42695 1498 aa22.57■■□□□ 1.2
MCM4-207ENST00000519170 ATAD2BQ9ULI0 1458 aa22.48■■□□□ 1.19
MCM4-207ENST00000519170 SMARCA2P51531 1590 aa22.41■■□□□ 1.18
MCM4-207ENST00000519170 SMARCA4P51532 1647 aa22.39■■□□□ 1.18
MCM4-207ENST00000519170 BAZ1AQ9NRL2 1556 aaPredicted RBP22.34■■□□□ 1.17
MCM4-207ENST00000519170 HMGXB3Q12766 1538 aa22.32■■□□□ 1.16
MCM4-207ENST00000519170 ERCC6Q03468 1493 aa22.26■■□□□ 1.15
MCM4-207ENST00000519170 BAZ1BQ9UIG0 1483 aaKnown RBP22.24■■□□□ 1.15
MCM4-207ENST00000519170 DNAJC5Q9H3Z4 198 aa22.24■■□□□ 1.15
MCM4-207ENST00000519170 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
MCM4-207ENST00000519170 CUX2O14529 1486 aa22.2■■□□□ 1.14
MCM4-207ENST00000519170 MROH2BQ7Z745 1585 aa22.16■■□□□ 1.14
MCM4-207ENST00000519170 NESP48681 1621 aa22.12■■□□□ 1.13
MCM4-207ENST00000519170 LAMC3Q9Y6N6 1575 aa21.99■■□□□ 1.11
MCM4-207ENST00000519170 PDS5BQ9NTI5 1447 aa21.95■■□□□ 1.1
MCM4-207ENST00000519170 CADPSQ9ULU8 1353 aa21.91■■□□□ 1.1
MCM4-207ENST00000519170 WIZO95785 1651 aa21.85■■□□□ 1.09
MCM4-207ENST00000519170 THOC2Q8NI27 1593 aaKnown RBP21.82■■□□□ 1.08
MCM4-207ENST00000519170 RSF1Q96T23 1441 aaPredicted RBP21.78■■□□□ 1.08
MCM4-207ENST00000519170 KIF21AQ7Z4S6 1674 aa21.75■■□□□ 1.07
MCM4-207ENST00000519170 MRC2Q9UBG0 1479 aa21.68■■□□□ 1.06
MCM4-207ENST00000519170 CFTRP13569 1480 aa21.63■■□□□ 1.05
MCM4-207ENST00000519170 TOP2AP11388 1531 aaKnown RBP21.61■■□□□ 1.05
MCM4-207ENST00000519170 FANCD2Q9BXW9 1451 aa21.6■■□□□ 1.05
MCM4-207ENST00000519170 CEP164Q9UPV0 1460 aa21.6■■□□□ 1.05
MCM4-207ENST00000519170 WDR62O43379 1518 aa21.59■■□□□ 1.05
MCM4-207ENST00000519170 CCDC88BA6NC98 1476 aa21.43■■□□□ 1.02
MCM4-207ENST00000519170 URB2Q14146 1524 aaKnown RBP21.39■■□□□ 1.01
MCM4-207ENST00000519170 OSCARQ8IYS5 282 aa21.33■■□□□ 1.01
MCM4-207ENST00000519170 PRDM2Q13029 1718 aa21.25■□□□□ 0.99
MCM4-207ENST00000519170 TRIM41Q8WV44 630 aa21.23■□□□□ 0.99
MCM4-207ENST00000519170 ABCC8Q09428 1581 aa21.21■□□□□ 0.99
MCM4-207ENST00000519170 IFT140Q96RY7 1462 aa21.2■□□□□ 0.98
MCM4-207ENST00000519170 TOPBP1Q92547 1522 aa21.18■□□□□ 0.98
MCM4-207ENST00000519170 ZNF608Q9ULD9 1512 aaPredicted RBP21.13■□□□□ 0.97
MCM4-207ENST00000519170 AEBP2Q6ZN18 517 aaPredicted RBP21.12■□□□□ 0.97
MCM4-207ENST00000519170 DNMBPQ6XZF7 1577 aa21.08■□□□□ 0.97
MCM4-207ENST00000519170 AQRO60306 1485 aaKnown RBP eCLIP20.98■□□□□ 0.954e-8■■■■■ 29.6
MCM4-207ENST00000519170 POLA1P09884 1462 aaPredicted RBP20.96■□□□□ 0.95
MCM4-207ENST00000519170 TARBP1Q13395 1621 aaKnown RBP20.95■□□□□ 0.94
MCM4-207ENST00000519170 SOGA1O94964 1423 aa20.95■□□□□ 0.94
MCM4-207ENST00000519170 EIF4G3O43432 1585 aaKnown RBP20.93■□□□□ 0.94
MCM4-207ENST00000519170 SUPT5HO00267 1087 aaKnown RBP20.92■□□□□ 0.94
MCM4-207ENST00000519170 FBLN2P98095 1184 aa20.9■□□□□ 0.94
MCM4-207ENST00000519170 RAD54L2Q9Y4B4 1467 aa20.89■□□□□ 0.94
MCM4-207ENST00000519170 TDRD9Q8NDG6 1382 aaKnown RBP20.88■□□□□ 0.93
MCM4-207ENST00000519170 RIMBP3CA6NJZ7 1639 aa20.85■□□□□ 0.93
MCM4-207ENST00000519170 RIMBP3BA6NNM3 1639 aa20.85■□□□□ 0.93
MCM4-207ENST00000519170 RIMBP3Q9UFD9 1639 aa20.85■□□□□ 0.93
MCM4-207ENST00000519170 FGD5Q6ZNL6 1462 aa20.83■□□□□ 0.93
MCM4-207ENST00000519170 ARHGEF11O15085 1522 aa20.82■□□□□ 0.92
MCM4-207ENST00000519170 CUX1P39880 1505 aa20.81■□□□□ 0.92
MCM4-207ENST00000519170 CYB5RLQ6IPT4 315 aa20.79■□□□□ 0.92
MCM4-207ENST00000519170 CHMP7Q8WUX9 453 aaPredicted RBP20.78■□□□□ 0.92
MCM4-207ENST00000519170 WDR97A6NE52 1622 aa20.76■□□□□ 0.91
MCM4-207ENST00000519170 CHD1O14646 1710 aa20.75■□□□□ 0.91
MCM4-207ENST00000519170 GRIN2BQ13224 1484 aa20.72■□□□□ 0.91
MCM4-207ENST00000519170 SNAPC4Q5SXM2 1469 aa20.72■□□□□ 0.91
MCM4-207ENST00000519170 MAGI1Q96QZ7 1491 aaPredicted RBP20.7■□□□□ 0.9
MCM4-207ENST00000519170 GAPVD1Q14C86 1478 aa20.66■□□□□ 0.9
MCM4-207ENST00000519170 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
MCM4-207ENST00000519170 SYNJ2O15056 1496 aa20.63■□□□□ 0.89
MCM4-207ENST00000519170 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
MCM4-207ENST00000519170 WRNQ14191 1432 aaPredicted RBP eCLIP20.61■□□□□ 0.89
MCM4-207ENST00000519170 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
MCM4-207ENST00000519170 CLASP1Q7Z460 1538 aa20.57■□□□□ 0.88
MCM4-207ENST00000519170 TRHP20396 242 aaPredicted RBP20.54■□□□□ 0.88
MCM4-207ENST00000519170 ABCA5Q8WWZ7 1642 aa20.51■□□□□ 0.87
MCM4-207ENST00000519170 PBRM1Q86U86 1689 aa20.5■□□□□ 0.87
MCM4-207ENST00000519170 TOP2BQ02880 1626 aa20.49■□□□□ 0.87
MCM4-207ENST00000519170 BIVM-ERCC5R4GMW8 1640 aa20.45■□□□□ 0.86
MCM4-207ENST00000519170 FHAD1B1AJZ9 1412 aa20.42■□□□□ 0.86
MCM4-207ENST00000519170 GRIN2AQ12879 1464 aa20.42■□□□□ 0.86
MCM4-207ENST00000519170 NUP160Q12769 1436 aa20.37■□□□□ 0.85
MCM4-207ENST00000519170 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
MCM4-207ENST00000519170 ADAMTS12P58397 1594 aa20.34■□□□□ 0.85
MCM4-207ENST00000519170 CEP170Q5SW79 1584 aa20.29■□□□□ 0.84
MCM4-207ENST00000519170 JPH4Q96JJ6 628 aa20.28■□□□□ 0.84
MCM4-207ENST00000519170 ERCC6L2Q5T890 1561 aa20.24■□□□□ 0.83
MCM4-207ENST00000519170 IGF1RP08069 1367 aa20.21■□□□□ 0.83
MCM4-207ENST00000519170 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
MCM4-207ENST00000519170 PRG4Q92954 1404 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms