RNA–Protein interactions for RNA: ENST00000531089.5

CTSB-220, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-220ENST00000531089 NISCHQ9Y2I1 1504 aa38.5■■■■□ 3.75
CTSB-220ENST00000531089 CCDC180Q9P1Z9 1646 aa34.39■■■■□ 3.1
CTSB-220ENST00000531089 ABCC9O60706 1549 aa34.31■■■■□ 3.08
CTSB-220ENST00000531089 RB1CC1Q8TDY2 1594 aa32.68■■■□□ 2.82
CTSB-220ENST00000531089 NACADO15069 1562 aa32.52■■■□□ 2.8
CTSB-220ENST00000531089 DCAF8L2P0C7V8 631 aa32.51■■■□□ 2.8
CTSB-220ENST00000531089 DNAJC5BQ9UF47 199 aa32.21■■■□□ 2.75
CTSB-220ENST00000531089 MYO15BQ96JP2 1530 aa32.14■■■□□ 2.74
CTSB-220ENST00000531089 PABPN1Q86U42 306 aaKnown RBP eCLIP32.05■■■□□ 2.72
CTSB-220ENST00000531089 UNC13AQ9UPW8 1703 aa32.01■■■□□ 2.71
CTSB-220ENST00000531089 ZCCHC6Q5VYS8 1495 aaKnown RBP31.9■■■□□ 2.7
CTSB-220ENST00000531089 BICRAQ9NZM4 1560 aa31.8■■■□□ 2.68
CTSB-220ENST00000531089 DCAF1Q9Y4B6 1507 aa31.79■■■□□ 2.68
CTSB-220ENST00000531089 SCRIBQ14160 1630 aa31.36■■■□□ 2.61
CTSB-220ENST00000531089 SHROOM4Q9ULL8 1493 aa31.26■■■□□ 2.59
CTSB-220ENST00000531089 CC2D2AQ9P2K1 1620 aa30.99■■■□□ 2.55
CTSB-220ENST00000531089 EIF4G1Q04637 1599 aaKnown RBP30.95■■■□□ 2.55
CTSB-220ENST00000531089 CECR2Q9BXF3 1484 aa30.87■■■□□ 2.53
CTSB-220ENST00000531089 NCAPD3P42695 1498 aa30.08■■■□□ 2.41
CTSB-220ENST00000531089 ATAD2BQ9ULI0 1458 aa29.99■■■□□ 2.39
CTSB-220ENST00000531089 SMARCA4P51532 1647 aa29.96■■■□□ 2.39
CTSB-220ENST00000531089 SMARCA2P51531 1590 aa29.86■■■□□ 2.37
CTSB-220ENST00000531089 BAZ1AQ9NRL2 1556 aaPredicted RBP29.82■■■□□ 2.36
CTSB-220ENST00000531089 HMGXB3Q12766 1538 aa29.78■■■□□ 2.36
CTSB-220ENST00000531089 MROH2BQ7Z745 1585 aa29.68■■■□□ 2.34
CTSB-220ENST00000531089 PEG3Q9GZU2 1588 aa29.68■■■□□ 2.34
CTSB-220ENST00000531089 BAZ1BQ9UIG0 1483 aaKnown RBP29.65■■■□□ 2.34
CTSB-220ENST00000531089 ERCC6Q03468 1493 aa29.55■■■□□ 2.32
CTSB-220ENST00000531089 NESP48681 1621 aa29.55■■■□□ 2.32
CTSB-220ENST00000531089 CUX2O14529 1486 aa29.46■■■□□ 2.31
CTSB-220ENST00000531089 DNAJC5Q9H3Z4 198 aa29.41■■■□□ 2.3
CTSB-220ENST00000531089 WIZO95785 1651 aa29.33■■■□□ 2.29
CTSB-220ENST00000531089 LAMC3Q9Y6N6 1575 aa29.31■■■□□ 2.28
CTSB-220ENST00000531089 CADPSQ9ULU8 1353 aa29.18■■■□□ 2.26
CTSB-220ENST00000531089 PDS5BQ9NTI5 1447 aa29.16■■■□□ 2.26
CTSB-220ENST00000531089 RSF1Q96T23 1441 aaPredicted RBP29.15■■■□□ 2.26
CTSB-220ENST00000531089 THOC2Q8NI27 1593 aaKnown RBP29.13■■■□□ 2.25
CTSB-220ENST00000531089 KIF21AQ7Z4S6 1674 aa29.12■■■□□ 2.25
CTSB-220ENST00000531089 TOP2AP11388 1531 aaKnown RBP28.91■■■□□ 2.22
CTSB-220ENST00000531089 CFTRP13569 1480 aa28.86■■■□□ 2.21
CTSB-220ENST00000531089 MRC2Q9UBG0 1479 aa28.86■■■□□ 2.21
CTSB-220ENST00000531089 FANCD2Q9BXW9 1451 aa28.79■■■□□ 2.2
CTSB-220ENST00000531089 WDR62O43379 1518 aa28.79■■■□□ 2.2
CTSB-220ENST00000531089 CEP164Q9UPV0 1460 aa28.77■■■□□ 2.2
CTSB-220ENST00000531089 CCDC88BA6NC98 1476 aa28.67■■■□□ 2.18
CTSB-220ENST00000531089 URB2Q14146 1524 aaKnown RBP28.56■■■□□ 2.16
CTSB-220ENST00000531089 PRDM2Q13029 1718 aa28.51■■■□□ 2.15
CTSB-220ENST00000531089 TOPBP1Q92547 1522 aa28.28■■■□□ 2.12
CTSB-220ENST00000531089 OSCARQ8IYS5 282 aa28.26■■■□□ 2.12
CTSB-220ENST00000531089 ABCC8Q09428 1581 aa28.23■■■□□ 2.11
CTSB-220ENST00000531089 IFT140Q96RY7 1462 aa28.21■■■□□ 2.11
CTSB-220ENST00000531089 ZNF608Q9ULD9 1512 aaPredicted RBP28.2■■■□□ 2.11
CTSB-220ENST00000531089 DNMBPQ6XZF7 1577 aa28.15■■■□□ 2.1
CTSB-220ENST00000531089 TRIM41Q8WV44 630 aa28.12■■■□□ 2.09
CTSB-220ENST00000531089 TARBP1Q13395 1621 aaKnown RBP28.02■■■□□ 2.08
CTSB-220ENST00000531089 SUPT5HO00267 1087 aaKnown RBP28.01■■■□□ 2.08
CTSB-220ENST00000531089 AQRO60306 1485 aaKnown RBP eCLIP28■■■□□ 2.073e-7■■■■■ 33.7
CTSB-220ENST00000531089 POLA1P09884 1462 aaPredicted RBP27.99■■■□□ 2.07
CTSB-220ENST00000531089 EIF4G3O43432 1585 aaKnown RBP27.97■■■□□ 2.07
CTSB-220ENST00000531089 RAD54L2Q9Y4B4 1467 aa27.93■■■□□ 2.06
CTSB-220ENST00000531089 SOGA1O94964 1423 aa27.92■■■□□ 2.06
CTSB-220ENST00000531089 TDRD9Q8NDG6 1382 aaKnown RBP27.85■■■□□ 2.05
CTSB-220ENST00000531089 CUX1P39880 1505 aa27.85■■■□□ 2.05
CTSB-220ENST00000531089 FGD5Q6ZNL6 1462 aa27.84■■■□□ 2.05
CTSB-220ENST00000531089 RIMBP3CA6NJZ7 1639 aa27.78■■■□□ 2.04
CTSB-220ENST00000531089 RIMBP3BA6NNM3 1639 aa27.78■■■□□ 2.04
CTSB-220ENST00000531089 RIMBP3Q9UFD9 1639 aa27.78■■■□□ 2.04
CTSB-220ENST00000531089 FBLN2P98095 1184 aa27.77■■■□□ 2.04
CTSB-220ENST00000531089 CHD1O14646 1710 aa27.77■■■□□ 2.04
CTSB-220ENST00000531089 ARHGEF11O15085 1522 aa27.7■■■□□ 2.02
CTSB-220ENST00000531089 WDR97A6NE52 1622 aa27.67■■■□□ 2.02
CTSB-220ENST00000531089 SNAPC4Q5SXM2 1469 aa27.63■■■□□ 2.01
CTSB-220ENST00000531089 CYB5RLQ6IPT4 315 aa27.6■■■□□ 2.01
CTSB-220ENST00000531089 CHMP7Q8WUX9 453 aaPredicted RBP27.6■■■□□ 2.01
CTSB-220ENST00000531089 GRIN2BQ13224 1484 aa27.6■■■□□ 2.01
CTSB-220ENST00000531089 MAGI1Q96QZ7 1491 aaPredicted RBP27.56■■■□□ 2
CTSB-220ENST00000531089 GAPVD1Q14C86 1478 aa27.55■■■□□ 2
CTSB-220ENST00000531089 ABCA10Q8WWZ4 1543 aa27.54■■■□□ 2
CTSB-220ENST00000531089 SYNJ2O15056 1496 aa27.49■■□□□ 1.99
CTSB-220ENST00000531089 PBRM1Q86U86 1689 aa27.47■■□□□ 1.99
CTSB-220ENST00000531089 WRNQ14191 1432 aaPredicted RBP eCLIP27.46■■□□□ 1.99
CTSB-220ENST00000531089 CLASP1Q7Z460 1538 aa27.45■■□□□ 1.99
CTSB-220ENST00000531089 ARAP1Q96P48 1450 aa27.45■■□□□ 1.98
CTSB-220ENST00000531089 ABCA5Q8WWZ7 1642 aa27.44■■□□□ 1.98
CTSB-220ENST00000531089 TOP2BQ02880 1626 aa27.44■■□□□ 1.98
CTSB-220ENST00000531089 SYNJ1O43426 1573 aa27.42■■□□□ 1.98
CTSB-220ENST00000531089 BIVM-ERCC5R4GMW8 1640 aa27.42■■□□□ 1.98
CTSB-220ENST00000531089 GRIN2AQ12879 1464 aa27.24■■□□□ 1.95
CTSB-220ENST00000531089 ADAMTS12P58397 1594 aa27.2■■□□□ 1.94
CTSB-220ENST00000531089 FHAD1B1AJZ9 1412 aa27.19■■□□□ 1.94
CTSB-220ENST00000531089 TRHP20396 242 aaPredicted RBP27.19■■□□□ 1.94
CTSB-220ENST00000531089 ERICH3Q5RHP9 1530 aa27.18■■□□□ 1.94
CTSB-220ENST00000531089 NUP160Q12769 1436 aa27.16■■□□□ 1.94
CTSB-220ENST00000531089 CEP170Q5SW79 1584 aa27.13■■□□□ 1.93
CTSB-220ENST00000531089 ERCC6L2Q5T890 1561 aa27.08■■□□□ 1.93
CTSB-220ENST00000531089 SHROOM2Q13796 1616 aa27.01■■□□□ 1.91
CTSB-220ENST00000531089 JPH4Q96JJ6 628 aa26.99■■□□□ 1.91
CTSB-220ENST00000531089 IGF1RP08069 1367 aa26.98■■□□□ 1.91
CTSB-220ENST00000531089 KIF27Q86VH2 1401 aa26.91■■□□□ 1.9
CTSB-220ENST00000531089 PRG4Q92954 1404 aaPredicted RBP26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms