RNA–Protein interactions for RNA: ENST00000534510.5

CTSB-232, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-232ENST00000534510 NISCHQ9Y2I1 1504 aa36.58■■■■□ 3.45
CTSB-232ENST00000534510 CCDC180Q9P1Z9 1646 aa31.3■■■□□ 2.6
CTSB-232ENST00000534510 ZCCHC6Q5VYS8 1495 aaKnown RBP30.99■■■□□ 2.55
CTSB-232ENST00000534510 SHROOM4Q9ULL8 1493 aa30.97■■■□□ 2.55
CTSB-232ENST00000534510 SUPT5HO00267 1087 aaKnown RBP30.39■■■□□ 2.46
CTSB-232ENST00000534510 DCAF1Q9Y4B6 1507 aa30.14■■■□□ 2.42
CTSB-232ENST00000534510 DCAF8L2P0C7V8 631 aa29.99■■■□□ 2.39
CTSB-232ENST00000534510 CHIC1Q5VXU3 224 aa29.68■■■□□ 2.34
CTSB-232ENST00000534510 MYO15BQ96JP2 1530 aa29.6■■■□□ 2.33
CTSB-232ENST00000534510 ABCC9O60706 1549 aa29.3■■■□□ 2.28
CTSB-232ENST00000534510 SCRIBQ14160 1630 aa29.1■■■□□ 2.25
CTSB-232ENST00000534510 NACADO15069 1562 aa28.94■■■□□ 2.22
CTSB-232ENST00000534510 RSF1Q96T23 1441 aaPredicted RBP28.9■■■□□ 2.22
CTSB-232ENST00000534510 HRCP23327 699 aa28.9■■■□□ 2.22
CTSB-232ENST00000534510 PCGF6Q9BYE7 350 aa28.73■■■□□ 2.19
CTSB-232ENST00000534510 RB1CC1Q8TDY2 1594 aa28.71■■■□□ 2.19
CTSB-232ENST00000534510 LOC105371045A0A1W2PR82 267 aa28.68■■■□□ 2.18
CTSB-232ENST00000534510 CECR2Q9BXF3 1484 aa28.42■■■□□ 2.14
CTSB-232ENST00000534510 TRIM41Q8WV44 630 aa28.4■■■□□ 2.14
CTSB-232ENST00000534510 MROH2BQ7Z745 1585 aa28.39■■■□□ 2.13
CTSB-232ENST00000534510 TRIM26Q12899 539 aaPredicted RBP28.31■■■□□ 2.12
CTSB-232ENST00000534510 WIZO95785 1651 aa28.27■■■□□ 2.12
CTSB-232ENST00000534510 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.11
CTSB-232ENST00000534510 PPARGC1BQ86YN6 1023 aaKnown RBP28.12■■■□□ 2.09
CTSB-232ENST00000534510 FAM9AQ8IZU1 332 aaPredicted RBP28.04■■■□□ 2.08
CTSB-232ENST00000534510 EIF4G1Q04637 1599 aaKnown RBP28.02■■■□□ 2.08
CTSB-232ENST00000534510 UNC13AQ9UPW8 1703 aa28.01■■■□□ 2.08
CTSB-232ENST00000534510 TOP2AP11388 1531 aaKnown RBP27.91■■■□□ 2.06
CTSB-232ENST00000534510 SMARCA4P51532 1647 aa27.89■■■□□ 2.06
CTSB-232ENST00000534510 ZEB1P37275 1124 aaPredicted RBP27.81■■■□□ 2.04
CTSB-232ENST00000534510 SMARCA2P51531 1590 aa27.72■■■□□ 2.03
CTSB-232ENST00000534510 EHMT2Q96KQ7 1210 aa27.69■■■□□ 2.02
CTSB-232ENST00000534510 CCDC88BA6NC98 1476 aa27.68■■■□□ 2.02
CTSB-232ENST00000534510 ABCC8Q09428 1581 aa27.6■■■□□ 2.01
CTSB-232ENST00000534510 BICRAQ9NZM4 1560 aa27.6■■■□□ 2.01
CTSB-232ENST00000534510 PEG3Q9GZU2 1588 aa27.41■■□□□ 1.98
CTSB-232ENST00000534510 EEA1Q15075 1411 aa27.39■■□□□ 1.98
CTSB-232ENST00000534510 WRNQ14191 1432 aaPredicted RBP eCLIP27.36■■□□□ 1.97
CTSB-232ENST00000534510 PABPN1Q86U42 306 aaKnown RBP eCLIP27.34■■□□□ 1.97
CTSB-232ENST00000534510 SOGA1O94964 1423 aa27.31■■□□□ 1.96
CTSB-232ENST00000534510 CEP162Q5TB80 1403 aa27.29■■□□□ 1.96
CTSB-232ENST00000534510 TNIKQ9UKE5 1360 aa27.28■■□□□ 1.96
CTSB-232ENST00000534510 CSRNP3Q8WYN3 585 aa27.18■■□□□ 1.94
CTSB-232ENST00000534510 RUSC2Q8N2Y8 1516 aa27.15■■□□□ 1.94
CTSB-232ENST00000534510 GOLGA3Q08378 1498 aa27.15■■□□□ 1.94
CTSB-232ENST00000534510 ATAD2BQ9ULI0 1458 aa27.09■■□□□ 1.93
CTSB-232ENST00000534510 SYNJ1O43426 1573 aa27.06■■□□□ 1.92
CTSB-232ENST00000534510 CCER1Q8TC90 406 aaPredicted RBP27.04■■□□□ 1.92
CTSB-232ENST00000534510 BAZ1BQ9UIG0 1483 aaKnown RBP27.04■■□□□ 1.92
CTSB-232ENST00000534510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.04■■□□□ 1.92
CTSB-232ENST00000534510 UBTFP17480 764 aaKnown RBP27.02■■□□□ 1.92
CTSB-232ENST00000534510 KIF21BO75037 1637 aa27.02■■□□□ 1.92
CTSB-232ENST00000534510 CEP164Q9UPV0 1460 aa26.99■■□□□ 1.91
CTSB-232ENST00000534510 TTBK1Q5TCY1 1321 aaPredicted RBP26.87■■□□□ 1.89
CTSB-232ENST00000534510 TOP2BQ02880 1626 aa26.79■■□□□ 1.88
CTSB-232ENST00000534510 CLIP1P30622 1438 aa26.77■■□□□ 1.88
CTSB-232ENST00000534510 BIVM-ERCC5R4GMW8 1640 aa26.74■■□□□ 1.87
CTSB-232ENST00000534510 HMGXB3Q12766 1538 aa26.73■■□□□ 1.87
CTSB-232ENST00000534510 VPS8Q8N3P4 1428 aa26.7■■□□□ 1.87
CTSB-232ENST00000534510 NCAPD3P42695 1498 aa26.69■■□□□ 1.86
CTSB-232ENST00000534510 RAPGEF2Q9Y4G8 1499 aa26.69■■□□□ 1.86
CTSB-232ENST00000534510 SCAF1Q9H7N4 1312 aaKnown RBP26.58■■□□□ 1.85
CTSB-232ENST00000534510 ERICH3Q5RHP9 1530 aa26.58■■□□□ 1.85
CTSB-232ENST00000534510 DIEXFQ68CQ4 756 aaKnown RBP26.55■■□□□ 1.84
CTSB-232ENST00000534510 APLP2Q06481 763 aa26.5■■□□□ 1.83
CTSB-232ENST00000534510 PRXQ9BXM0 1461 aa26.49■■□□□ 1.83
CTSB-232ENST00000534510 CUX1P39880 1505 aa26.45■■□□□ 1.83
CTSB-232ENST00000534510 HNRNPUL2Q1KMD3 747 aaKnown RBP26.42■■□□□ 1.82
CTSB-232ENST00000534510 ACIN1Q9UKV3 1341 aaKnown RBP26.4■■□□□ 1.82
CTSB-232ENST00000534510 ZNF316A6NFI3 1004 aaPredicted RBP26.39■■□□□ 1.82
CTSB-232ENST00000534510 CFTRP13569 1480 aa26.38■■□□□ 1.81
CTSB-232ENST00000534510 PRDM2Q13029 1718 aa26.36■■□□□ 1.81
CTSB-232ENST00000534510 ARAP1Q96P48 1450 aa26.36■■□□□ 1.81
CTSB-232ENST00000534510 KIF27Q86VH2 1401 aa26.35■■□□□ 1.81
CTSB-232ENST00000534510 RANGAP1P46060 587 aaPredicted RBP26.32■■□□□ 1.8
CTSB-232ENST00000534510 CENPBP07199 599 aaPredicted RBP26.31■■□□□ 1.8
CTSB-232ENST00000534510 PELP1Q8IZL8 1130 aaKnown RBP26.29■■□□□ 1.8
CTSB-232ENST00000534510 NEUROD1Q13562 356 aa26.28■■□□□ 1.8
CTSB-232ENST00000534510 CLSPNQ9HAW4 1339 aa26.13■■□□□ 1.77
CTSB-232ENST00000534510 ARHGAP35Q9NRY4 1499 aa26.11■■□□□ 1.77
CTSB-232ENST00000534510 CC2D2AQ9P2K1 1620 aa26.11■■□□□ 1.77
CTSB-232ENST00000534510 RRBP1Q9P2E9 1410 aaKnown RBP26.1■■□□□ 1.77
CTSB-232ENST00000534510 CADPSQ9ULU8 1353 aa26.08■■□□□ 1.76
CTSB-232ENST00000534510 KANK4Q5T7N3 995 aaPredicted RBP26.07■■□□□ 1.76
CTSB-232ENST00000534510 CUX2O14529 1486 aa26.05■■□□□ 1.76
CTSB-232ENST00000534510 DHX57Q6P158 1386 aaKnown RBP26.04■■□□□ 1.76
CTSB-232ENST00000534510 GTF3C3Q9Y5Q9 886 aa26.02■■□□□ 1.76
CTSB-232ENST00000534510 IGF1RP08069 1367 aa25.99■■□□□ 1.75
CTSB-232ENST00000534510 FGD5Q6ZNL6 1462 aa25.97■■□□□ 1.75
CTSB-232ENST00000534510 MAP3K1Q13233 1512 aa25.95■■□□□ 1.74
CTSB-232ENST00000534510 CCNB3Q8WWL7 1395 aa25.94■■□□□ 1.74
CTSB-232ENST00000534510 MIER1Q8N108 512 aa25.93■■□□□ 1.74
CTSB-232ENST00000534510 TIAM1Q13009 1591 aa25.91■■□□□ 1.74
CTSB-232ENST00000534510 CARMIL1Q5VZK9 1371 aa25.9■■□□□ 1.74
CTSB-232ENST00000534510 YTHDC1Q96MU7 727 aaKnown RBP25.83■■□□□ 1.73
CTSB-232ENST00000534510 FANCD2Q9BXW9 1451 aa25.8■■□□□ 1.72
CTSB-232ENST00000534510 CFAP43Q8NDM7 1665 aa25.79■■□□□ 1.72
CTSB-232ENST00000534510 DNMBPQ6XZF7 1577 aa25.78■■□□□ 1.72
CTSB-232ENST00000534510 FHAD1B1AJZ9 1412 aa25.77■■□□□ 1.72
CTSB-232ENST00000534510 LRRC9Q6ZRR7 1453 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms