RNA–Protein interactions for RNA: ENST00000378888.9

DVL1-201, Transcript of dishevelled segment polarity protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DVL1, Length 3,239 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DVL1-201ENST00000378888 NISCHQ9Y2I1 1504 aa46.01■■■■■ 4.96
DVL1-201ENST00000378888 SHROOM4Q9ULL8 1493 aa41.65■■■■■ 4.26
DVL1-201ENST00000378888 SUPT5HO00267 1087 aaKnown RBP41.06■■■■■ 4.16
DVL1-201ENST00000378888 DCAF8L2P0C7V8 631 aa40.63■■■■■ 4.09
DVL1-201ENST00000378888 PCGF6Q9BYE7 350 aa39.18■■■■□ 3.86
DVL1-201ENST00000378888 CHIC1Q5VXU3 224 aa39.15■■■■□ 3.86
DVL1-201ENST00000378888 MYO15BQ96JP2 1530 aa39.04■■■■□ 3.84
DVL1-201ENST00000378888 LOC105371045A0A1W2PR82 267 aa38.83■■■■□ 3.81
DVL1-201ENST00000378888 PPARGC1BQ86YN6 1023 aaKnown RBP38.81■■■■□ 3.8
DVL1-201ENST00000378888 ZCCHC6Q5VYS8 1495 aaKnown RBP38.79■■■■□ 3.8
DVL1-201ENST00000378888 EHMT2Q96KQ7 1210 aa38.76■■■■□ 3.8
DVL1-201ENST00000378888 HRCP23327 699 aa38.59■■■■□ 3.77
DVL1-201ENST00000378888 FAM9AQ8IZU1 332 aaPredicted RBP38.29■■■■□ 3.72
DVL1-201ENST00000378888 CCDC180Q9P1Z9 1646 aa37.99■■■■□ 3.67
DVL1-201ENST00000378888 TRIM41Q8WV44 630 aa37.61■■■■□ 3.61
DVL1-201ENST00000378888 TTBK1Q5TCY1 1321 aaPredicted RBP37.43■■■■□ 3.58
DVL1-201ENST00000378888 TRIM26Q12899 539 aaPredicted RBP37.43■■■■□ 3.58
DVL1-201ENST00000378888 SCRIBQ14160 1630 aa37.23■■■■□ 3.55
DVL1-201ENST00000378888 DCAF1Q9Y4B6 1507 aa37.13■■■■□ 3.53
DVL1-201ENST00000378888 RSF1Q96T23 1441 aaPredicted RBP36.95■■■■□ 3.51
DVL1-201ENST00000378888 ABCC9O60706 1549 aa36.89■■■■□ 3.5
DVL1-201ENST00000378888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.75■■■■□ 3.47
DVL1-201ENST00000378888 RB1CC1Q8TDY2 1594 aa36.73■■■■□ 3.47
DVL1-201ENST00000378888 CECR2Q9BXF3 1484 aa36.6■■■■□ 3.45
DVL1-201ENST00000378888 CCER1Q8TC90 406 aaPredicted RBP36.49■■■■□ 3.43
DVL1-201ENST00000378888 ZEB1P37275 1124 aaPredicted RBP36.38■■■■□ 3.41
DVL1-201ENST00000378888 RANGAP1P46060 587 aaPredicted RBP36.32■■■■□ 3.4
DVL1-201ENST00000378888 SCAF1Q9H7N4 1312 aaKnown RBP36.22■■■■□ 3.39
DVL1-201ENST00000378888 MROH2BQ7Z745 1585 aa36.22■■■■□ 3.39
DVL1-201ENST00000378888 UBTFP17480 764 aaKnown RBP36.08■■■■□ 3.37
DVL1-201ENST00000378888 WIZO95785 1651 aa36.04■■■■□ 3.36
DVL1-201ENST00000378888 PABPN1Q86U42 306 aaKnown RBP eCLIP36.02■■■■□ 3.362e-7■■■□□ 15
DVL1-201ENST00000378888 YTHDC1Q96MU7 727 aaKnown RBP35.87■■■■□ 3.33
DVL1-201ENST00000378888 ABCC8Q09428 1581 aa35.8■■■■□ 3.32
DVL1-201ENST00000378888 PELP1Q8IZL8 1130 aaKnown RBP35.79■■■■□ 3.32
DVL1-201ENST00000378888 HNRNPUL2Q1KMD3 747 aaKnown RBP35.78■■■■□ 3.32
DVL1-201ENST00000378888 NEUROD1Q13562 356 aa35.76■■■■□ 3.31
DVL1-201ENST00000378888 DIEXFQ68CQ4 756 aaKnown RBP35.73■■■■□ 3.31
DVL1-201ENST00000378888 CCDC88BA6NC98 1476 aa35.66■■■■□ 3.3
DVL1-201ENST00000378888 SOGA1O94964 1423 aa35.64■■■■□ 3.3
DVL1-201ENST00000378888 GTF3C3Q9Y5Q9 886 aa35.54■■■■□ 3.28
DVL1-201ENST00000378888 RUSC2Q8N2Y8 1516 aa35.49■■■■□ 3.27
DVL1-201ENST00000378888 NACADO15069 1562 aa35.46■■■■□ 3.27
DVL1-201ENST00000378888 ACIN1Q9UKV3 1341 aaKnown RBP35.46■■■■□ 3.27
DVL1-201ENST00000378888 CSRNP3Q8WYN3 585 aa35.44■■■■□ 3.26
DVL1-201ENST00000378888 CEP162Q5TB80 1403 aa35.42■■■■□ 3.26
DVL1-201ENST00000378888 CENPBP07199 599 aaPredicted RBP35.22■■■■□ 3.23
DVL1-201ENST00000378888 BAZ1AQ9NRL2 1556 aaPredicted RBP35.19■■■■□ 3.22
DVL1-201ENST00000378888 APLP2Q06481 763 aa35.17■■■■□ 3.22
DVL1-201ENST00000378888 ZNF316A6NFI3 1004 aaPredicted RBP35.06■■■■□ 3.2
DVL1-201ENST00000378888 ITGAEP38570 1179 aa35.04■■■■□ 3.2
DVL1-201ENST00000378888 MIER1Q8N108 512 aa35.03■■■■□ 3.2
DVL1-201ENST00000378888 TNIKQ9UKE5 1360 aa34.95■■■■□ 3.19
DVL1-201ENST00000378888 SMARCA2P51531 1590 aa34.93■■■■□ 3.18
DVL1-201ENST00000378888 TOP2AP11388 1531 aaKnown RBP34.92■■■■□ 3.18
DVL1-201ENST00000378888 SMARCA4P51532 1647 aa34.88■■■■□ 3.18
DVL1-201ENST00000378888 WRNQ14191 1432 aaPredicted RBP eCLIP34.83■■■■□ 3.171e-6■■■■□ 25.1
DVL1-201ENST00000378888 EIF4G1Q04637 1599 aaKnown RBP34.82■■■■□ 3.16
DVL1-201ENST00000378888 CLIP1P30622 1438 aa34.73■■■■□ 3.15
DVL1-201ENST00000378888 GOLGA3Q08378 1498 aa34.72■■■■□ 3.15
DVL1-201ENST00000378888 ATP1B4Q9UN42 357 aaPredicted RBP34.59■■■■□ 3.13
DVL1-201ENST00000378888 RAPGEF2Q9Y4G8 1499 aa34.55■■■■□ 3.12
DVL1-201ENST00000378888 KANK4Q5T7N3 995 aaPredicted RBP34.52■■■■□ 3.12
DVL1-201ENST00000378888 SYNJ1O43426 1573 aa34.46■■■■□ 3.11
DVL1-201ENST00000378888 UNC13AQ9UPW8 1703 aa34.46■■■■□ 3.11
DVL1-201ENST00000378888 EEA1Q15075 1411 aa34.41■■■■□ 3.1
DVL1-201ENST00000378888 CEP164Q9UPV0 1460 aa34.39■■■■□ 3.1
DVL1-201ENST00000378888 P3H3Q8IVL6 736 aa34.36■■■■□ 3.09
DVL1-201ENST00000378888 BAZ1BQ9UIG0 1483 aaKnown RBP34.29■■■■□ 3.08
DVL1-201ENST00000378888 VPS8Q8N3P4 1428 aa34.28■■■■□ 3.08
DVL1-201ENST00000378888 HIRIP3Q9BW71 556 aaPredicted RBP34.25■■■■□ 3.07
DVL1-201ENST00000378888 KCNH8Q96L42 1107 aa34.18■■■■□ 3.06
DVL1-201ENST00000378888 BCANQ96GW7 911 aa34.17■■■■□ 3.06
DVL1-201ENST00000378888 BICRAQ9NZM4 1560 aa34.16■■■■□ 3.06
DVL1-201ENST00000378888 ATAD2BQ9ULI0 1458 aa34.16■■■■□ 3.06
DVL1-201ENST00000378888 FAM50AQ14320 339 aaKnown RBP34.11■■■■□ 3.05
DVL1-201ENST00000378888 MYT1Q01538 1121 aa34.09■■■■□ 3.05
DVL1-201ENST00000378888 KIF21BO75037 1637 aa34.05■■■■□ 3.04
DVL1-201ENST00000378888 DHX57Q6P158 1386 aaKnown RBP33.98■■■■□ 3.03
DVL1-201ENST00000378888 SIN3AQ96ST3 1273 aa33.96■■■■□ 3.03
DVL1-201ENST00000378888 DDX10Q13206 875 aaKnown RBP33.89■■■■□ 3.02
DVL1-201ENST00000378888 ARAP1Q96P48 1450 aa33.84■■■■□ 3.01
DVL1-201ENST00000378888 SUPT16HQ9Y5B9 1047 aaKnown RBP33.79■■■■□ 3
DVL1-201ENST00000378888 CCNB3Q8WWL7 1395 aa33.68■■■□□ 2.98
DVL1-201ENST00000378888 TRIM52Q96A61 297 aa33.68■■■□□ 2.98
DVL1-201ENST00000378888 ARID3CA6NKF2 412 aa33.65■■■□□ 2.98
DVL1-201ENST00000378888 KIF27Q86VH2 1401 aa33.64■■■□□ 2.98
DVL1-201ENST00000378888 RAB3GAP2Q9H2M9 1393 aa33.62■■■□□ 2.97
DVL1-201ENST00000378888 CNGB1Q14028 1251 aaPredicted RBP33.58■■■□□ 2.97
DVL1-201ENST00000378888 CUX1P39880 1505 aa33.56■■■□□ 2.96
DVL1-201ENST00000378888 CUX2O14529 1486 aa33.55■■■□□ 2.96
DVL1-201ENST00000378888 TOP2BQ02880 1626 aa33.55■■■□□ 2.96
DVL1-201ENST00000378888 PRXQ9BXM0 1461 aa33.54■■■□□ 2.96
DVL1-201ENST00000378888 FKBP8Q14318 412 aa33.53■■■□□ 2.96
DVL1-201ENST00000378888 PEG3Q9GZU2 1588 aa33.51■■■□□ 2.95
DVL1-201ENST00000378888 ARHGAP35Q9NRY4 1499 aa33.48■■■□□ 2.95
DVL1-201ENST00000378888 PHLDB1Q86UU1 1377 aa33.37■■■□□ 2.93
DVL1-201ENST00000378888 IRX6P78412 446 aaPredicted RBP33.36■■■□□ 2.93
DVL1-201ENST00000378888 CARMIL1Q5VZK9 1371 aa33.36■■■□□ 2.93
DVL1-201ENST00000378888 CHIC2Q9UKJ5 165 aa33.34■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms