RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 NISCHQ9Y2I1 1504 aa25.53■■□□□ 1.68
NEK6-213ENST00000540326 SHROOM4Q9ULL8 1493 aa21.97■■□□□ 1.11
NEK6-213ENST00000540326 ZCCHC6Q5VYS8 1495 aaKnown RBP21.6■■□□□ 1.05
NEK6-213ENST00000540326 CCDC180Q9P1Z9 1646 aa21.6■■□□□ 1.05
NEK6-213ENST00000540326 SUPT5HO00267 1087 aaKnown RBP21.59■■□□□ 1.05
NEK6-213ENST00000540326 DCAF8L2P0C7V8 631 aa21.32■■□□□ 1
NEK6-213ENST00000540326 CHIC1Q5VXU3 224 aa20.97■□□□□ 0.95
NEK6-213ENST00000540326 MYO15BQ96JP2 1530 aa20.92■□□□□ 0.94
NEK6-213ENST00000540326 DCAF1Q9Y4B6 1507 aa20.87■□□□□ 0.93
NEK6-213ENST00000540326 PCGF6Q9BYE7 350 aa20.47■□□□□ 0.87
NEK6-213ENST00000540326 HRCP23327 699 aa20.46■□□□□ 0.87
NEK6-213ENST00000540326 LOC105371045A0A1W2PR82 267 aa20.42■□□□□ 0.86
NEK6-213ENST00000540326 ABCC9O60706 1549 aa20.4■□□□□ 0.86
NEK6-213ENST00000540326 SCRIBQ14160 1630 aa20.37■□□□□ 0.85
NEK6-213ENST00000540326 RSF1Q96T23 1441 aaPredicted RBP20.26■□□□□ 0.83
NEK6-213ENST00000540326 PPARGC1BQ86YN6 1023 aaKnown RBP20.11■□□□□ 0.81
NEK6-213ENST00000540326 RB1CC1Q8TDY2 1594 aa20.08■□□□□ 0.81
NEK6-213ENST00000540326 TRIM41Q8WV44 630 aa20.06■□□□□ 0.8
NEK6-213ENST00000540326 TRIM26Q12899 539 aaPredicted RBP19.99■□□□□ 0.79
NEK6-213ENST00000540326 NACADO15069 1562 aa19.97■□□□□ 0.79
NEK6-213ENST00000540326 FAM9AQ8IZU1 332 aaPredicted RBP19.97■□□□□ 0.79
NEK6-213ENST00000540326 CECR2Q9BXF3 1484 aa19.97■□□□□ 0.79
NEK6-213ENST00000540326 MROH2BQ7Z745 1585 aa19.89■□□□□ 0.77
NEK6-213ENST00000540326 EHMT2Q96KQ7 1210 aa19.86■□□□□ 0.77
NEK6-213ENST00000540326 WIZO95785 1651 aa19.79■□□□□ 0.76
NEK6-213ENST00000540326 BAZ1AQ9NRL2 1556 aaPredicted RBP19.62■□□□□ 0.73
NEK6-213ENST00000540326 ZEB1P37275 1124 aaPredicted RBP19.54■□□□□ 0.72
NEK6-213ENST00000540326 EIF4G1Q04637 1599 aaKnown RBP19.5■□□□□ 0.71
NEK6-213ENST00000540326 TOP2AP11388 1531 aaKnown RBP19.43■□□□□ 0.7
NEK6-213ENST00000540326 SMARCA4P51532 1647 aa19.42■□□□□ 0.7
NEK6-213ENST00000540326 ABCC8Q09428 1581 aa19.42■□□□□ 0.7
NEK6-213ENST00000540326 CCDC88BA6NC98 1476 aa19.4■□□□□ 0.7
NEK6-213ENST00000540326 UNC13AQ9UPW8 1703 aa19.39■□□□□ 0.69
NEK6-213ENST00000540326 SMARCA2P51531 1590 aa19.35■□□□□ 0.69
NEK6-213ENST00000540326 PABPN1Q86U42 306 aaKnown RBP eCLIP19.27■□□□□ 0.67
NEK6-213ENST00000540326 SOGA1O94964 1423 aa19.25■□□□□ 0.67
NEK6-213ENST00000540326 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.25■□□□□ 0.67
NEK6-213ENST00000540326 TTBK1Q5TCY1 1321 aaPredicted RBP19.23■□□□□ 0.67
NEK6-213ENST00000540326 CEP162Q5TB80 1403 aa19.18■□□□□ 0.66
NEK6-213ENST00000540326 CCER1Q8TC90 406 aaPredicted RBP19.18■□□□□ 0.66
NEK6-213ENST00000540326 RUSC2Q8N2Y8 1516 aa19.16■□□□□ 0.66
NEK6-213ENST00000540326 BICRAQ9NZM4 1560 aa19.14■□□□□ 0.65
NEK6-213ENST00000540326 CSRNP3Q8WYN3 585 aa19.13■□□□□ 0.65
NEK6-213ENST00000540326 WRNQ14191 1432 aaPredicted RBP eCLIP19.12■□□□□ 0.65
NEK6-213ENST00000540326 UBTFP17480 764 aaKnown RBP19.12■□□□□ 0.65
NEK6-213ENST00000540326 TNIKQ9UKE5 1360 aa19.11■□□□□ 0.65
NEK6-213ENST00000540326 EEA1Q15075 1411 aa19.07■□□□□ 0.64
NEK6-213ENST00000540326 PEG3Q9GZU2 1588 aa19■□□□□ 0.63
NEK6-213ENST00000540326 GOLGA3Q08378 1498 aa18.99■□□□□ 0.63
NEK6-213ENST00000540326 SYNJ1O43426 1573 aa18.94■□□□□ 0.62
NEK6-213ENST00000540326 SCAF1Q9H7N4 1312 aaKnown RBP18.93■□□□□ 0.62
NEK6-213ENST00000540326 ATAD2BQ9ULI0 1458 aa18.92■□□□□ 0.62
NEK6-213ENST00000540326 BAZ1BQ9UIG0 1483 aaKnown RBP18.88■□□□□ 0.61
NEK6-213ENST00000540326 CEP164Q9UPV0 1460 aa18.87■□□□□ 0.61
NEK6-213ENST00000540326 DIEXFQ68CQ4 756 aaKnown RBP18.83■□□□□ 0.6
NEK6-213ENST00000540326 KIF21BO75037 1637 aa18.82■□□□□ 0.6
NEK6-213ENST00000540326 CLIP1P30622 1438 aa18.8■□□□□ 0.6
NEK6-213ENST00000540326 RANGAP1P46060 587 aaPredicted RBP18.79■□□□□ 0.6
NEK6-213ENST00000540326 HNRNPUL2Q1KMD3 747 aaKnown RBP18.76■□□□□ 0.59
NEK6-213ENST00000540326 RAPGEF2Q9Y4G8 1499 aa18.76■□□□□ 0.59
NEK6-213ENST00000540326 NEUROD1Q13562 356 aa18.71■□□□□ 0.59
NEK6-213ENST00000540326 VPS8Q8N3P4 1428 aa18.71■□□□□ 0.59
NEK6-213ENST00000540326 ACIN1Q9UKV3 1341 aaKnown RBP18.71■□□□□ 0.59
NEK6-213ENST00000540326 APLP2Q06481 763 aa18.68■□□□□ 0.58
NEK6-213ENST00000540326 PELP1Q8IZL8 1130 aaKnown RBP18.68■□□□□ 0.58
NEK6-213ENST00000540326 TOP2BQ02880 1626 aa18.67■□□□□ 0.58
NEK6-213ENST00000540326 ZNF316A6NFI3 1004 aaPredicted RBP18.64■□□□□ 0.57
NEK6-213ENST00000540326 BIVM-ERCC5R4GMW8 1640 aa18.58■□□□□ 0.56
NEK6-213ENST00000540326 CENPBP07199 599 aaPredicted RBP18.58■□□□□ 0.56
NEK6-213ENST00000540326 GTF3C3Q9Y5Q9 886 aa18.53■□□□□ 0.56
NEK6-213ENST00000540326 PRXQ9BXM0 1461 aa18.52■□□□□ 0.56
NEK6-213ENST00000540326 NCAPD3P42695 1498 aa18.51■□□□□ 0.55
NEK6-213ENST00000540326 CUX1P39880 1505 aa18.5■□□□□ 0.55
NEK6-213ENST00000540326 ERICH3Q5RHP9 1530 aa18.5■□□□□ 0.55
NEK6-213ENST00000540326 HMGXB3Q12766 1538 aa18.49■□□□□ 0.55
NEK6-213ENST00000540326 ARAP1Q96P48 1450 aa18.47■□□□□ 0.55
NEK6-213ENST00000540326 KANK4Q5T7N3 995 aaPredicted RBP18.45■□□□□ 0.54
NEK6-213ENST00000540326 YTHDC1Q96MU7 727 aaKnown RBP18.45■□□□□ 0.54
NEK6-213ENST00000540326 KIF27Q86VH2 1401 aa18.43■□□□□ 0.54
NEK6-213ENST00000540326 MIER1Q8N108 512 aa18.43■□□□□ 0.54
NEK6-213ENST00000540326 CFTRP13569 1480 aa18.4■□□□□ 0.54
NEK6-213ENST00000540326 DHX57Q6P158 1386 aaKnown RBP18.34■□□□□ 0.53
NEK6-213ENST00000540326 ARHGAP35Q9NRY4 1499 aa18.31■□□□□ 0.52
NEK6-213ENST00000540326 CLSPNQ9HAW4 1339 aa18.28■□□□□ 0.52
NEK6-213ENST00000540326 RRBP1Q9P2E9 1410 aaKnown RBP18.27■□□□□ 0.52
NEK6-213ENST00000540326 MYT1Q01538 1121 aa18.27■□□□□ 0.51
NEK6-213ENST00000540326 CUX2O14529 1486 aa18.26■□□□□ 0.51
NEK6-213ENST00000540326 ITGAEP38570 1179 aa18.26■□□□□ 0.51
NEK6-213ENST00000540326 IGF1RP08069 1367 aa18.24■□□□□ 0.51
NEK6-213ENST00000540326 CCNB3Q8WWL7 1395 aa18.23■□□□□ 0.51
NEK6-213ENST00000540326 PRDM2Q13029 1718 aa18.2■□□□□ 0.5
NEK6-213ENST00000540326 CADPSQ9ULU8 1353 aa18.2■□□□□ 0.5
NEK6-213ENST00000540326 CARMIL1Q5VZK9 1371 aa18.17■□□□□ 0.5
NEK6-213ENST00000540326 FGD5Q6ZNL6 1462 aa18.16■□□□□ 0.5
NEK6-213ENST00000540326 TIAM1Q13009 1591 aa18.11■□□□□ 0.49
NEK6-213ENST00000540326 P3H3Q8IVL6 736 aa18.1■□□□□ 0.49
NEK6-213ENST00000540326 RAB3GAP2Q9H2M9 1393 aa18.09■□□□□ 0.49
NEK6-213ENST00000540326 ATP1B4Q9UN42 357 aaPredicted RBP18.06■□□□□ 0.48
NEK6-213ENST00000540326 LRRC9Q6ZRR7 1453 aa18.05■□□□□ 0.48
NEK6-213ENST00000540326 PHLDB1Q86UU1 1377 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms