RNA–Protein interactions for RNA: ENST00000399627.3

SBF1-203, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-203ENST00000399627 NISCHQ9Y2I1 1504 aa43.71■■■■■ 4.59
SBF1-203ENST00000399627 CCDC180Q9P1Z9 1646 aa38.76■■■■□ 3.8
SBF1-203ENST00000399627 ABCC9O60706 1549 aa37.72■■■■□ 3.63
SBF1-203ENST00000399627 ZCCHC6Q5VYS8 1495 aaKnown RBP36.45■■■■□ 3.43
SBF1-203ENST00000399627 DCAF8L2P0C7V8 631 aa36.45■■■■□ 3.43
SBF1-203ENST00000399627 NACADO15069 1562 aa36.37■■■■□ 3.41
SBF1-203ENST00000399627 RB1CC1Q8TDY2 1594 aa36.36■■■■□ 3.41
SBF1-203ENST00000399627 MYO15BQ96JP2 1530 aa36.2■■■■□ 3.39
SBF1-203ENST00000399627 DCAF1Q9Y4B6 1507 aa36.14■■■■□ 3.38
SBF1-203ENST00000399627 UNC13AQ9UPW8 1703 aa35.62■■■■□ 3.29
SBF1-203ENST00000399627 SCRIBQ14160 1630 aa35.42■■■■□ 3.26
SBF1-203ENST00000399627 PABPN1Q86U42 306 aaKnown RBP eCLIP35.29■■■■□ 3.24
SBF1-203ENST00000399627 BICRAQ9NZM4 1560 aa35.28■■■■□ 3.24
SBF1-203ENST00000399627 SHROOM4Q9ULL8 1493 aa34.85■■■■□ 3.17
SBF1-203ENST00000399627 DNAJC5BQ9UF47 199 aa34.41■■■■□ 3.1
SBF1-203ENST00000399627 EIF4G1Q04637 1599 aaKnown RBP34.31■■■■□ 3.08
SBF1-203ENST00000399627 CC2D2AQ9P2K1 1620 aa34.13■■■■□ 3.05
SBF1-203ENST00000399627 CECR2Q9BXF3 1484 aa34.05■■■■□ 3.04
SBF1-203ENST00000399627 SMARCA4P51532 1647 aa33.89■■■■□ 3.02
SBF1-203ENST00000399627 BAZ1AQ9NRL2 1556 aaPredicted RBP33.85■■■■□ 3.01
SBF1-203ENST00000399627 MROH2BQ7Z745 1585 aa33.72■■■□□ 2.99
SBF1-203ENST00000399627 ATAD2BQ9ULI0 1458 aa33.63■■■□□ 2.97
SBF1-203ENST00000399627 SMARCA2P51531 1590 aa33.59■■■□□ 2.97
SBF1-203ENST00000399627 NCAPD3P42695 1498 aa33.55■■■□□ 2.96
SBF1-203ENST00000399627 PEG3Q9GZU2 1588 aa33.51■■■□□ 2.96
SBF1-203ENST00000399627 HMGXB3Q12766 1538 aa33.41■■■□□ 2.94
SBF1-203ENST00000399627 RSF1Q96T23 1441 aaPredicted RBP33.39■■■□□ 2.94
SBF1-203ENST00000399627 WIZO95785 1651 aa33.39■■■□□ 2.94
SBF1-203ENST00000399627 BAZ1BQ9UIG0 1483 aaKnown RBP33.36■■■□□ 2.93
SBF1-203ENST00000399627 TOP2AP11388 1531 aaKnown RBP33.01■■■□□ 2.87
SBF1-203ENST00000399627 SUPT5HO00267 1087 aaKnown RBP32.76■■■□□ 2.83
SBF1-203ENST00000399627 NESP48681 1621 aa32.72■■■□□ 2.83
SBF1-203ENST00000399627 LAMC3Q9Y6N6 1575 aa32.63■■■□□ 2.81
SBF1-203ENST00000399627 CCDC88BA6NC98 1476 aa32.62■■■□□ 2.81
SBF1-203ENST00000399627 CADPSQ9ULU8 1353 aa32.59■■■□□ 2.81
SBF1-203ENST00000399627 ERCC6Q03468 1493 aa32.47■■■□□ 2.79
SBF1-203ENST00000399627 CFTRP13569 1480 aa32.45■■■□□ 2.79
SBF1-203ENST00000399627 PDS5BQ9NTI5 1447 aa32.4■■■□□ 2.78
SBF1-203ENST00000399627 KIF21AQ7Z4S6 1674 aa32.37■■■□□ 2.77
SBF1-203ENST00000399627 PRDM2Q13029 1718 aa32.29■■■□□ 2.76
SBF1-203ENST00000399627 FANCD2Q9BXW9 1451 aa32.23■■■□□ 2.75
SBF1-203ENST00000399627 CEP164Q9UPV0 1460 aa32.16■■■□□ 2.74
SBF1-203ENST00000399627 THOC2Q8NI27 1593 aaKnown RBP32.16■■■□□ 2.74
SBF1-203ENST00000399627 MRC2Q9UBG0 1479 aa32.07■■■□□ 2.72
SBF1-203ENST00000399627 CUX2O14529 1486 aa32.02■■■□□ 2.72
SBF1-203ENST00000399627 WDR62O43379 1518 aa31.95■■■□□ 2.71
SBF1-203ENST00000399627 URB2Q14146 1524 aaKnown RBP31.9■■■□□ 2.7
SBF1-203ENST00000399627 TOPBP1Q92547 1522 aa31.75■■■□□ 2.67
SBF1-203ENST00000399627 DNMBPQ6XZF7 1577 aa31.73■■■□□ 2.67
SBF1-203ENST00000399627 ABCC8Q09428 1581 aa31.73■■■□□ 2.67
SBF1-203ENST00000399627 CUX1P39880 1505 aa31.61■■■□□ 2.65
SBF1-203ENST00000399627 POLA1P09884 1462 aaPredicted RBP31.49■■■□□ 2.63
SBF1-203ENST00000399627 WRNQ14191 1432 aaPredicted RBP eCLIP31.48■■■□□ 2.63
SBF1-203ENST00000399627 IFT140Q96RY7 1462 aa31.47■■■□□ 2.63
SBF1-203ENST00000399627 FGD5Q6ZNL6 1462 aa31.46■■■□□ 2.63
SBF1-203ENST00000399627 SYNJ1O43426 1573 aa31.42■■■□□ 2.62
SBF1-203ENST00000399627 BIVM-ERCC5R4GMW8 1640 aa31.4■■■□□ 2.62
SBF1-203ENST00000399627 TOP2BQ02880 1626 aa31.39■■■□□ 2.62
SBF1-203ENST00000399627 TARBP1Q13395 1621 aaKnown RBP31.39■■■□□ 2.62
SBF1-203ENST00000399627 RAD54L2Q9Y4B4 1467 aa31.38■■■□□ 2.61
SBF1-203ENST00000399627 SOGA1O94964 1423 aa31.37■■■□□ 2.61
SBF1-203ENST00000399627 ZNF608Q9ULD9 1512 aaPredicted RBP31.34■■■□□ 2.61
SBF1-203ENST00000399627 EIF4G3O43432 1585 aaKnown RBP31.22■■■□□ 2.59
SBF1-203ENST00000399627 WDR97A6NE52 1622 aa31.21■■■□□ 2.59
SBF1-203ENST00000399627 AQRO60306 1485 aaKnown RBP eCLIP31.19■■■□□ 2.581e-9■■■■■ 35.6
SBF1-203ENST00000399627 TDRD9Q8NDG6 1382 aaKnown RBP31.17■■■□□ 2.58
SBF1-203ENST00000399627 ABCA10Q8WWZ4 1543 aa31.15■■■□□ 2.58
SBF1-203ENST00000399627 ABCA5Q8WWZ7 1642 aa31.02■■■□□ 2.56
SBF1-203ENST00000399627 GAPVD1Q14C86 1478 aa31.01■■■□□ 2.55
SBF1-203ENST00000399627 PBRM1Q86U86 1689 aa30.97■■■□□ 2.55
SBF1-203ENST00000399627 GRIN2BQ13224 1484 aa30.96■■■□□ 2.55
SBF1-203ENST00000399627 TRIM41Q8WV44 630 aa30.91■■■□□ 2.54
SBF1-203ENST00000399627 SNAPC4Q5SXM2 1469 aa30.9■■■□□ 2.54
SBF1-203ENST00000399627 MAGI1Q96QZ7 1491 aaPredicted RBP30.85■■■□□ 2.53
SBF1-203ENST00000399627 CHD1O14646 1710 aa30.83■■■□□ 2.53
SBF1-203ENST00000399627 KIF27Q86VH2 1401 aa30.8■■■□□ 2.52
SBF1-203ENST00000399627 ERICH3Q5RHP9 1530 aa30.78■■■□□ 2.52
SBF1-203ENST00000399627 FBLN2P98095 1184 aa30.77■■■□□ 2.52
SBF1-203ENST00000399627 DNAJC5Q9H3Z4 198 aa30.77■■■□□ 2.52
SBF1-203ENST00000399627 OSCARQ8IYS5 282 aa30.75■■■□□ 2.51
SBF1-203ENST00000399627 SYNJ2O15056 1496 aa30.73■■■□□ 2.51
SBF1-203ENST00000399627 ADAMTS12P58397 1594 aa30.71■■■□□ 2.51
SBF1-203ENST00000399627 CHIC1Q5VXU3 224 aa30.71■■■□□ 2.51
SBF1-203ENST00000399627 CHMP7Q8WUX9 453 aaPredicted RBP30.7■■■□□ 2.51
SBF1-203ENST00000399627 IGF1RP08069 1367 aa30.65■■■□□ 2.5
SBF1-203ENST00000399627 FHAD1B1AJZ9 1412 aa30.64■■■□□ 2.5
SBF1-203ENST00000399627 RUSC2Q8N2Y8 1516 aa30.63■■■□□ 2.49
SBF1-203ENST00000399627 GRIN2AQ12879 1464 aa30.57■■■□□ 2.48
SBF1-203ENST00000399627 CUL7Q14999 1698 aa30.56■■■□□ 2.48
SBF1-203ENST00000399627 CARMIL1Q5VZK9 1371 aa30.48■■■□□ 2.47
SBF1-203ENST00000399627 CLASP1Q7Z460 1538 aa30.44■■■□□ 2.46
SBF1-203ENST00000399627 CEP170Q5SW79 1584 aa30.43■■■□□ 2.46
SBF1-203ENST00000399627 NUP160Q12769 1436 aa30.42■■■□□ 2.46
SBF1-203ENST00000399627 EEA1Q15075 1411 aa30.35■■■□□ 2.45
SBF1-203ENST00000399627 RAPGEF2Q9Y4G8 1499 aa30.31■■■□□ 2.44
SBF1-203ENST00000399627 FAM9AQ8IZU1 332 aaPredicted RBP30.3■■■□□ 2.44
SBF1-203ENST00000399627 CSRNP3Q8WYN3 585 aa30.3■■■□□ 2.44
SBF1-203ENST00000399627 ARHGEF11O15085 1522 aa30.27■■■□□ 2.44
SBF1-203ENST00000399627 PRXQ9BXM0 1461 aa30.26■■■□□ 2.44
SBF1-203ENST00000399627 RIMBP3CA6NJZ7 1639 aa30.26■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms