RNA–Protein interactions for RNA: ENST00000491134.5

PRDM2-209, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 1,100 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-209ENST00000491134 NISCHQ9Y2I1 1504 aa43.55■■■■■ 4.56
PRDM2-209ENST00000491134 CCDC180Q9P1Z9 1646 aa38.48■■■■□ 3.75
PRDM2-209ENST00000491134 ABCC9O60706 1549 aa37.01■■■■□ 3.52
PRDM2-209ENST00000491134 ZCCHC6Q5VYS8 1495 aaKnown RBP36.41■■■■□ 3.42
PRDM2-209ENST00000491134 DCAF1Q9Y4B6 1507 aa36.1■■■■□ 3.37
PRDM2-209ENST00000491134 MYO15BQ96JP2 1530 aa36.04■■■■□ 3.36
PRDM2-209ENST00000491134 NACADO15069 1562 aa36.01■■■■□ 3.35
PRDM2-209ENST00000491134 DCAF8L2P0C7V8 631 aa35.94■■■■□ 3.34
PRDM2-209ENST00000491134 RB1CC1Q8TDY2 1594 aa35.88■■■■□ 3.33
PRDM2-209ENST00000491134 UNC13AQ9UPW8 1703 aa35.2■■■■□ 3.23
PRDM2-209ENST00000491134 SCRIBQ14160 1630 aa35.1■■■■□ 3.21
PRDM2-209ENST00000491134 BICRAQ9NZM4 1560 aa34.89■■■■□ 3.18
PRDM2-209ENST00000491134 PABPN1Q86U42 306 aaKnown RBP eCLIP34.66■■■■□ 3.14
PRDM2-209ENST00000491134 SHROOM4Q9ULL8 1493 aa34.63■■■■□ 3.13
PRDM2-209ENST00000491134 CECR2Q9BXF3 1484 aa33.87■■■■□ 3.01
PRDM2-209ENST00000491134 EIF4G1Q04637 1599 aaKnown RBP33.85■■■■□ 3.01
PRDM2-209ENST00000491134 BAZ1AQ9NRL2 1556 aaPredicted RBP33.68■■■□□ 2.98
PRDM2-209ENST00000491134 SMARCA4P51532 1647 aa33.67■■■□□ 2.98
PRDM2-209ENST00000491134 MROH2BQ7Z745 1585 aa33.59■■■□□ 2.97
PRDM2-209ENST00000491134 CC2D2AQ9P2K1 1620 aa33.56■■■□□ 2.96
PRDM2-209ENST00000491134 DNAJC5BQ9UF47 199 aa33.53■■■□□ 2.96
PRDM2-209ENST00000491134 RSF1Q96T23 1441 aaPredicted RBP33.4■■■□□ 2.94
PRDM2-209ENST00000491134 PEG3Q9GZU2 1588 aa33.38■■■□□ 2.93
PRDM2-209ENST00000491134 ATAD2BQ9ULI0 1458 aa33.33■■■□□ 2.93
PRDM2-209ENST00000491134 SMARCA2P51531 1590 aa33.29■■■□□ 2.92
PRDM2-209ENST00000491134 WIZO95785 1651 aa33.24■■■□□ 2.91
PRDM2-209ENST00000491134 NCAPD3P42695 1498 aa33.24■■■□□ 2.91
PRDM2-209ENST00000491134 HMGXB3Q12766 1538 aa33.12■■■□□ 2.89
PRDM2-209ENST00000491134 BAZ1BQ9UIG0 1483 aaKnown RBP33.04■■■□□ 2.88
PRDM2-209ENST00000491134 TOP2AP11388 1531 aaKnown RBP32.91■■■□□ 2.86
PRDM2-209ENST00000491134 SUPT5HO00267 1087 aaKnown RBP32.84■■■□□ 2.85
PRDM2-209ENST00000491134 CCDC88BA6NC98 1476 aa32.53■■■□□ 2.8
PRDM2-209ENST00000491134 CADPSQ9ULU8 1353 aa32.26■■■□□ 2.75
PRDM2-209ENST00000491134 NESP48681 1621 aa32.25■■■□□ 2.75
PRDM2-209ENST00000491134 LAMC3Q9Y6N6 1575 aa32.24■■■□□ 2.75
PRDM2-209ENST00000491134 CFTRP13569 1480 aa32.23■■■□□ 2.75
PRDM2-209ENST00000491134 PRDM2Q13029 1718 aa32.07■■■□□ 2.72
PRDM2-209ENST00000491134 PDS5BQ9NTI5 1447 aa31.95■■■□□ 2.71
PRDM2-209ENST00000491134 KIF21AQ7Z4S6 1674 aa31.91■■■□□ 2.7
PRDM2-209ENST00000491134 FANCD2Q9BXW9 1451 aa31.88■■■□□ 2.69
PRDM2-209ENST00000491134 ERCC6Q03468 1493 aa31.78■■■□□ 2.68
PRDM2-209ENST00000491134 CEP164Q9UPV0 1460 aa31.77■■■□□ 2.68
PRDM2-209ENST00000491134 THOC2Q8NI27 1593 aaKnown RBP31.67■■■□□ 2.66
PRDM2-209ENST00000491134 MRC2Q9UBG0 1479 aa31.62■■■□□ 2.65
PRDM2-209ENST00000491134 URB2Q14146 1524 aaKnown RBP31.58■■■□□ 2.65
PRDM2-209ENST00000491134 WDR62O43379 1518 aa31.54■■■□□ 2.64
PRDM2-209ENST00000491134 ABCC8Q09428 1581 aa31.5■■■□□ 2.63
PRDM2-209ENST00000491134 DNMBPQ6XZF7 1577 aa31.47■■■□□ 2.63
PRDM2-209ENST00000491134 CUX1P39880 1505 aa31.47■■■□□ 2.63
PRDM2-209ENST00000491134 TOPBP1Q92547 1522 aa31.47■■■□□ 2.63
PRDM2-209ENST00000491134 WRNQ14191 1432 aaPredicted RBP eCLIP31.41■■■□□ 2.629e-6■■■■■ 50.1
PRDM2-209ENST00000491134 SYNJ1O43426 1573 aa31.37■■■□□ 2.61
PRDM2-209ENST00000491134 BIVM-ERCC5R4GMW8 1640 aa31.36■■■□□ 2.61
PRDM2-209ENST00000491134 TOP2BQ02880 1626 aa31.35■■■□□ 2.61
PRDM2-209ENST00000491134 CUX2O14529 1486 aa31.33■■■□□ 2.61
PRDM2-209ENST00000491134 POLA1P09884 1462 aaPredicted RBP31.24■■■□□ 2.59
PRDM2-209ENST00000491134 FGD5Q6ZNL6 1462 aa31.23■■■□□ 2.59
PRDM2-209ENST00000491134 TARBP1Q13395 1621 aaKnown RBP31.13■■■□□ 2.57
PRDM2-209ENST00000491134 IFT140Q96RY7 1462 aa31.09■■■□□ 2.57
PRDM2-209ENST00000491134 CHIC1Q5VXU3 224 aa31.09■■■□□ 2.57
PRDM2-209ENST00000491134 RAD54L2Q9Y4B4 1467 aa31.08■■■□□ 2.57
PRDM2-209ENST00000491134 SOGA1O94964 1423 aa31.07■■■□□ 2.57
PRDM2-209ENST00000491134 WDR97A6NE52 1622 aa31.02■■■□□ 2.56
PRDM2-209ENST00000491134 TRIM41Q8WV44 630 aa30.99■■■□□ 2.55
PRDM2-209ENST00000491134 ABCA10Q8WWZ4 1543 aa30.98■■■□□ 2.55
PRDM2-209ENST00000491134 ZNF608Q9ULD9 1512 aaPredicted RBP30.94■■■□□ 2.54
PRDM2-209ENST00000491134 EIF4G3O43432 1585 aaKnown RBP30.84■■■□□ 2.53
PRDM2-209ENST00000491134 ABCA5Q8WWZ7 1642 aa30.84■■■□□ 2.53
PRDM2-209ENST00000491134 TDRD9Q8NDG6 1382 aaKnown RBP30.83■■■□□ 2.53
PRDM2-209ENST00000491134 AQRO60306 1485 aaKnown RBP eCLIP30.81■■■□□ 2.52
PRDM2-209ENST00000491134 GAPVD1Q14C86 1478 aa30.74■■■□□ 2.51
PRDM2-209ENST00000491134 KIF27Q86VH2 1401 aa30.69■■■□□ 2.5
PRDM2-209ENST00000491134 PBRM1Q86U86 1689 aa30.68■■■□□ 2.5
PRDM2-209ENST00000491134 RUSC2Q8N2Y8 1516 aa30.68■■■□□ 2.5
PRDM2-209ENST00000491134 GRIN2BQ13224 1484 aa30.65■■■□□ 2.5
PRDM2-209ENST00000491134 ERICH3Q5RHP9 1530 aa30.61■■■□□ 2.49
PRDM2-209ENST00000491134 IGF1RP08069 1367 aa30.56■■■□□ 2.48
PRDM2-209ENST00000491134 SNAPC4Q5SXM2 1469 aa30.53■■■□□ 2.48
PRDM2-209ENST00000491134 MAGI1Q96QZ7 1491 aaPredicted RBP30.52■■■□□ 2.48
PRDM2-209ENST00000491134 EEA1Q15075 1411 aa30.5■■■□□ 2.47
PRDM2-209ENST00000491134 ADAMTS12P58397 1594 aa30.47■■■□□ 2.47
PRDM2-209ENST00000491134 CUL7Q14999 1698 aa30.43■■■□□ 2.46
PRDM2-209ENST00000491134 FHAD1B1AJZ9 1412 aa30.4■■■□□ 2.46
PRDM2-209ENST00000491134 SYNJ2O15056 1496 aa30.4■■■□□ 2.46
PRDM2-209ENST00000491134 CSRNP3Q8WYN3 585 aa30.36■■■□□ 2.45
PRDM2-209ENST00000491134 CHD1O14646 1710 aa30.36■■■□□ 2.45
PRDM2-209ENST00000491134 CARMIL1Q5VZK9 1371 aa30.35■■■□□ 2.45
PRDM2-209ENST00000491134 PRXQ9BXM0 1461 aa30.34■■■□□ 2.45
PRDM2-209ENST00000491134 FAM9AQ8IZU1 332 aaPredicted RBP30.31■■■□□ 2.44
PRDM2-209ENST00000491134 GRIN2AQ12879 1464 aa30.28■■■□□ 2.44
PRDM2-209ENST00000491134 CHMP7Q8WUX9 453 aaPredicted RBP30.24■■■□□ 2.43
PRDM2-209ENST00000491134 RAPGEF2Q9Y4G8 1499 aa30.24■■■□□ 2.43
PRDM2-209ENST00000491134 FBLN2P98095 1184 aa30.2■■■□□ 2.43
PRDM2-209ENST00000491134 KIF21BO75037 1637 aa30.2■■■□□ 2.43
PRDM2-209ENST00000491134 NUP160Q12769 1436 aa30.15■■■□□ 2.42
PRDM2-209ENST00000491134 CEP170Q5SW79 1584 aa30.14■■■□□ 2.42
PRDM2-209ENST00000491134 OSCARQ8IYS5 282 aa30.08■■■□□ 2.41
PRDM2-209ENST00000491134 CLASP1Q7Z460 1538 aa30.06■■■□□ 2.4
PRDM2-209ENST00000491134 GOLGA3Q08378 1498 aa30■■■□□ 2.39
PRDM2-209ENST00000491134 KIAA0586Q9BVV6 1533 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms