Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 ACSF2-220ENST00000511288 838 ntTSL 1 (best)16.14■□□□□ 0.171e-6■■□□□ 14.1
NKRFO15226 ACSF2-215ENST00000508734 165 ntTSL 515.31■□□□□ 0.041e-6■■□□□ 14.1
NKRFO15226 ACSF2-214ENST00000508245 665 ntTSL 514.33□□□□□ -0.121e-6■■□□□ 14.1
NKRFO15226 ACSF2-216ENST00000509806 706 ntTSL 313.5□□□□□ -0.251e-6■■□□□ 14.1
NKRFO15226 ACSF2-210ENST00000506085 864 ntTSL 1 (best)13.19□□□□□ -0.31e-6■■□□□ 14.1
NKRFO15226 ACSF2-223ENST00000513101 564 ntTSL 410.03□□□□□ -0.81e-6■■□□□ 14.1
NKRFO15226 ACSF2-217ENST00000510262 407 ntTSL 59.85□□□□□ -0.831e-6■■□□□ 14.1
NKRFO15226 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.25■□□□□ 0.515e-7■■□□□ 14.1
NKRFO15226 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.095e-7■■□□□ 14.1
NKRFO15226 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.72□□□□□ -0.215e-7■■□□□ 14.1
NKRFO15226 DENND5B-206ENST00000545147 566 ntTSL 226.62■■□□□ 1.854e-7■■□□□ 14.1
NKRFO15226 DENND5B-205ENST00000544698 643 ntTSL 325.13■■□□□ 1.614e-7■■□□□ 14.1
NKRFO15226 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.71■□□□□ 0.754e-7■■□□□ 14.1
NKRFO15226 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.14e-7■■□□□ 14.1
NKRFO15226 PTMA-206ENST00000412128 863 ntTSL 328.61■■■□□ 2.173e-13■■□□□ 14.1
NKRFO15226 PTMA-207ENST00000440384 222 ntTSL 322.01■■□□□ 1.113e-13■■□□□ 14.1
NKRFO15226 PRDM2-209ENST00000491134 1100 ntTSL 320.64■□□□□ 0.894e-6■■□□□ 14.1
NKRFO15226 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC14.94□□□□□ -0.024e-6■■□□□ 14.1
NKRFO15226 PRDM2-214ENST00000505823 568 ntTSL 1 (best) BASIC13.93□□□□□ -0.184e-6■■□□□ 14.1
NKRFO15226 PRDM2-210ENST00000491815 658 ntTSL 213.4□□□□□ -0.264e-6■■□□□ 14.1
NKRFO15226 PRDM2-204ENST00000376048 2688 ntTSL 2 BASIC13.39□□□□□ -0.274e-6■■□□□ 14.1
NKRFO15226 PRDM2-205ENST00000407521 513 ntTSL 413.17□□□□□ -0.34e-6■■□□□ 14.1
NKRFO15226 PRDM2-211ENST00000502724 541 ntTSL 411.67□□□□□ -0.544e-6■■□□□ 14.1
NKRFO15226 PRDM2-212ENST00000502727 582 ntTSL 411.59□□□□□ -0.554e-6■■□□□ 14.1
NKRFO15226 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC8.68□□□□□ -1.024e-6■■□□□ 14.1
NKRFO15226 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.194e-6■■□□□ 14.1
NKRFO15226 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.284e-6■■□□□ 14.1
NKRFO15226 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.33□□□□□ -1.44e-6■■□□□ 14.1
NKRFO15226 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.67■■□□□ 1.546e-9■■□□□ 14
NKRFO15226 PFKFB4-205ENST00000417753 1744 ntTSL 1 (best)26.14■■□□□ 1.774e-11■■□□□ 14
NKRFO15226 PFKFB4-207ENST00000445633 1733 ntTSL 1 (best)26.14■■□□□ 1.774e-11■■□□□ 14
NKRFO15226 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.1■■□□□ 1.774e-11■■□□□ 14
NKRFO15226 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.81■■□□□ 1.724e-11■■□□□ 14
NKRFO15226 PFKFB4-213ENST00000490115 1757 ntTSL 1 (best)20.94■□□□□ 0.944e-11■■□□□ 14
NKRFO15226 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.44■■□□□ 1.821e-6■■□□□ 14
NKRFO15226 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.76■■□□□ 1.071e-6■■□□□ 14
NKRFO15226 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.561e-6■■□□□ 14
NKRFO15226 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.83■□□□□ 0.285e-6■■□□□ 14
NKRFO15226 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.87■□□□□ 0.135e-6■■□□□ 14
NKRFO15226 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC15.54■□□□□ 0.085e-6■■□□□ 14
NKRFO15226 FOXP4-AS1-201ENST00000414386 419 ntTSL 215.54■□□□□ 0.085e-6■■□□□ 14
NKRFO15226 FOXP4-AS1-204ENST00000440194 196 ntTSL 310.15□□□□□ -0.785e-6■■□□□ 14
NKRFO15226 SBF1-203ENST00000399627 811 ntTSL 520.73■□□□□ 0.912e-6■■□□□ 14
NKRFO15226 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.082e-6■■□□□ 14
NKRFO15226 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.12e-6■■□□□ 14
NKRFO15226 SHANK3-202ENST00000414786 7394 ntTSL 518.51■□□□□ 0.551e-6■■□□□ 14
NKRFO15226 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.211e-6■■□□□ 14
NKRFO15226 VAV2-204ENST00000472905 506 ntTSL 319.19■□□□□ 0.665e-7■■□□□ 14
NKRFO15226 RABGEF1-211ENST00000503687 4139 ntTSL 213.87□□□□□ -0.193e-9■■□□□ 14
NKRFO15226 TPM1-232ENST00000561425 582 ntTSL 523.95■■□□□ 1.421e-6■■□□□ 14
NKRFO15226 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.82■□□□□ 0.61e-6■■□□□ 14
NKRFO15226 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.57■□□□□ 0.561e-6■■□□□ 14
NKRFO15226 TPM1-228ENST00000560975 2855 ntTSL 518.35■□□□□ 0.531e-6■■□□□ 14
NKRFO15226 TPM1-211ENST00000558314 1031 ntTSL 1 (best)18.11■□□□□ 0.491e-6■■□□□ 14
NKRFO15226 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.04■□□□□ 0.481e-6■■□□□ 14
NKRFO15226 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.451e-6■■□□□ 14
NKRFO15226 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.351e-6■■□□□ 14
NKRFO15226 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.45■□□□□ 0.221e-6■■□□□ 14
NKRFO15226 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.43■□□□□ 0.221e-6■■□□□ 14
NKRFO15226 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.051e-6■■□□□ 14
NKRFO15226 TPM1-227ENST00000560970 1039 ntTSL 1 (best)12.55□□□□□ -0.41e-6■■□□□ 14
NKRFO15226 TPM1-212ENST00000558347 1525 ntTSL 511.77□□□□□ -0.521e-6■■□□□ 14
NKRFO15226 TPM1-233ENST00000610733 3957 ntTSL 2 BASIC10.52□□□□□ -0.731e-6■■□□□ 14
NKRFO15226 GPRC5C-203ENST00000392628 1529 ntAPPRIS ALT2 TSL 523.88■■□□□ 1.416e-7■■□□□ 14
NKRFO15226 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.71■■□□□ 1.076e-7■■□□□ 14
NKRFO15226 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.73■□□□□ 0.756e-7■■□□□ 14
NKRFO15226 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.276e-7■■□□□ 14
NKRFO15226 ZBTB20-218ENST00000488663 1495 ntTSL 1 (best)6.92□□□□□ -1.33e-6■■□□□ 14
NKRFO15226 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.863e-6■■□□□ 14
NKRFO15226 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.191e-10■■□□□ 14
NKRFO15226 TMEM63B-205ENST00000525294 916 ntTSL 225.79■■□□□ 1.722e-7■■□□□ 14
NKRFO15226 CNOT2-206ENST00000547780 582 ntTSL 524.33■■□□□ 1.492e-7■■□□□ 14
NKRFO15226 GRINA-205ENST00000529301 1075 ntTSL 323.41■■□□□ 1.342e-7■■□□□ 14
NKRFO15226 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.322e-7■■□□□ 14
NKRFO15226 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.312e-7■■□□□ 14
NKRFO15226 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.22e-7■■□□□ 14
NKRFO15226 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.192e-7■■□□□ 14
NKRFO15226 CTSB-206ENST00000524500 573 ntTSL 421.9■■□□□ 1.12e-7■■□□□ 14
NKRFO15226 CTSB-233ENST00000534636 633 ntTSL 421.6■■□□□ 1.052e-7■■□□□ 14
NKRFO15226 CNOT2-227ENST00000551043 2288 ntTSL 221.31■■□□□ 12e-7■■□□□ 14
NKRFO15226 TCF25-207ENST00000562256 1879 ntTSL 1 (best)20.26■□□□□ 0.832e-7■■□□□ 14
NKRFO15226 CNOT2-236ENST00000552231 1545 ntTSL 220.22■□□□□ 0.832e-7■■□□□ 14
NKRFO15226 CTSB-226ENST00000532656 573 ntTSL 420.13■□□□□ 0.812e-7■■□□□ 14
NKRFO15226 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.782e-7■■□□□ 14
NKRFO15226 CTSB-222ENST00000531551 1855 ntTSL 1 (best)19.87■□□□□ 0.772e-7■■□□□ 14
NKRFO15226 CTSB-229ENST00000533572 975 ntTSL 319.7■□□□□ 0.742e-7■■□□□ 14
NKRFO15226 TCF25-204ENST00000561958 763 ntTSL 319.69■□□□□ 0.742e-7■■□□□ 14
NKRFO15226 TCF25-222ENST00000568412 797 ntTSL 319.69■□□□□ 0.742e-7■■□□□ 14
NKRFO15226 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.742e-7■■□□□ 14
NKRFO15226 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.722e-7■■□□□ 14
NKRFO15226 CTSB-213ENST00000527215 545 ntTSL 418.65■□□□□ 0.582e-7■■□□□ 14
NKRFO15226 CTSB-210ENST00000526195 560 ntTSL 418.61■□□□□ 0.572e-7■■□□□ 14
NKRFO15226 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.552e-7■■□□□ 14
NKRFO15226 CTSB-215ENST00000528965 556 ntTSL 318.34■□□□□ 0.532e-7■■□□□ 14
NKRFO15226 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.532e-7■■□□□ 14
NKRFO15226 GRINA-206ENST00000530898 558 ntTSL 218.27■□□□□ 0.522e-7■■□□□ 14
NKRFO15226 DRD4-202ENST00000528733 361 ntTSL 318.15■□□□□ 0.51e-10■■□□□ 14
NKRFO15226 CNOT2-209ENST00000548159 2549 ntTSL 1 (best)18.08■□□□□ 0.492e-7■■□□□ 14
NKRFO15226 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.482e-7■■□□□ 14
NKRFO15226 AKT2-212ENST00000441941 974 ntTSL 418.02■□□□□ 0.482e-7■■□□□ 14
Retrieved 100 of 9,198 protein–RNA pairs in 245.4 ms