RNA–Protein interactions for RNA: ENST00000373600.7

NEK6-203, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 3,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-203ENST00000373600 NISCHQ9Y2I1 1504 aa23.32■■□□□ 1.32
NEK6-203ENST00000373600 SHROOM4Q9ULL8 1493 aa20.96■□□□□ 0.95
NEK6-203ENST00000373600 DCAF8L2P0C7V8 631 aa20.82■□□□□ 0.92
NEK6-203ENST00000373600 SUPT5HO00267 1087 aaKnown RBP20.65■□□□□ 0.9
NEK6-203ENST00000373600 ZCCHC6Q5VYS8 1495 aaKnown RBP19.62■□□□□ 0.73
NEK6-203ENST00000373600 CHIC1Q5VXU3 224 aa19.58■□□□□ 0.73
NEK6-203ENST00000373600 ABCC9O60706 1549 aa19.51■□□□□ 0.71
NEK6-203ENST00000373600 EHMT2Q96KQ7 1210 aa19.45■□□□□ 0.7
NEK6-203ENST00000373600 PCGF6Q9BYE7 350 aa19.45■□□□□ 0.7
NEK6-203ENST00000373600 LOC105371045A0A1W2PR82 267 aa19.37■□□□□ 0.69
NEK6-203ENST00000373600 CCDC180Q9P1Z9 1646 aa19.35■□□□□ 0.69
NEK6-203ENST00000373600 MYO15BQ96JP2 1530 aa19.33■□□□□ 0.69
NEK6-203ENST00000373600 FAM9AQ8IZU1 332 aaPredicted RBP19.25■□□□□ 0.67
NEK6-203ENST00000373600 PPARGC1BQ86YN6 1023 aaKnown RBP19.07■□□□□ 0.64
NEK6-203ENST00000373600 HRCP23327 699 aa19.05■□□□□ 0.64
NEK6-203ENST00000373600 TRIM41Q8WV44 630 aa18.98■□□□□ 0.63
NEK6-203ENST00000373600 PABPN1Q86U42 306 aaKnown RBP eCLIP18.89■□□□□ 0.61
NEK6-203ENST00000373600 SCRIBQ14160 1630 aa18.87■□□□□ 0.61
NEK6-203ENST00000373600 TTBK1Q5TCY1 1321 aaPredicted RBP18.75■□□□□ 0.59
NEK6-203ENST00000373600 DCAF1Q9Y4B6 1507 aa18.69■□□□□ 0.58
NEK6-203ENST00000373600 TRIM26Q12899 539 aaPredicted RBP18.67■□□□□ 0.58
NEK6-203ENST00000373600 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
NEK6-203ENST00000373600 CECR2Q9BXF3 1484 aa18.5■□□□□ 0.55
NEK6-203ENST00000373600 RB1CC1Q8TDY2 1594 aa18.45■□□□□ 0.54
NEK6-203ENST00000373600 RANGAP1P46060 587 aaPredicted RBP18.34■□□□□ 0.53
NEK6-203ENST00000373600 NACADO15069 1562 aa18.3■□□□□ 0.52
NEK6-203ENST00000373600 MROH2BQ7Z745 1585 aa18.3■□□□□ 0.52
NEK6-203ENST00000373600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.3■□□□□ 0.52
NEK6-203ENST00000373600 UBTFP17480 764 aaKnown RBP18.26■□□□□ 0.51
NEK6-203ENST00000373600 CCER1Q8TC90 406 aaPredicted RBP18.25■□□□□ 0.51
NEK6-203ENST00000373600 ZEB1P37275 1124 aaPredicted RBP18.18■□□□□ 0.5
NEK6-203ENST00000373600 WIZO95785 1651 aa18.17■□□□□ 0.5
NEK6-203ENST00000373600 ABCC8Q09428 1581 aa17.99■□□□□ 0.47
NEK6-203ENST00000373600 HNRNPUL2Q1KMD3 747 aaKnown RBP17.95■□□□□ 0.46
NEK6-203ENST00000373600 CCDC88BA6NC98 1476 aa17.93■□□□□ 0.46
NEK6-203ENST00000373600 CSRNP3Q8WYN3 585 aa17.92■□□□□ 0.46
NEK6-203ENST00000373600 SOGA1O94964 1423 aa17.91■□□□□ 0.46
NEK6-203ENST00000373600 BAZ1AQ9NRL2 1556 aaPredicted RBP17.89■□□□□ 0.45
NEK6-203ENST00000373600 APLP2Q06481 763 aa17.86■□□□□ 0.45
NEK6-203ENST00000373600 RUSC2Q8N2Y8 1516 aa17.8■□□□□ 0.44
NEK6-203ENST00000373600 CEP162Q5TB80 1403 aa17.78■□□□□ 0.44
NEK6-203ENST00000373600 YTHDC1Q96MU7 727 aaKnown RBP17.78■□□□□ 0.44
NEK6-203ENST00000373600 DIEXFQ68CQ4 756 aaKnown RBP17.74■□□□□ 0.43
NEK6-203ENST00000373600 SMARCA4P51532 1647 aa17.7■□□□□ 0.42
NEK6-203ENST00000373600 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
NEK6-203ENST00000373600 TOP2AP11388 1531 aaKnown RBP17.69■□□□□ 0.42
NEK6-203ENST00000373600 ITGAEP38570 1179 aa17.65■□□□□ 0.42
NEK6-203ENST00000373600 WRNQ14191 1432 aaPredicted RBP eCLIP17.64■□□□□ 0.41
NEK6-203ENST00000373600 SMARCA2P51531 1590 aa17.64■□□□□ 0.41
NEK6-203ENST00000373600 TNIKQ9UKE5 1360 aa17.6■□□□□ 0.41
NEK6-203ENST00000373600 NEUROD1Q13562 356 aa17.58■□□□□ 0.4
NEK6-203ENST00000373600 ATP1B4Q9UN42 357 aaPredicted RBP17.58■□□□□ 0.4
NEK6-203ENST00000373600 BICRAQ9NZM4 1560 aa17.57■□□□□ 0.4
NEK6-203ENST00000373600 UNC13AQ9UPW8 1703 aa17.57■□□□□ 0.4
NEK6-203ENST00000373600 CENPBP07199 599 aaPredicted RBP17.52■□□□□ 0.39
NEK6-203ENST00000373600 GOLGA3Q08378 1498 aa17.52■□□□□ 0.39
NEK6-203ENST00000373600 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.39
NEK6-203ENST00000373600 CLIP1P30622 1438 aa17.51■□□□□ 0.39
NEK6-203ENST00000373600 GTF3C3Q9Y5Q9 886 aa17.49■□□□□ 0.39
NEK6-203ENST00000373600 ACIN1Q9UKV3 1341 aaKnown RBP17.47■□□□□ 0.39
NEK6-203ENST00000373600 ZNF316A6NFI3 1004 aaPredicted RBP17.47■□□□□ 0.39
NEK6-203ENST00000373600 EIF4G1Q04637 1599 aaKnown RBP17.44■□□□□ 0.38
NEK6-203ENST00000373600 EEA1Q15075 1411 aa17.43■□□□□ 0.38
NEK6-203ENST00000373600 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
NEK6-203ENST00000373600 ATAD2BQ9ULI0 1458 aa17.41■□□□□ 0.38
NEK6-203ENST00000373600 P3H3Q8IVL6 736 aa17.4■□□□□ 0.38
NEK6-203ENST00000373600 RAPGEF2Q9Y4G8 1499 aa17.38■□□□□ 0.37
NEK6-203ENST00000373600 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
NEK6-203ENST00000373600 MIER1Q8N108 512 aa17.36■□□□□ 0.37
NEK6-203ENST00000373600 SYNJ1O43426 1573 aa17.35■□□□□ 0.37
NEK6-203ENST00000373600 KANK4Q5T7N3 995 aaPredicted RBP17.33■□□□□ 0.36
NEK6-203ENST00000373600 VPS8Q8N3P4 1428 aa17.25■□□□□ 0.35
NEK6-203ENST00000373600 FAM50AQ14320 339 aaKnown RBP17.24■□□□□ 0.35
NEK6-203ENST00000373600 PELP1Q8IZL8 1130 aaKnown RBP17.1■□□□□ 0.33
NEK6-203ENST00000373600 KIF27Q86VH2 1401 aa17.1■□□□□ 0.33
NEK6-203ENST00000373600 KIF21BO75037 1637 aa17.09■□□□□ 0.33
NEK6-203ENST00000373600 HIRIP3Q9BW71 556 aaPredicted RBP17.09■□□□□ 0.33
NEK6-203ENST00000373600 CC2D2AQ9P2K1 1620 aa17.07■□□□□ 0.32
NEK6-203ENST00000373600 ARID3CA6NKF2 412 aa17.06■□□□□ 0.32
NEK6-203ENST00000373600 NCAPD3P42695 1498 aa17.05■□□□□ 0.32
NEK6-203ENST00000373600 CUX2O14529 1486 aa17.04■□□□□ 0.32
NEK6-203ENST00000373600 FBLN2P98095 1184 aa17.03■□□□□ 0.32
NEK6-203ENST00000373600 PEG3Q9GZU2 1588 aa17.02■□□□□ 0.31
NEK6-203ENST00000373600 ARAP1Q96P48 1450 aa17■□□□□ 0.31
NEK6-203ENST00000373600 SIN3AQ96ST3 1273 aa17■□□□□ 0.31
NEK6-203ENST00000373600 NESP48681 1621 aa17■□□□□ 0.31
NEK6-203ENST00000373600 CADPSQ9ULU8 1353 aa16.98■□□□□ 0.31
NEK6-203ENST00000373600 CUX1P39880 1505 aa16.97■□□□□ 0.31
NEK6-203ENST00000373600 DHX57Q6P158 1386 aaKnown RBP16.97■□□□□ 0.31
NEK6-203ENST00000373600 TOP2BQ02880 1626 aa16.96■□□□□ 0.31
NEK6-203ENST00000373600 CCNB3Q8WWL7 1395 aa16.95■□□□□ 0.3
NEK6-203ENST00000373600 CARMIL1Q5VZK9 1371 aa16.95■□□□□ 0.3
NEK6-203ENST00000373600 DDX10Q13206 875 aaKnown RBP16.93■□□□□ 0.3
NEK6-203ENST00000373600 PRXQ9BXM0 1461 aa16.93■□□□□ 0.3
NEK6-203ENST00000373600 BCANQ96GW7 911 aa16.92■□□□□ 0.3
NEK6-203ENST00000373600 KCNH8Q96L42 1107 aa16.9■□□□□ 0.3
NEK6-203ENST00000373600 IGF1RP08069 1367 aa16.89■□□□□ 0.3
NEK6-203ENST00000373600 RAB3GAP2Q9H2M9 1393 aa16.86■□□□□ 0.29
NEK6-203ENST00000373600 ARHGAP35Q9NRY4 1499 aa16.86■□□□□ 0.29
NEK6-203ENST00000373600 CNGB1Q14028 1251 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms