RNA–Protein interactions for RNA: ENST00000440384.1

PTMA-207, Transcript of prothymosin alpha, humanhuman

TSL 3

Gene PTMA, Length 222 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-207ENST00000440384 NISCHQ9Y2I1 1504 aa46.04■■■■■ 4.96
PTMA-207ENST00000440384 CCDC180Q9P1Z9 1646 aa40.89■■■■■ 4.14
PTMA-207ENST00000440384 ABCC9O60706 1549 aa40.08■■■■■ 4.01
PTMA-207ENST00000440384 DCAF8L2P0C7V8 631 aa38.69■■■■□ 3.78
PTMA-207ENST00000440384 RB1CC1Q8TDY2 1594 aa38.59■■■■□ 3.77
PTMA-207ENST00000440384 NACADO15069 1562 aa38.53■■■■□ 3.76
PTMA-207ENST00000440384 ZCCHC6Q5VYS8 1495 aaKnown RBP38.33■■■■□ 3.73
PTMA-207ENST00000440384 MYO15BQ96JP2 1530 aa38.29■■■■□ 3.72
PTMA-207ENST00000440384 DCAF1Q9Y4B6 1507 aa38.11■■■■□ 3.69
PTMA-207ENST00000440384 PABPN1Q86U42 306 aaKnown RBP eCLIP37.51■■■■□ 3.6
PTMA-207ENST00000440384 UNC13AQ9UPW8 1703 aa37.46■■■■□ 3.59
PTMA-207ENST00000440384 SCRIBQ14160 1630 aa37.33■■■■□ 3.57
PTMA-207ENST00000440384 BICRAQ9NZM4 1560 aa37.25■■■■□ 3.55
PTMA-207ENST00000440384 SHROOM4Q9ULL8 1493 aa37.06■■■■□ 3.52
PTMA-207ENST00000440384 DNAJC5BQ9UF47 199 aa36.71■■■■□ 3.47
PTMA-207ENST00000440384 EIF4G1Q04637 1599 aaKnown RBP36.36■■■■□ 3.41
PTMA-207ENST00000440384 CC2D2AQ9P2K1 1620 aa36.2■■■■□ 3.39
PTMA-207ENST00000440384 CECR2Q9BXF3 1484 aa36.05■■■■□ 3.36
PTMA-207ENST00000440384 BAZ1AQ9NRL2 1556 aaPredicted RBP35.74■■■■□ 3.31
PTMA-207ENST00000440384 SMARCA4P51532 1647 aa35.69■■■■□ 3.3
PTMA-207ENST00000440384 SMARCA2P51531 1590 aa35.55■■■■□ 3.28
PTMA-207ENST00000440384 NCAPD3P42695 1498 aa35.55■■■■□ 3.28
PTMA-207ENST00000440384 ATAD2BQ9ULI0 1458 aa35.54■■■■□ 3.28
PTMA-207ENST00000440384 MROH2BQ7Z745 1585 aa35.43■■■■□ 3.26
PTMA-207ENST00000440384 HMGXB3Q12766 1538 aa35.35■■■■□ 3.25
PTMA-207ENST00000440384 PEG3Q9GZU2 1588 aa35.34■■■■□ 3.25
PTMA-207ENST00000440384 BAZ1BQ9UIG0 1483 aaKnown RBP35.32■■■■□ 3.24
PTMA-207ENST00000440384 RSF1Q96T23 1441 aaPredicted RBP35.09■■■■□ 3.21
PTMA-207ENST00000440384 WIZO95785 1651 aa35.02■■■■□ 3.2
PTMA-207ENST00000440384 TOP2AP11388 1531 aaKnown RBP34.74■■■■□ 3.15
PTMA-207ENST00000440384 ERCC6Q03468 1493 aa34.67■■■■□ 3.14
PTMA-207ENST00000440384 NESP48681 1621 aa34.62■■■■□ 3.13
PTMA-207ENST00000440384 LAMC3Q9Y6N6 1575 aa34.61■■■■□ 3.13
PTMA-207ENST00000440384 CADPSQ9ULU8 1353 aa34.56■■■■□ 3.12
PTMA-207ENST00000440384 PDS5BQ9NTI5 1447 aa34.49■■■■□ 3.11
PTMA-207ENST00000440384 SUPT5HO00267 1087 aaKnown RBP34.34■■■■□ 3.09
PTMA-207ENST00000440384 CCDC88BA6NC98 1476 aa34.33■■■■□ 3.09
PTMA-207ENST00000440384 CFTRP13569 1480 aa34.3■■■■□ 3.08
PTMA-207ENST00000440384 CUX2O14529 1486 aa34.24■■■■□ 3.07
PTMA-207ENST00000440384 KIF21AQ7Z4S6 1674 aa34.15■■■■□ 3.06
PTMA-207ENST00000440384 FANCD2Q9BXW9 1451 aa34.14■■■■□ 3.06
PTMA-207ENST00000440384 CEP164Q9UPV0 1460 aa34.12■■■■□ 3.05
PTMA-207ENST00000440384 MRC2Q9UBG0 1479 aa34.06■■■■□ 3.04
PTMA-207ENST00000440384 THOC2Q8NI27 1593 aaKnown RBP34.06■■■■□ 3.04
PTMA-207ENST00000440384 PRDM2Q13029 1718 aa33.91■■■■□ 3.02
PTMA-207ENST00000440384 WDR62O43379 1518 aa33.87■■■■□ 3.01
PTMA-207ENST00000440384 URB2Q14146 1524 aaKnown RBP33.72■■■□□ 2.99
PTMA-207ENST00000440384 ABCC8Q09428 1581 aa33.68■■■□□ 2.98
PTMA-207ENST00000440384 TOPBP1Q92547 1522 aa33.55■■■□□ 2.96
PTMA-207ENST00000440384 DNMBPQ6XZF7 1577 aa33.51■■■□□ 2.96
PTMA-207ENST00000440384 IFT140Q96RY7 1462 aa33.42■■■□□ 2.94
PTMA-207ENST00000440384 POLA1P09884 1462 aaPredicted RBP33.26■■■□□ 2.92
PTMA-207ENST00000440384 CUX1P39880 1505 aa33.25■■■□□ 2.91
PTMA-207ENST00000440384 SOGA1O94964 1423 aa33.21■■■□□ 2.91
PTMA-207ENST00000440384 DNAJC5Q9H3Z4 198 aa33.21■■■□□ 2.91
PTMA-207ENST00000440384 FGD5Q6ZNL6 1462 aa33.2■■■□□ 2.91
PTMA-207ENST00000440384 WRNQ14191 1432 aaPredicted RBP eCLIP33.15■■■□□ 2.9
PTMA-207ENST00000440384 ZNF608Q9ULD9 1512 aaPredicted RBP33.15■■■□□ 2.9
PTMA-207ENST00000440384 RAD54L2Q9Y4B4 1467 aa33.12■■■□□ 2.89
PTMA-207ENST00000440384 TARBP1Q13395 1621 aaKnown RBP33.1■■■□□ 2.89
PTMA-207ENST00000440384 AQRO60306 1485 aaKnown RBP eCLIP33.03■■■□□ 2.881e-27■■□□□ 12.9
PTMA-207ENST00000440384 EIF4G3O43432 1585 aaKnown RBP33.01■■■□□ 2.88
PTMA-207ENST00000440384 TDRD9Q8NDG6 1382 aaKnown RBP33■■■□□ 2.87
PTMA-207ENST00000440384 TOP2BQ02880 1626 aa32.99■■■□□ 2.87
PTMA-207ENST00000440384 WDR97A6NE52 1622 aa32.96■■■□□ 2.87
PTMA-207ENST00000440384 BIVM-ERCC5R4GMW8 1640 aa32.94■■■□□ 2.86
PTMA-207ENST00000440384 SYNJ1O43426 1573 aa32.93■■■□□ 2.86
PTMA-207ENST00000440384 OSCARQ8IYS5 282 aa32.93■■■□□ 2.86
PTMA-207ENST00000440384 ABCA10Q8WWZ4 1543 aa32.88■■■□□ 2.85
PTMA-207ENST00000440384 GRIN2BQ13224 1484 aa32.82■■■□□ 2.84
PTMA-207ENST00000440384 GAPVD1Q14C86 1478 aa32.8■■■□□ 2.84
PTMA-207ENST00000440384 FBLN2P98095 1184 aa32.8■■■□□ 2.84
PTMA-207ENST00000440384 SNAPC4Q5SXM2 1469 aa32.73■■■□□ 2.83
PTMA-207ENST00000440384 MAGI1Q96QZ7 1491 aaPredicted RBP32.73■■■□□ 2.83
PTMA-207ENST00000440384 CHMP7Q8WUX9 453 aaPredicted RBP32.71■■■□□ 2.83
PTMA-207ENST00000440384 ABCA5Q8WWZ7 1642 aa32.67■■■□□ 2.82
PTMA-207ENST00000440384 PBRM1Q86U86 1689 aa32.6■■■□□ 2.81
PTMA-207ENST00000440384 SYNJ2O15056 1496 aa32.59■■■□□ 2.81
PTMA-207ENST00000440384 CHD1O14646 1710 aa32.55■■■□□ 2.8
PTMA-207ENST00000440384 KIF27Q86VH2 1401 aa32.51■■■□□ 2.8
PTMA-207ENST00000440384 ERICH3Q5RHP9 1530 aa32.51■■■□□ 2.79
PTMA-207ENST00000440384 TRIM41Q8WV44 630 aa32.49■■■□□ 2.79
PTMA-207ENST00000440384 FHAD1B1AJZ9 1412 aa32.45■■■□□ 2.79
PTMA-207ENST00000440384 ADAMTS12P58397 1594 aa32.39■■■□□ 2.78
PTMA-207ENST00000440384 GRIN2AQ12879 1464 aa32.35■■■□□ 2.77
PTMA-207ENST00000440384 IGF1RP08069 1367 aa32.31■■■□□ 2.76
PTMA-207ENST00000440384 CLASP1Q7Z460 1538 aa32.24■■■□□ 2.75
PTMA-207ENST00000440384 ARHGEF11O15085 1522 aa32.23■■■□□ 2.75
PTMA-207ENST00000440384 CUL7Q14999 1698 aa32.2■■■□□ 2.74
PTMA-207ENST00000440384 RIMBP3CA6NJZ7 1639 aa32.18■■■□□ 2.74
PTMA-207ENST00000440384 RIMBP3BA6NNM3 1639 aa32.18■■■□□ 2.74
PTMA-207ENST00000440384 RIMBP3Q9UFD9 1639 aa32.18■■■□□ 2.74
PTMA-207ENST00000440384 NUP160Q12769 1436 aa32.18■■■□□ 2.74
PTMA-207ENST00000440384 CARMIL1Q5VZK9 1371 aa32.17■■■□□ 2.74
PTMA-207ENST00000440384 CEP170Q5SW79 1584 aa32.11■■■□□ 2.73
PTMA-207ENST00000440384 CYB5RLQ6IPT4 315 aa32.06■■■□□ 2.72
PTMA-207ENST00000440384 RUSC2Q8N2Y8 1516 aa32.03■■■□□ 2.72
PTMA-207ENST00000440384 CHIC1Q5VXU3 224 aa31.97■■■□□ 2.71
PTMA-207ENST00000440384 JPH4Q96JJ6 628 aa31.97■■■□□ 2.71
PTMA-207ENST00000440384 RAPGEF2Q9Y4G8 1499 aa31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms