RNA–Protein interactions for RNA: ENST00000545174.5

NEK6-214, Transcript of NIMA related kinase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK6, Length 2,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-214ENST00000545174 NISCHQ9Y2I1 1504 aa46.52■■■■■ 5.04
NEK6-214ENST00000545174 SHROOM4Q9ULL8 1493 aa39.65■■■■□ 3.94
NEK6-214ENST00000545174 CCDC180Q9P1Z9 1646 aa39.53■■■■□ 3.92
NEK6-214ENST00000545174 ZCCHC6Q5VYS8 1495 aaKnown RBP39.27■■■■□ 3.88
NEK6-214ENST00000545174 DCAF8L2P0C7V8 631 aa38.88■■■■□ 3.82
NEK6-214ENST00000545174 SUPT5HO00267 1087 aaKnown RBP38.74■■■■□ 3.79
NEK6-214ENST00000545174 DCAF1Q9Y4B6 1507 aa38.06■■■■□ 3.68
NEK6-214ENST00000545174 CHIC1Q5VXU3 224 aa37.47■■■■□ 3.59
NEK6-214ENST00000545174 MYO15BQ96JP2 1530 aa37.25■■■■□ 3.55
NEK6-214ENST00000545174 SCRIBQ14160 1630 aa37.19■■■■□ 3.54
NEK6-214ENST00000545174 ABCC9O60706 1549 aa37.13■■■■□ 3.53
NEK6-214ENST00000545174 RSF1Q96T23 1441 aaPredicted RBP36.77■■■■□ 3.48
NEK6-214ENST00000545174 NACADO15069 1562 aa36.68■■■■□ 3.46
NEK6-214ENST00000545174 LOC105371045A0A1W2PR82 267 aa36.45■■■■□ 3.43
NEK6-214ENST00000545174 CECR2Q9BXF3 1484 aa36.43■■■■□ 3.42
NEK6-214ENST00000545174 RB1CC1Q8TDY2 1594 aa36.31■■■■□ 3.4
NEK6-214ENST00000545174 MROH2BQ7Z745 1585 aa36.22■■■■□ 3.39
NEK6-214ENST00000545174 PCGF6Q9BYE7 350 aa36.03■■■■□ 3.36
NEK6-214ENST00000545174 TRIM41Q8WV44 630 aa36.03■■■■□ 3.36
NEK6-214ENST00000545174 WIZO95785 1651 aa35.99■■■■□ 3.35
NEK6-214ENST00000545174 FAM9AQ8IZU1 332 aaPredicted RBP35.84■■■■□ 3.33
NEK6-214ENST00000545174 HRCP23327 699 aa35.73■■■■□ 3.31
NEK6-214ENST00000545174 BAZ1AQ9NRL2 1556 aaPredicted RBP35.7■■■■□ 3.31
NEK6-214ENST00000545174 UNC13AQ9UPW8 1703 aa35.66■■■■□ 3.3
NEK6-214ENST00000545174 EHMT2Q96KQ7 1210 aa35.62■■■■□ 3.29
NEK6-214ENST00000545174 PABPN1Q86U42 306 aaKnown RBP eCLIP35.56■■■■□ 3.28
NEK6-214ENST00000545174 SMARCA4P51532 1647 aa35.46■■■■□ 3.27
NEK6-214ENST00000545174 TOP2AP11388 1531 aaKnown RBP35.33■■■■□ 3.25
NEK6-214ENST00000545174 TRIM26Q12899 539 aaPredicted RBP35.3■■■■□ 3.24
NEK6-214ENST00000545174 EIF4G1Q04637 1599 aaKnown RBP35.3■■■■□ 3.24
NEK6-214ENST00000545174 BICRAQ9NZM4 1560 aa35.29■■■■□ 3.24
NEK6-214ENST00000545174 CCDC88BA6NC98 1476 aa35.28■■■■□ 3.24
NEK6-214ENST00000545174 PPARGC1BQ86YN6 1023 aaKnown RBP35.22■■■■□ 3.23
NEK6-214ENST00000545174 SMARCA2P51531 1590 aa35.18■■■■□ 3.22
NEK6-214ENST00000545174 ABCC8Q09428 1581 aa35.12■■■■□ 3.21
NEK6-214ENST00000545174 SOGA1O94964 1423 aa34.77■■■■□ 3.16
NEK6-214ENST00000545174 PEG3Q9GZU2 1588 aa34.74■■■■□ 3.15
NEK6-214ENST00000545174 ATAD2BQ9ULI0 1458 aa34.69■■■■□ 3.14
NEK6-214ENST00000545174 RUSC2Q8N2Y8 1516 aa34.65■■■■□ 3.14
NEK6-214ENST00000545174 BAZ1BQ9UIG0 1483 aaKnown RBP34.54■■■■□ 3.12
NEK6-214ENST00000545174 WRNQ14191 1432 aaPredicted RBP eCLIP34.51■■■■□ 3.12
NEK6-214ENST00000545174 CSRNP3Q8WYN3 585 aa34.51■■■■□ 3.12
NEK6-214ENST00000545174 CEP162Q5TB80 1403 aa34.39■■■■□ 3.1
NEK6-214ENST00000545174 UBTFP17480 764 aaKnown RBP34.38■■■■□ 3.09
NEK6-214ENST00000545174 SYNJ1O43426 1573 aa34.36■■■■□ 3.09
NEK6-214ENST00000545174 TTBK1Q5TCY1 1321 aaPredicted RBP34.36■■■■□ 3.09
NEK6-214ENST00000545174 EEA1Q15075 1411 aa34.33■■■■□ 3.09
NEK6-214ENST00000545174 TNIKQ9UKE5 1360 aa34.32■■■■□ 3.09
NEK6-214ENST00000545174 ZEB1P37275 1124 aaPredicted RBP34.26■■■■□ 3.08
NEK6-214ENST00000545174 GOLGA3Q08378 1498 aa34.15■■■■□ 3.06
NEK6-214ENST00000545174 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.1■■■■□ 3.05
NEK6-214ENST00000545174 NCAPD3P42695 1498 aa34.03■■■■□ 3.04
NEK6-214ENST00000545174 CEP164Q9UPV0 1460 aa33.98■■■■□ 3.03
NEK6-214ENST00000545174 HMGXB3Q12766 1538 aa33.92■■■■□ 3.02
NEK6-214ENST00000545174 RANGAP1P46060 587 aaPredicted RBP33.9■■■■□ 3.02
NEK6-214ENST00000545174 RAPGEF2Q9Y4G8 1499 aa33.9■■■■□ 3.02
NEK6-214ENST00000545174 CCER1Q8TC90 406 aaPredicted RBP33.89■■■■□ 3.02
NEK6-214ENST00000545174 KIF21BO75037 1637 aa33.89■■■■□ 3.02
NEK6-214ENST00000545174 TOP2BQ02880 1626 aa33.89■■■■□ 3.02
NEK6-214ENST00000545174 CLIP1P30622 1438 aa33.81■■■■□ 3
NEK6-214ENST00000545174 BIVM-ERCC5R4GMW8 1640 aa33.74■■■□□ 2.99
NEK6-214ENST00000545174 CUX1P39880 1505 aa33.71■■■□□ 2.99
NEK6-214ENST00000545174 CFTRP13569 1480 aa33.69■■■□□ 2.98
NEK6-214ENST00000545174 VPS8Q8N3P4 1428 aa33.59■■■□□ 2.97
NEK6-214ENST00000545174 PRXQ9BXM0 1461 aa33.54■■■□□ 2.96
NEK6-214ENST00000545174 HNRNPUL2Q1KMD3 747 aaKnown RBP33.49■■■□□ 2.95
NEK6-214ENST00000545174 APLP2Q06481 763 aa33.45■■■□□ 2.94
NEK6-214ENST00000545174 KIF27Q86VH2 1401 aa33.44■■■□□ 2.94
NEK6-214ENST00000545174 ERICH3Q5RHP9 1530 aa33.4■■■□□ 2.94
NEK6-214ENST00000545174 CADPSQ9ULU8 1353 aa33.4■■■□□ 2.94
NEK6-214ENST00000545174 CC2D2AQ9P2K1 1620 aa33.35■■■□□ 2.93
NEK6-214ENST00000545174 ARAP1Q96P48 1450 aa33.31■■■□□ 2.92
NEK6-214ENST00000545174 CUX2O14529 1486 aa33.24■■■□□ 2.91
NEK6-214ENST00000545174 KANK4Q5T7N3 995 aaPredicted RBP33.22■■■□□ 2.91
NEK6-214ENST00000545174 PRDM2Q13029 1718 aa33.22■■■□□ 2.91
NEK6-214ENST00000545174 IGF1RP08069 1367 aa33.2■■■□□ 2.91
NEK6-214ENST00000545174 FGD5Q6ZNL6 1462 aa33.16■■■□□ 2.9
NEK6-214ENST00000545174 ARHGAP35Q9NRY4 1499 aa33.09■■■□□ 2.89
NEK6-214ENST00000545174 FANCD2Q9BXW9 1451 aa33.07■■■□□ 2.88
NEK6-214ENST00000545174 DIEXFQ68CQ4 756 aaKnown RBP33.04■■■□□ 2.88
NEK6-214ENST00000545174 NESP48681 1621 aa33.03■■■□□ 2.88
NEK6-214ENST00000545174 CARMIL1Q5VZK9 1371 aa33.03■■■□□ 2.88
NEK6-214ENST00000545174 RAD54L2Q9Y4B4 1467 aa32.94■■■□□ 2.86
NEK6-214ENST00000545174 DNAJC5BQ9UF47 199 aa32.9■■■□□ 2.86
NEK6-214ENST00000545174 ZNF316A6NFI3 1004 aaPredicted RBP32.86■■■□□ 2.85
NEK6-214ENST00000545174 P3H3Q8IVL6 736 aa32.83■■■□□ 2.85
NEK6-214ENST00000545174 TOPBP1Q92547 1522 aa32.81■■■□□ 2.84
NEK6-214ENST00000545174 POLA1P09884 1462 aaPredicted RBP32.81■■■□□ 2.84
NEK6-214ENST00000545174 DNMBPQ6XZF7 1577 aa32.78■■■□□ 2.84
NEK6-214ENST00000545174 SCAF1Q9H7N4 1312 aaKnown RBP32.77■■■□□ 2.84
NEK6-214ENST00000545174 RRBP1Q9P2E9 1410 aaKnown RBP32.75■■■□□ 2.83
NEK6-214ENST00000545174 ITGAEP38570 1179 aa32.75■■■□□ 2.83
NEK6-214ENST00000545174 ABCA10Q8WWZ4 1543 aa32.7■■■□□ 2.83
NEK6-214ENST00000545174 DHX57Q6P158 1386 aaKnown RBP32.7■■■□□ 2.82
NEK6-214ENST00000545174 CCNB3Q8WWL7 1395 aa32.68■■■□□ 2.82
NEK6-214ENST00000545174 ATP1B4Q9UN42 357 aaPredicted RBP32.65■■■□□ 2.82
NEK6-214ENST00000545174 URB2Q14146 1524 aaKnown RBP32.63■■■□□ 2.81
NEK6-214ENST00000545174 NEUROD1Q13562 356 aa32.6■■■□□ 2.81
NEK6-214ENST00000545174 TIAM1Q13009 1591 aa32.59■■■□□ 2.81
NEK6-214ENST00000545174 TDRD9Q8NDG6 1382 aaKnown RBP32.57■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms