RNA–Protein interactions for RNA: ENST00000337304.2

ATF4-201, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-201ENST00000337304 NISCHQ9Y2I1 1504 aa58.98■■■■■ 7.03
ATF4-201ENST00000337304 CCDC180Q9P1Z9 1646 aa51.42■■■■■ 5.82
ATF4-201ENST00000337304 ZCCHC6Q5VYS8 1495 aaKnown RBP49.55■■■■■ 5.52
ATF4-201ENST00000337304 DCAF1Q9Y4B6 1507 aa48.75■■■■■ 5.39
ATF4-201ENST00000337304 DCAF8L2P0C7V8 631 aa48.68■■■■■ 5.38
ATF4-201ENST00000337304 ABCC9O60706 1549 aa48.59■■■■■ 5.37
ATF4-201ENST00000337304 SHROOM4Q9ULL8 1493 aa48.16■■■■■ 5.3
ATF4-201ENST00000337304 MYO15BQ96JP2 1530 aa48.15■■■■■ 5.3
ATF4-201ENST00000337304 NACADO15069 1562 aa47.86■■■■■ 5.25
ATF4-201ENST00000337304 RB1CC1Q8TDY2 1594 aa47.44■■■■■ 5.19
ATF4-201ENST00000337304 SCRIBQ14160 1630 aa47.31■■■■■ 5.16
ATF4-201ENST00000337304 UNC13AQ9UPW8 1703 aa46.6■■■■■ 5.05
ATF4-201ENST00000337304 SUPT5HO00267 1087 aaKnown RBP46.33■■■■■ 5.01
ATF4-201ENST00000337304 BICRAQ9NZM4 1560 aa46.07■■■■■ 4.97
ATF4-201ENST00000337304 CECR2Q9BXF3 1484 aa45.85■■■■■ 4.93
ATF4-201ENST00000337304 PABPN1Q86U42 306 aaKnown RBP eCLIP45.83■■■■■ 4.93
ATF4-201ENST00000337304 RSF1Q96T23 1441 aaPredicted RBP45.77■■■■■ 4.92
ATF4-201ENST00000337304 MROH2BQ7Z745 1585 aa45.59■■■■■ 4.89
ATF4-201ENST00000337304 BAZ1AQ9NRL2 1556 aaPredicted RBP45.53■■■■■ 4.88
ATF4-201ENST00000337304 SMARCA4P51532 1647 aa45.35■■■■■ 4.85
ATF4-201ENST00000337304 WIZO95785 1651 aa45.25■■■■■ 4.83
ATF4-201ENST00000337304 PEG3Q9GZU2 1588 aa44.78■■■■■ 4.76
ATF4-201ENST00000337304 TOP2AP11388 1531 aaKnown RBP44.73■■■■■ 4.75
ATF4-201ENST00000337304 EIF4G1Q04637 1599 aaKnown RBP44.65■■■■■ 4.74
ATF4-201ENST00000337304 ATAD2BQ9ULI0 1458 aa44.57■■■■■ 4.73
ATF4-201ENST00000337304 SMARCA2P51531 1590 aa44.54■■■■■ 4.72
ATF4-201ENST00000337304 CHIC1Q5VXU3 224 aa44.38■■■■■ 4.69
ATF4-201ENST00000337304 BAZ1BQ9UIG0 1483 aaKnown RBP44.32■■■■■ 4.69
ATF4-201ENST00000337304 CCDC88BA6NC98 1476 aa44.29■■■■■ 4.68
ATF4-201ENST00000337304 NCAPD3P42695 1498 aa44.17■■■■■ 4.66
ATF4-201ENST00000337304 HMGXB3Q12766 1538 aa44.12■■■■■ 4.65
ATF4-201ENST00000337304 CC2D2AQ9P2K1 1620 aa44■■■■■ 4.63
ATF4-201ENST00000337304 TRIM41Q8WV44 630 aa43.54■■■■■ 4.56
ATF4-201ENST00000337304 ABCC8Q09428 1581 aa43.4■■■■■ 4.54
ATF4-201ENST00000337304 CFTRP13569 1480 aa43.21■■■■■ 4.51
ATF4-201ENST00000337304 WRNQ14191 1432 aaPredicted RBP eCLIP43.07■■■■■ 4.49
ATF4-201ENST00000337304 PRDM2Q13029 1718 aa43.06■■■■■ 4.48
ATF4-201ENST00000337304 CADPSQ9ULU8 1353 aa43.04■■■■■ 4.48
ATF4-201ENST00000337304 SYNJ1O43426 1573 aa42.93■■■■■ 4.46
ATF4-201ENST00000337304 DNAJC5BQ9UF47 199 aa42.9■■■■■ 4.46
ATF4-201ENST00000337304 FAM9AQ8IZU1 332 aaPredicted RBP42.76■■■■■ 4.44
ATF4-201ENST00000337304 TOP2BQ02880 1626 aa42.74■■■■■ 4.43
ATF4-201ENST00000337304 BIVM-ERCC5R4GMW8 1640 aa42.71■■■■■ 4.43
ATF4-201ENST00000337304 LOC105371045A0A1W2PR82 267 aa42.7■■■■■ 4.43
ATF4-201ENST00000337304 NESP48681 1621 aa42.7■■■■■ 4.43
ATF4-201ENST00000337304 LAMC3Q9Y6N6 1575 aa42.68■■■■■ 4.42
ATF4-201ENST00000337304 CUX1P39880 1505 aa42.62■■■■■ 4.41
ATF4-201ENST00000337304 FANCD2Q9BXW9 1451 aa42.58■■■■■ 4.41
ATF4-201ENST00000337304 SOGA1O94964 1423 aa42.57■■■■■ 4.41
ATF4-201ENST00000337304 EEA1Q15075 1411 aa42.44■■■■■ 4.38
ATF4-201ENST00000337304 RUSC2Q8N2Y8 1516 aa42.43■■■■■ 4.38
ATF4-201ENST00000337304 PDS5BQ9NTI5 1447 aa42.31■■■■■ 4.36
ATF4-201ENST00000337304 CEP164Q9UPV0 1460 aa42.3■■■■■ 4.36
ATF4-201ENST00000337304 CSRNP3Q8WYN3 585 aa42.22■■■■■ 4.35
ATF4-201ENST00000337304 KIF21AQ7Z4S6 1674 aa42.21■■■■■ 4.35
ATF4-201ENST00000337304 DNMBPQ6XZF7 1577 aa42.21■■■■■ 4.35
ATF4-201ENST00000337304 EHMT2Q96KQ7 1210 aa42.18■■■■■ 4.34
ATF4-201ENST00000337304 FGD5Q6ZNL6 1462 aa42.14■■■■■ 4.34
ATF4-201ENST00000337304 TOPBP1Q92547 1522 aa42.13■■■■■ 4.34
ATF4-201ENST00000337304 URB2Q14146 1524 aaKnown RBP42.07■■■■■ 4.33
ATF4-201ENST00000337304 KIF27Q86VH2 1401 aa41.96■■■■■ 4.31
ATF4-201ENST00000337304 KIF21BO75037 1637 aa41.94■■■■■ 4.3
ATF4-201ENST00000337304 POLA1P09884 1462 aaPredicted RBP41.93■■■■■ 4.3
ATF4-201ENST00000337304 GOLGA3Q08378 1498 aa41.88■■■■■ 4.29
ATF4-201ENST00000337304 CUX2O14529 1486 aa41.86■■■■■ 4.29
ATF4-201ENST00000337304 RAD54L2Q9Y4B4 1467 aa41.81■■■■■ 4.28
ATF4-201ENST00000337304 MRC2Q9UBG0 1479 aa41.79■■■■■ 4.28
ATF4-201ENST00000337304 ABCA10Q8WWZ4 1543 aa41.76■■■■■ 4.28
ATF4-201ENST00000337304 TNIKQ9UKE5 1360 aa41.76■■■■■ 4.28
ATF4-201ENST00000337304 PRXQ9BXM0 1461 aa41.71■■■■■ 4.27
ATF4-201ENST00000337304 RAPGEF2Q9Y4G8 1499 aa41.7■■■■■ 4.27
ATF4-201ENST00000337304 UBTFP17480 764 aaKnown RBP41.68■■■■■ 4.26
ATF4-201ENST00000337304 WDR97A6NE52 1622 aa41.67■■■■■ 4.26
ATF4-201ENST00000337304 ERICH3Q5RHP9 1530 aa41.63■■■■■ 4.26
ATF4-201ENST00000337304 ERCC6Q03468 1493 aa41.63■■■■■ 4.25
ATF4-201ENST00000337304 IGF1RP08069 1367 aa41.6■■■■■ 4.25
ATF4-201ENST00000337304 WDR62O43379 1518 aa41.59■■■■■ 4.25
ATF4-201ENST00000337304 CEP162Q5TB80 1403 aa41.55■■■■■ 4.24
ATF4-201ENST00000337304 TARBP1Q13395 1621 aaKnown RBP41.53■■■■■ 4.24
ATF4-201ENST00000337304 THOC2Q8NI27 1593 aaKnown RBP41.48■■■■■ 4.23
ATF4-201ENST00000337304 ABCA5Q8WWZ7 1642 aa41.44■■■■■ 4.22
ATF4-201ENST00000337304 CARMIL1Q5VZK9 1371 aa41.39■■■■■ 4.22
ATF4-201ENST00000337304 TDRD9Q8NDG6 1382 aaKnown RBP41.38■■■■■ 4.22
ATF4-201ENST00000337304 GAPVD1Q14C86 1478 aa41.33■■■■■ 4.21
ATF4-201ENST00000337304 CUL7Q14999 1698 aa41.29■■■■■ 4.2
ATF4-201ENST00000337304 IFT140Q96RY7 1462 aa41.28■■■■■ 4.2
ATF4-201ENST00000337304 CLIP1P30622 1438 aa41.21■■■■■ 4.19
ATF4-201ENST00000337304 PBRM1Q86U86 1689 aa41.15■■■■■ 4.18
ATF4-201ENST00000337304 AQRO60306 1485 aaKnown RBP eCLIP41.12■■■■■ 4.173e-11■■■■■ 47.8
ATF4-201ENST00000337304 ZNF608Q9ULD9 1512 aaPredicted RBP41.09■■■■■ 4.17
ATF4-201ENST00000337304 RANGAP1P46060 587 aaPredicted RBP41.02■■■■■ 4.16
ATF4-201ENST00000337304 GRIN2BQ13224 1484 aa40.99■■■■■ 4.15
ATF4-201ENST00000337304 EIF4G3O43432 1585 aaKnown RBP40.96■■■■■ 4.15
ATF4-201ENST00000337304 ADAMTS12P58397 1594 aa40.89■■■■■ 4.14
ATF4-201ENST00000337304 CTTNBP2Q8WZ74 1663 aa40.88■■■■■ 4.13
ATF4-201ENST00000337304 FHAD1B1AJZ9 1412 aa40.87■■■■■ 4.13
ATF4-201ENST00000337304 VPS8Q8N3P4 1428 aa40.85■■■■■ 4.13
ATF4-201ENST00000337304 ARAP1Q96P48 1450 aa40.84■■■■■ 4.13
ATF4-201ENST00000337304 ARHGAP35Q9NRY4 1499 aa40.82■■■■■ 4.13
ATF4-201ENST00000337304 PCGF6Q9BYE7 350 aa40.74■■■■■ 4.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms