RNA–Protein interactions for RNA: ENST00000416568.5

PFKFB4-204, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, humanhuman

TSL 1 (best) BASIC

Gene PFKFB4, Length 1,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB4-204ENST00000416568 NISCHQ9Y2I1 1504 aa54.52■■■■■ 6.32
PFKFB4-204ENST00000416568 CCDC180Q9P1Z9 1646 aa48.02■■■■■ 5.28
PFKFB4-204ENST00000416568 ABCC9O60706 1549 aa46.46■■■■■ 5.03
PFKFB4-204ENST00000416568 ZCCHC6Q5VYS8 1495 aaKnown RBP45.55■■■■■ 4.88
PFKFB4-204ENST00000416568 DCAF8L2P0C7V8 631 aa45.47■■■■■ 4.87
PFKFB4-204ENST00000416568 DCAF1Q9Y4B6 1507 aa45.08■■■■■ 4.81
PFKFB4-204ENST00000416568 NACADO15069 1562 aa45.05■■■■■ 4.8
PFKFB4-204ENST00000416568 MYO15BQ96JP2 1530 aa44.98■■■■■ 4.79
PFKFB4-204ENST00000416568 RB1CC1Q8TDY2 1594 aa44.92■■■■■ 4.78
PFKFB4-204ENST00000416568 SCRIBQ14160 1630 aa44.01■■■■■ 4.64
PFKFB4-204ENST00000416568 UNC13AQ9UPW8 1703 aa43.8■■■■■ 4.6
PFKFB4-204ENST00000416568 SHROOM4Q9ULL8 1493 aa43.7■■■■■ 4.59
PFKFB4-204ENST00000416568 PABPN1Q86U42 306 aaKnown RBP eCLIP43.63■■■■■ 4.57
PFKFB4-204ENST00000416568 BICRAQ9NZM4 1560 aa43.51■■■■■ 4.56
PFKFB4-204ENST00000416568 CECR2Q9BXF3 1484 aa42.43■■■■■ 4.38
PFKFB4-204ENST00000416568 EIF4G1Q04637 1599 aaKnown RBP42.33■■■■■ 4.37
PFKFB4-204ENST00000416568 BAZ1AQ9NRL2 1556 aaPredicted RBP42.19■■■■■ 4.34
PFKFB4-204ENST00000416568 SMARCA4P51532 1647 aa42.11■■■■■ 4.33
PFKFB4-204ENST00000416568 MROH2BQ7Z745 1585 aa42.05■■■■■ 4.32
PFKFB4-204ENST00000416568 DNAJC5BQ9UF47 199 aa42■■■■■ 4.31
PFKFB4-204ENST00000416568 CC2D2AQ9P2K1 1620 aa41.98■■■■■ 4.31
PFKFB4-204ENST00000416568 RSF1Q96T23 1441 aaPredicted RBP41.87■■■■■ 4.29
PFKFB4-204ENST00000416568 ATAD2BQ9ULI0 1458 aa41.75■■■■■ 4.27
PFKFB4-204ENST00000416568 SMARCA2P51531 1590 aa41.7■■■■■ 4.27
PFKFB4-204ENST00000416568 PEG3Q9GZU2 1588 aa41.65■■■■■ 4.26
PFKFB4-204ENST00000416568 WIZO95785 1651 aa41.61■■■■■ 4.25
PFKFB4-204ENST00000416568 NCAPD3P42695 1498 aa41.59■■■■■ 4.25
PFKFB4-204ENST00000416568 SUPT5HO00267 1087 aaKnown RBP41.53■■■■■ 4.24
PFKFB4-204ENST00000416568 BAZ1BQ9UIG0 1483 aaKnown RBP41.46■■■■■ 4.23
PFKFB4-204ENST00000416568 HMGXB3Q12766 1538 aa41.41■■■■■ 4.22
PFKFB4-204ENST00000416568 TOP2AP11388 1531 aaKnown RBP41.2■■■■■ 4.19
PFKFB4-204ENST00000416568 CCDC88BA6NC98 1476 aa40.77■■■■■ 4.12
PFKFB4-204ENST00000416568 CADPSQ9ULU8 1353 aa40.47■■■■■ 4.07
PFKFB4-204ENST00000416568 NESP48681 1621 aa40.41■■■■■ 4.06
PFKFB4-204ENST00000416568 CFTRP13569 1480 aa40.35■■■■■ 4.05
PFKFB4-204ENST00000416568 LAMC3Q9Y6N6 1575 aa40.34■■■■■ 4.05
PFKFB4-204ENST00000416568 PDS5BQ9NTI5 1447 aa40.12■■■■■ 4.01
PFKFB4-204ENST00000416568 ERCC6Q03468 1493 aa40■■■■□ 3.99
PFKFB4-204ENST00000416568 FANCD2Q9BXW9 1451 aa39.99■■■■□ 3.99
PFKFB4-204ENST00000416568 PRDM2Q13029 1718 aa39.94■■■■□ 3.98
PFKFB4-204ENST00000416568 CEP164Q9UPV0 1460 aa39.86■■■■□ 3.97
PFKFB4-204ENST00000416568 KIF21AQ7Z4S6 1674 aa39.84■■■■□ 3.97
PFKFB4-204ENST00000416568 MRC2Q9UBG0 1479 aa39.63■■■■□ 3.94
PFKFB4-204ENST00000416568 THOC2Q8NI27 1593 aaKnown RBP39.53■■■■□ 3.92
PFKFB4-204ENST00000416568 URB2Q14146 1524 aaKnown RBP39.53■■■■□ 3.92
PFKFB4-204ENST00000416568 ABCC8Q09428 1581 aa39.52■■■■□ 3.92
PFKFB4-204ENST00000416568 WRNQ14191 1432 aaPredicted RBP eCLIP39.47■■■■□ 3.91
PFKFB4-204ENST00000416568 WDR62O43379 1518 aa39.44■■■■□ 3.9
PFKFB4-204ENST00000416568 TOPBP1Q92547 1522 aa39.42■■■■□ 3.9
PFKFB4-204ENST00000416568 DNMBPQ6XZF7 1577 aa39.4■■■■□ 3.9
PFKFB4-204ENST00000416568 CUX1P39880 1505 aa39.4■■■■□ 3.9
PFKFB4-204ENST00000416568 SYNJ1O43426 1573 aa39.27■■■■□ 3.88
PFKFB4-204ENST00000416568 TOP2BQ02880 1626 aa39.22■■■■□ 3.87
PFKFB4-204ENST00000416568 CUX2O14529 1486 aa39.21■■■■□ 3.87
PFKFB4-204ENST00000416568 BIVM-ERCC5R4GMW8 1640 aa39.17■■■■□ 3.86
PFKFB4-204ENST00000416568 FGD5Q6ZNL6 1462 aa39.17■■■■□ 3.86
PFKFB4-204ENST00000416568 TRIM41Q8WV44 630 aa39.16■■■■□ 3.86
PFKFB4-204ENST00000416568 CHIC1Q5VXU3 224 aa39.14■■■■□ 3.86
PFKFB4-204ENST00000416568 POLA1P09884 1462 aaPredicted RBP39.14■■■■□ 3.86
PFKFB4-204ENST00000416568 SOGA1O94964 1423 aa39.05■■■■□ 3.84
PFKFB4-204ENST00000416568 RAD54L2Q9Y4B4 1467 aa39■■■■□ 3.83
PFKFB4-204ENST00000416568 IFT140Q96RY7 1462 aa38.99■■■■□ 3.83
PFKFB4-204ENST00000416568 TARBP1Q13395 1621 aaKnown RBP38.87■■■■□ 3.81
PFKFB4-204ENST00000416568 ABCA10Q8WWZ4 1543 aa38.8■■■■□ 3.8
PFKFB4-204ENST00000416568 ZNF608Q9ULD9 1512 aaPredicted RBP38.77■■■■□ 3.8
PFKFB4-204ENST00000416568 TDRD9Q8NDG6 1382 aaKnown RBP38.76■■■■□ 3.8
PFKFB4-204ENST00000416568 AQRO60306 1485 aaKnown RBP eCLIP38.68■■■■□ 3.784e-7■■■■■ 27.5
PFKFB4-204ENST00000416568 WDR97A6NE52 1622 aa38.68■■■■□ 3.78
PFKFB4-204ENST00000416568 KIF27Q86VH2 1401 aa38.59■■■■□ 3.77
PFKFB4-204ENST00000416568 EIF4G3O43432 1585 aaKnown RBP38.59■■■■□ 3.77
PFKFB4-204ENST00000416568 GAPVD1Q14C86 1478 aa38.58■■■■□ 3.77
PFKFB4-204ENST00000416568 ABCA5Q8WWZ7 1642 aa38.52■■■■□ 3.76
PFKFB4-204ENST00000416568 RUSC2Q8N2Y8 1516 aa38.48■■■■□ 3.75
PFKFB4-204ENST00000416568 GRIN2BQ13224 1484 aa38.46■■■■□ 3.75
PFKFB4-204ENST00000416568 FAM9AQ8IZU1 332 aaPredicted RBP38.38■■■■□ 3.73
PFKFB4-204ENST00000416568 IGF1RP08069 1367 aa38.35■■■■□ 3.73
PFKFB4-204ENST00000416568 PBRM1Q86U86 1689 aa38.33■■■■□ 3.73
PFKFB4-204ENST00000416568 ERICH3Q5RHP9 1530 aa38.33■■■■□ 3.73
PFKFB4-204ENST00000416568 EEA1Q15075 1411 aa38.32■■■■□ 3.73
PFKFB4-204ENST00000416568 SNAPC4Q5SXM2 1469 aa38.31■■■■□ 3.72
PFKFB4-204ENST00000416568 CSRNP3Q8WYN3 585 aa38.25■■■■□ 3.71
PFKFB4-204ENST00000416568 MAGI1Q96QZ7 1491 aaPredicted RBP38.25■■■■□ 3.71
PFKFB4-204ENST00000416568 FBLN2P98095 1184 aa38.17■■■■□ 3.7
PFKFB4-204ENST00000416568 FHAD1B1AJZ9 1412 aa38.16■■■■□ 3.7
PFKFB4-204ENST00000416568 CARMIL1Q5VZK9 1371 aa38.15■■■■□ 3.7
PFKFB4-204ENST00000416568 CHMP7Q8WUX9 453 aaPredicted RBP38.14■■■■□ 3.7
PFKFB4-204ENST00000416568 ADAMTS12P58397 1594 aa38.12■■■■□ 3.69
PFKFB4-204ENST00000416568 SYNJ2O15056 1496 aa38.11■■■■□ 3.69
PFKFB4-204ENST00000416568 CUL7Q14999 1698 aa38.09■■■■□ 3.69
PFKFB4-204ENST00000416568 PRXQ9BXM0 1461 aa38■■■■□ 3.67
PFKFB4-204ENST00000416568 RAPGEF2Q9Y4G8 1499 aa37.98■■■■□ 3.67
PFKFB4-204ENST00000416568 GRIN2AQ12879 1464 aa37.95■■■■□ 3.67
PFKFB4-204ENST00000416568 CHD1O14646 1710 aa37.92■■■■□ 3.66
PFKFB4-204ENST00000416568 EHMT2Q96KQ7 1210 aa37.87■■■■□ 3.65
PFKFB4-204ENST00000416568 OSCARQ8IYS5 282 aa37.85■■■■□ 3.65
PFKFB4-204ENST00000416568 KIF21BO75037 1637 aa37.81■■■■□ 3.64
PFKFB4-204ENST00000416568 NUP160Q12769 1436 aa37.74■■■■□ 3.63
PFKFB4-204ENST00000416568 GOLGA3Q08378 1498 aa37.72■■■■□ 3.63
PFKFB4-204ENST00000416568 CEP170Q5SW79 1584 aa37.71■■■■□ 3.63
PFKFB4-204ENST00000416568 UBTFP17480 764 aaKnown RBP37.68■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms