RNA–Protein interactions for RNA: ENST00000491815.1

PRDM2-210, Transcript of PR/SET domain 2, humanhuman

TSL 2

Gene PRDM2, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-210ENST00000491815 AEBP2Q6ZN18 517 aaPredicted RBP30.4■■■□□ 2.46
PRDM2-210ENST00000491815 CHIC1Q5VXU3 224 aa30.25■■■□□ 2.43
PRDM2-210ENST00000491815 NISCHQ9Y2I1 1504 aa28.53■■■□□ 2.16
PRDM2-210ENST00000491815 PHF23Q9BUL5 403 aaPredicted RBP26.65■■□□□ 1.86
PRDM2-210ENST00000491815 SENP3Q9H4L4 574 aaPredicted RBP25.73■■□□□ 1.71
PRDM2-210ENST00000491815 CCDC180Q9P1Z9 1646 aa25.52■■□□□ 1.68
PRDM2-210ENST00000491815 ABCC9O60706 1549 aa24.89■■□□□ 1.57
PRDM2-210ENST00000491815 PLPPR3Q6T4P5 718 aa24.81■■□□□ 1.56
PRDM2-210ENST00000491815 RB1CC1Q8TDY2 1594 aa24■■□□□ 1.43
PRDM2-210ENST00000491815 NACADO15069 1562 aa23.96■■□□□ 1.43
PRDM2-210ENST00000491815 MYO15BQ96JP2 1530 aa23.84■■□□□ 1.41
PRDM2-210ENST00000491815 FOXD1Q16676 465 aa23.79■■□□□ 1.4
PRDM2-210ENST00000491815 ZCCHC6Q5VYS8 1495 aaKnown RBP23.77■■□□□ 1.4
PRDM2-210ENST00000491815 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
PRDM2-210ENST00000491815 DCAF8L2P0C7V8 631 aa23.64■■□□□ 1.37
PRDM2-210ENST00000491815 UNC13AQ9UPW8 1703 aa23.52■■□□□ 1.36
PRDM2-210ENST00000491815 PPP6R1Q9UPN7 881 aa23.32■■□□□ 1.32
PRDM2-210ENST00000491815 ADRA2BP18089 450 aa23.31■■□□□ 1.32
PRDM2-210ENST00000491815 BICRAQ9NZM4 1560 aa23.29■■□□□ 1.32
PRDM2-210ENST00000491815 PABPN1Q86U42 306 aaKnown RBP eCLIP23.16■■□□□ 1.3
PRDM2-210ENST00000491815 SCRIBQ14160 1630 aa23.13■■□□□ 1.29
PRDM2-210ENST00000491815 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
PRDM2-210ENST00000491815 DNAJC5BQ9UF47 199 aa22.92■■□□□ 1.26
PRDM2-210ENST00000491815 EIF4G1Q04637 1599 aaKnown RBP22.66■■□□□ 1.22
PRDM2-210ENST00000491815 CC2D2AQ9P2K1 1620 aa22.59■■□□□ 1.21
PRDM2-210ENST00000491815 PIAS4Q8N2W9 510 aaPredicted RBP22.55■■□□□ 1.2
PRDM2-210ENST00000491815 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
PRDM2-210ENST00000491815 SMARCA4P51532 1647 aa22.18■■□□□ 1.14
PRDM2-210ENST00000491815 BAZ1AQ9NRL2 1556 aaPredicted RBP22.14■■□□□ 1.13
PRDM2-210ENST00000491815 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
PRDM2-210ENST00000491815 ATAD2BQ9ULI0 1458 aa22.06■■□□□ 1.12
PRDM2-210ENST00000491815 SMARCA2P51531 1590 aa22.06■■□□□ 1.12
PRDM2-210ENST00000491815 PEG3Q9GZU2 1588 aa22.04■■□□□ 1.12
PRDM2-210ENST00000491815 KCNA4P22459 653 aa22.02■■□□□ 1.12
PRDM2-210ENST00000491815 HMGXB3Q12766 1538 aa22.01■■□□□ 1.11
PRDM2-210ENST00000491815 MROH2BQ7Z745 1585 aa21.95■■□□□ 1.11
PRDM2-210ENST00000491815 PPP4R3CPQ6ZMV5 832 aa21.92■■□□□ 1.1
PRDM2-210ENST00000491815 BAZ1BQ9UIG0 1483 aaKnown RBP21.85■■□□□ 1.09
PRDM2-210ENST00000491815 MSH5O43196 834 aa21.75■■□□□ 1.07
PRDM2-210ENST00000491815 WIZO95785 1651 aa21.73■■□□□ 1.07
PRDM2-210ENST00000491815 RSF1Q96T23 1441 aaPredicted RBP21.65■■□□□ 1.06
PRDM2-210ENST00000491815 LAMC3Q9Y6N6 1575 aa21.55■■□□□ 1.04
PRDM2-210ENST00000491815 TOP2AP11388 1531 aaKnown RBP21.53■■□□□ 1.04
PRDM2-210ENST00000491815 NESP48681 1621 aa21.52■■□□□ 1.04
PRDM2-210ENST00000491815 NCBP3Q53F19 620 aaKnown RBP21.52■■□□□ 1.04
PRDM2-210ENST00000491815 ERCC6Q03468 1493 aa21.46■■□□□ 1.03
PRDM2-210ENST00000491815 DNAJC5Q9H3Z4 198 aa21.46■■□□□ 1.03
PRDM2-210ENST00000491815 CADPSQ9ULU8 1353 aa21.39■■□□□ 1.02
PRDM2-210ENST00000491815 SCAF1Q9H7N4 1312 aaKnown RBP21.38■■□□□ 1.01
PRDM2-210ENST00000491815 CUX2O14529 1486 aa21.38■■□□□ 1.01
PRDM2-210ENST00000491815 KIF21AQ7Z4S6 1674 aa21.34■■□□□ 1.01
PRDM2-210ENST00000491815 PDS5BQ9NTI5 1447 aa21.34■■□□□ 1.01
PRDM2-210ENST00000491815 THOC2Q8NI27 1593 aaKnown RBP21.32■■□□□ 1
PRDM2-210ENST00000491815 CFTRP13569 1480 aa21.28■■□□□ 1
PRDM2-210ENST00000491815 PRDM2Q13029 1718 aa21.23■□□□□ 0.99
PRDM2-210ENST00000491815 CCDC88BA6NC98 1476 aa21.21■□□□□ 0.99
PRDM2-210ENST00000491815 CNKSR2Q8WXI2 1034 aa21.2■□□□□ 0.98
PRDM2-210ENST00000491815 NPM3O75607 178 aaKnown RBP21.19■□□□□ 0.98
PRDM2-210ENST00000491815 FANCD2Q9BXW9 1451 aa21.15■□□□□ 0.98
PRDM2-210ENST00000491815 MRC2Q9UBG0 1479 aa21.14■□□□□ 0.98
PRDM2-210ENST00000491815 CEP164Q9UPV0 1460 aa21.14■□□□□ 0.98
PRDM2-210ENST00000491815 WDR62O43379 1518 aa21.13■□□□□ 0.97
PRDM2-210ENST00000491815 SLC4A1APQ9BWU0 796 aaKnown RBP21.07■□□□□ 0.96
PRDM2-210ENST00000491815 EHMT2Q96KQ7 1210 aa21.06■□□□□ 0.96
PRDM2-210ENST00000491815 MAPK8IP2Q13387 824 aaPredicted RBP20.99■□□□□ 0.95
PRDM2-210ENST00000491815 URB2Q14146 1524 aaKnown RBP20.96■□□□□ 0.95
PRDM2-210ENST00000491815 SUPT5HO00267 1087 aaKnown RBP20.86■□□□□ 0.93
PRDM2-210ENST00000491815 ABCC8Q09428 1581 aa20.84■□□□□ 0.93
PRDM2-210ENST00000491815 TOPBP1Q92547 1522 aa20.82■□□□□ 0.92
PRDM2-210ENST00000491815 DNMBPQ6XZF7 1577 aa20.81■□□□□ 0.92
PRDM2-210ENST00000491815 IFT140Q96RY7 1462 aa20.72■□□□□ 0.91
PRDM2-210ENST00000491815 RNF216Q9NWF9 866 aaPredicted RBP20.66■□□□□ 0.9
PRDM2-210ENST00000491815 TARBP1Q13395 1621 aaKnown RBP20.64■□□□□ 0.9
PRDM2-210ENST00000491815 POLA1P09884 1462 aaPredicted RBP20.63■□□□□ 0.89
PRDM2-210ENST00000491815 DMRT2Q9Y5R5 561 aa20.63■□□□□ 0.89
PRDM2-210ENST00000491815 CSRNP3Q8WYN3 585 aa20.62■□□□□ 0.89
PRDM2-210ENST00000491815 CUX1P39880 1505 aa20.62■□□□□ 0.89
PRDM2-210ENST00000491815 ZNF608Q9ULD9 1512 aaPredicted RBP20.59■□□□□ 0.89
PRDM2-210ENST00000491815 EIF4G3O43432 1585 aaKnown RBP20.57■□□□□ 0.88
PRDM2-210ENST00000491815 FGD5Q6ZNL6 1462 aa20.55■□□□□ 0.88
PRDM2-210ENST00000491815 WDR97A6NE52 1622 aa20.54■□□□□ 0.88
PRDM2-210ENST00000491815 SOGA1O94964 1423 aa20.5■□□□□ 0.87
PRDM2-210ENST00000491815 RAD54L2Q9Y4B4 1467 aa20.5■□□□□ 0.87
PRDM2-210ENST00000491815 BIVM-ERCC5R4GMW8 1640 aa20.47■□□□□ 0.87
PRDM2-210ENST00000491815 TOP2BQ02880 1626 aa20.45■□□□□ 0.86
PRDM2-210ENST00000491815 HOXD11P31277 338 aaPredicted RBP20.44■□□□□ 0.86
PRDM2-210ENST00000491815 AQRO60306 1485 aaKnown RBP eCLIP20.43■□□□□ 0.86
PRDM2-210ENST00000491815 WRNQ14191 1432 aaPredicted RBP eCLIP20.42■□□□□ 0.86
PRDM2-210ENST00000491815 SYNJ1O43426 1573 aa20.4■□□□□ 0.86
PRDM2-210ENST00000491815 ABCA10Q8WWZ4 1543 aa20.39■□□□□ 0.85
PRDM2-210ENST00000491815 TDRD9Q8NDG6 1382 aaKnown RBP20.36■□□□□ 0.85
PRDM2-210ENST00000491815 OSCARQ8IYS5 282 aa20.35■□□□□ 0.85
PRDM2-210ENST00000491815 CHD1O14646 1710 aa20.35■□□□□ 0.85
PRDM2-210ENST00000491815 ABCA5Q8WWZ7 1642 aa20.35■□□□□ 0.85
PRDM2-210ENST00000491815 PBRM1Q86U86 1689 aa20.32■□□□□ 0.84
PRDM2-210ENST00000491815 GRIN2BQ13224 1484 aa20.31■□□□□ 0.84
PRDM2-210ENST00000491815 MAGI1Q96QZ7 1491 aaPredicted RBP20.3■□□□□ 0.84
PRDM2-210ENST00000491815 GAPVD1Q14C86 1478 aa20.28■□□□□ 0.84
PRDM2-210ENST00000491815 SNAPC4Q5SXM2 1469 aa20.28■□□□□ 0.84
PRDM2-210ENST00000491815 ZBTB22O15209 634 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms