RNA–Protein interactions for RNA: ENST00000320246.9

NEK6-201, Transcript of NIMA related kinase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK6, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-201ENST00000320246 NISCHQ9Y2I1 1504 aa23.06■■□□□ 1.28
NEK6-201ENST00000320246 SHROOM4Q9ULL8 1493 aa20.44■□□□□ 0.86
NEK6-201ENST00000320246 DCAF8L2P0C7V8 631 aa20.28■□□□□ 0.84
NEK6-201ENST00000320246 SUPT5HO00267 1087 aaKnown RBP20.13■□□□□ 0.81
NEK6-201ENST00000320246 CCDC180Q9P1Z9 1646 aa19.62■□□□□ 0.73
NEK6-201ENST00000320246 ZCCHC6Q5VYS8 1495 aaKnown RBP19.47■□□□□ 0.71
NEK6-201ENST00000320246 EHMT2Q96KQ7 1210 aa19.33■□□□□ 0.68
NEK6-201ENST00000320246 PCGF6Q9BYE7 350 aa19■□□□□ 0.63
NEK6-201ENST00000320246 FAM9AQ8IZU1 332 aaPredicted RBP18.88■□□□□ 0.61
NEK6-201ENST00000320246 LOC105371045A0A1W2PR82 267 aa18.86■□□□□ 0.61
NEK6-201ENST00000320246 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
NEK6-201ENST00000320246 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
NEK6-201ENST00000320246 PPARGC1BQ86YN6 1023 aaKnown RBP18.77■□□□□ 0.6
NEK6-201ENST00000320246 HRCP23327 699 aa18.63■□□□□ 0.57
NEK6-201ENST00000320246 MYO15BQ96JP2 1530 aa18.62■□□□□ 0.57
NEK6-201ENST00000320246 TTBK1Q5TCY1 1321 aaPredicted RBP18.59■□□□□ 0.57
NEK6-201ENST00000320246 SCRIBQ14160 1630 aa18.49■□□□□ 0.55
NEK6-201ENST00000320246 ABCC9O60706 1549 aa18.47■□□□□ 0.55
NEK6-201ENST00000320246 TRIM41Q8WV44 630 aa18.29■□□□□ 0.52
NEK6-201ENST00000320246 RSF1Q96T23 1441 aaPredicted RBP18.21■□□□□ 0.51
NEK6-201ENST00000320246 NACADO15069 1562 aa18.2■□□□□ 0.5
NEK6-201ENST00000320246 RANGAP1P46060 587 aaPredicted RBP18.11■□□□□ 0.49
NEK6-201ENST00000320246 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
NEK6-201ENST00000320246 TRIM26Q12899 539 aaPredicted RBP18.07■□□□□ 0.48
NEK6-201ENST00000320246 RB1CC1Q8TDY2 1594 aa18.03■□□□□ 0.48
NEK6-201ENST00000320246 MROH2BQ7Z745 1585 aa17.96■□□□□ 0.47
NEK6-201ENST00000320246 PABPN1Q86U42 306 aaKnown RBP eCLIP17.86■□□□□ 0.45
NEK6-201ENST00000320246 WIZO95785 1651 aa17.86■□□□□ 0.45
NEK6-201ENST00000320246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.84■□□□□ 0.45
NEK6-201ENST00000320246 CCER1Q8TC90 406 aaPredicted RBP17.74■□□□□ 0.43
NEK6-201ENST00000320246 UNC13AQ9UPW8 1703 aa17.72■□□□□ 0.43
NEK6-201ENST00000320246 BAZ1AQ9NRL2 1556 aaPredicted RBP17.7■□□□□ 0.42
NEK6-201ENST00000320246 UBTFP17480 764 aaKnown RBP17.69■□□□□ 0.42
NEK6-201ENST00000320246 ZEB1P37275 1124 aaPredicted RBP17.65■□□□□ 0.42
NEK6-201ENST00000320246 SMARCA4P51532 1647 aa17.6■□□□□ 0.41
NEK6-201ENST00000320246 TOP2AP11388 1531 aaKnown RBP17.53■□□□□ 0.4
NEK6-201ENST00000320246 YTHDC1Q96MU7 727 aaKnown RBP17.53■□□□□ 0.4
NEK6-201ENST00000320246 BICRAQ9NZM4 1560 aa17.52■□□□□ 0.39
NEK6-201ENST00000320246 EIF4G1Q04637 1599 aaKnown RBP17.51■□□□□ 0.39
NEK6-201ENST00000320246 SCAF1Q9H7N4 1312 aaKnown RBP17.5■□□□□ 0.39
NEK6-201ENST00000320246 HNRNPUL2Q1KMD3 747 aaKnown RBP17.5■□□□□ 0.39
NEK6-201ENST00000320246 CCDC88BA6NC98 1476 aa17.49■□□□□ 0.39
NEK6-201ENST00000320246 SMARCA2P51531 1590 aa17.45■□□□□ 0.38
NEK6-201ENST00000320246 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
NEK6-201ENST00000320246 DIEXFQ68CQ4 756 aaKnown RBP17.33■□□□□ 0.36
NEK6-201ENST00000320246 ITGAEP38570 1179 aa17.31■□□□□ 0.36
NEK6-201ENST00000320246 NEUROD1Q13562 356 aa17.3■□□□□ 0.36
NEK6-201ENST00000320246 GTF3C3Q9Y5Q9 886 aa17.28■□□□□ 0.36
NEK6-201ENST00000320246 SOGA1O94964 1423 aa17.23■□□□□ 0.35
NEK6-201ENST00000320246 APLP2Q06481 763 aa17.22■□□□□ 0.35
NEK6-201ENST00000320246 PEG3Q9GZU2 1588 aa17.22■□□□□ 0.35
NEK6-201ENST00000320246 CENPBP07199 599 aaPredicted RBP17.22■□□□□ 0.35
NEK6-201ENST00000320246 ATP1B4Q9UN42 357 aaPredicted RBP17.22■□□□□ 0.35
NEK6-201ENST00000320246 ATAD2BQ9ULI0 1458 aa17.2■□□□□ 0.34
NEK6-201ENST00000320246 ACIN1Q9UKV3 1341 aaKnown RBP17.18■□□□□ 0.34
NEK6-201ENST00000320246 RUSC2Q8N2Y8 1516 aa17.17■□□□□ 0.34
NEK6-201ENST00000320246 BAZ1BQ9UIG0 1483 aaKnown RBP17.15■□□□□ 0.34
NEK6-201ENST00000320246 CSRNP3Q8WYN3 585 aa17.13■□□□□ 0.33
NEK6-201ENST00000320246 PELP1Q8IZL8 1130 aaKnown RBP17.12■□□□□ 0.33
NEK6-201ENST00000320246 WRNQ14191 1432 aaPredicted RBP eCLIP17.11■□□□□ 0.33
NEK6-201ENST00000320246 SYNJ1O43426 1573 aa17.05■□□□□ 0.32
NEK6-201ENST00000320246 CEP162Q5TB80 1403 aa17.04■□□□□ 0.32
NEK6-201ENST00000320246 EEA1Q15075 1411 aa16.99■□□□□ 0.31
NEK6-201ENST00000320246 TNIKQ9UKE5 1360 aa16.98■□□□□ 0.31
NEK6-201ENST00000320246 P3H3Q8IVL6 736 aa16.97■□□□□ 0.31
NEK6-201ENST00000320246 ZNF316A6NFI3 1004 aaPredicted RBP16.96■□□□□ 0.31
NEK6-201ENST00000320246 MIER1Q8N108 512 aa16.92■□□□□ 0.3
NEK6-201ENST00000320246 GOLGA3Q08378 1498 aa16.92■□□□□ 0.3
NEK6-201ENST00000320246 NCAPD3P42695 1498 aa16.86■□□□□ 0.29
NEK6-201ENST00000320246 CEP164Q9UPV0 1460 aa16.84■□□□□ 0.29
NEK6-201ENST00000320246 HMGXB3Q12766 1538 aa16.83■□□□□ 0.29
NEK6-201ENST00000320246 RAPGEF2Q9Y4G8 1499 aa16.81■□□□□ 0.28
NEK6-201ENST00000320246 TOP2BQ02880 1626 aa16.81■□□□□ 0.28
NEK6-201ENST00000320246 KIF21BO75037 1637 aa16.8■□□□□ 0.28
NEK6-201ENST00000320246 ARID3CA6NKF2 412 aa16.79■□□□□ 0.28
NEK6-201ENST00000320246 HIRIP3Q9BW71 556 aaPredicted RBP16.79■□□□□ 0.28
NEK6-201ENST00000320246 CNGB1Q14028 1251 aaPredicted RBP16.76■□□□□ 0.27
NEK6-201ENST00000320246 CLIP1P30622 1438 aa16.76■□□□□ 0.27
NEK6-201ENST00000320246 BIVM-ERCC5R4GMW8 1640 aa16.73■□□□□ 0.27
NEK6-201ENST00000320246 FAM50AQ14320 339 aaKnown RBP16.73■□□□□ 0.27
NEK6-201ENST00000320246 CUX1P39880 1505 aa16.73■□□□□ 0.27
NEK6-201ENST00000320246 KANK4Q5T7N3 995 aaPredicted RBP16.71■□□□□ 0.27
NEK6-201ENST00000320246 CFTRP13569 1480 aa16.7■□□□□ 0.26
NEK6-201ENST00000320246 BCANQ96GW7 911 aa16.69■□□□□ 0.26
NEK6-201ENST00000320246 VPS8Q8N3P4 1428 aa16.64■□□□□ 0.25
NEK6-201ENST00000320246 PRXQ9BXM0 1461 aa16.61■□□□□ 0.25
NEK6-201ENST00000320246 KIF27Q86VH2 1401 aa16.58■□□□□ 0.24
NEK6-201ENST00000320246 CC2D2AQ9P2K1 1620 aa16.58■□□□□ 0.24
NEK6-201ENST00000320246 CADPSQ9ULU8 1353 aa16.56■□□□□ 0.24
NEK6-201ENST00000320246 ERICH3Q5RHP9 1530 aa16.55■□□□□ 0.24
NEK6-201ENST00000320246 ARAP1Q96P48 1450 aa16.51■□□□□ 0.23
NEK6-201ENST00000320246 KCNH8Q96L42 1107 aa16.51■□□□□ 0.23
NEK6-201ENST00000320246 CUX2O14529 1486 aa16.5■□□□□ 0.23
NEK6-201ENST00000320246 PRDM2Q13029 1718 aa16.5■□□□□ 0.23
NEK6-201ENST00000320246 SIN3AQ96ST3 1273 aa16.5■□□□□ 0.23
NEK6-201ENST00000320246 SENP3-EIF4A1A0A087X0R7 540 aa16.48■□□□□ 0.23
NEK6-201ENST00000320246 FGD5Q6ZNL6 1462 aa16.46■□□□□ 0.23
NEK6-201ENST00000320246 DDX10Q13206 875 aaKnown RBP16.45■□□□□ 0.22
NEK6-201ENST00000320246 IGF1RP08069 1367 aa16.43■□□□□ 0.22
NEK6-201ENST00000320246 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms