RNA–Protein interactions for RNA: ENST00000407521.7

PRDM2-205, Transcript of PR/SET domain 2, humanhuman

TSL 4

Gene PRDM2, Length 513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-205ENST00000407521 NISCHQ9Y2I1 1504 aa28.21■■■□□ 2.11
PRDM2-205ENST00000407521 AEBP2Q6ZN18 517 aaPredicted RBP25.48■■□□□ 1.67
PRDM2-205ENST00000407521 CCDC180Q9P1Z9 1646 aa25.27■■□□□ 1.64
PRDM2-205ENST00000407521 ABCC9O60706 1549 aa24.83■■□□□ 1.57
PRDM2-205ENST00000407521 CHIC1Q5VXU3 224 aa24.46■■□□□ 1.51
PRDM2-205ENST00000407521 RB1CC1Q8TDY2 1594 aa23.82■■□□□ 1.4
PRDM2-205ENST00000407521 NACADO15069 1562 aa23.74■■□□□ 1.39
PRDM2-205ENST00000407521 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
PRDM2-205ENST00000407521 ZCCHC6Q5VYS8 1495 aaKnown RBP23.48■■□□□ 1.35
PRDM2-205ENST00000407521 DCAF8L2P0C7V8 631 aa23.47■■□□□ 1.35
PRDM2-205ENST00000407521 UNC13AQ9UPW8 1703 aa23.43■■□□□ 1.34
PRDM2-205ENST00000407521 DCAF1Q9Y4B6 1507 aa23.36■■□□□ 1.33
PRDM2-205ENST00000407521 BICRAQ9NZM4 1560 aa23.17■■□□□ 1.3
PRDM2-205ENST00000407521 PABPN1Q86U42 306 aaKnown RBP eCLIP23.1■■□□□ 1.29
PRDM2-205ENST00000407521 DNAJC5BQ9UF47 199 aa22.98■■□□□ 1.27
PRDM2-205ENST00000407521 SCRIBQ14160 1630 aa22.97■■□□□ 1.27
PRDM2-205ENST00000407521 SHROOM4Q9ULL8 1493 aa22.86■■□□□ 1.25
PRDM2-205ENST00000407521 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
PRDM2-205ENST00000407521 CC2D2AQ9P2K1 1620 aa22.51■■□□□ 1.19
PRDM2-205ENST00000407521 CECR2Q9BXF3 1484 aa22.34■■□□□ 1.17
PRDM2-205ENST00000407521 SMARCA4P51532 1647 aa21.98■■□□□ 1.11
PRDM2-205ENST00000407521 BAZ1AQ9NRL2 1556 aaPredicted RBP21.88■■□□□ 1.09
PRDM2-205ENST00000407521 NCAPD3P42695 1498 aa21.88■■□□□ 1.09
PRDM2-205ENST00000407521 ATAD2BQ9ULI0 1458 aa21.87■■□□□ 1.09
PRDM2-205ENST00000407521 SMARCA2P51531 1590 aa21.84■■□□□ 1.09
PRDM2-205ENST00000407521 HMGXB3Q12766 1538 aa21.8■■□□□ 1.08
PRDM2-205ENST00000407521 PEG3Q9GZU2 1588 aa21.78■■□□□ 1.08
PRDM2-205ENST00000407521 MROH2BQ7Z745 1585 aa21.74■■□□□ 1.07
PRDM2-205ENST00000407521 SENP3Q9H4L4 574 aaPredicted RBP21.74■■□□□ 1.07
PRDM2-205ENST00000407521 BAZ1BQ9UIG0 1483 aaKnown RBP21.65■■□□□ 1.06
PRDM2-205ENST00000407521 WIZO95785 1651 aa21.53■■□□□ 1.04
PRDM2-205ENST00000407521 PHF23Q9BUL5 403 aaPredicted RBP21.48■■□□□ 1.03
PRDM2-205ENST00000407521 NESP48681 1621 aa21.44■■□□□ 1.02
PRDM2-205ENST00000407521 ERCC6Q03468 1493 aa21.39■■□□□ 1.02
PRDM2-205ENST00000407521 LAMC3Q9Y6N6 1575 aa21.39■■□□□ 1.01
PRDM2-205ENST00000407521 RSF1Q96T23 1441 aaPredicted RBP21.37■■□□□ 1.01
PRDM2-205ENST00000407521 CUX2O14529 1486 aa21.31■■□□□ 1
PRDM2-205ENST00000407521 KIF21AQ7Z4S6 1674 aa21.28■■□□□ 1
PRDM2-205ENST00000407521 TOP2AP11388 1531 aaKnown RBP21.27■■□□□ 1
PRDM2-205ENST00000407521 THOC2Q8NI27 1593 aaKnown RBP21.25■□□□□ 0.99
PRDM2-205ENST00000407521 CADPSQ9ULU8 1353 aa21.2■□□□□ 0.98
PRDM2-205ENST00000407521 PDS5BQ9NTI5 1447 aa21.17■□□□□ 0.98
PRDM2-205ENST00000407521 CFTRP13569 1480 aa21.07■□□□□ 0.96
PRDM2-205ENST00000407521 PRDM2Q13029 1718 aa21.04■□□□□ 0.96
PRDM2-205ENST00000407521 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
PRDM2-205ENST00000407521 WDR62O43379 1518 aa21■□□□□ 0.95
PRDM2-205ENST00000407521 CEP164Q9UPV0 1460 aa20.99■□□□□ 0.95
PRDM2-205ENST00000407521 FANCD2Q9BXW9 1451 aa20.98■□□□□ 0.95
PRDM2-205ENST00000407521 CCDC88BA6NC98 1476 aa20.97■□□□□ 0.95
PRDM2-205ENST00000407521 DNAJC5Q9H3Z4 198 aa20.85■□□□□ 0.93
PRDM2-205ENST00000407521 URB2Q14146 1524 aaKnown RBP20.82■□□□□ 0.92
PRDM2-205ENST00000407521 TOPBP1Q92547 1522 aa20.64■□□□□ 0.9
PRDM2-205ENST00000407521 DNMBPQ6XZF7 1577 aa20.63■□□□□ 0.89
PRDM2-205ENST00000407521 ABCC8Q09428 1581 aa20.59■□□□□ 0.89
PRDM2-205ENST00000407521 IFT140Q96RY7 1462 aa20.55■□□□□ 0.88
PRDM2-205ENST00000407521 SUPT5HO00267 1087 aaKnown RBP20.53■□□□□ 0.88
PRDM2-205ENST00000407521 ZNF608Q9ULD9 1512 aaPredicted RBP20.49■□□□□ 0.87
PRDM2-205ENST00000407521 TARBP1Q13395 1621 aaKnown RBP20.49■□□□□ 0.87
PRDM2-205ENST00000407521 EIF4G3O43432 1585 aaKnown RBP20.46■□□□□ 0.87
PRDM2-205ENST00000407521 POLA1P09884 1462 aaPredicted RBP20.45■□□□□ 0.86
PRDM2-205ENST00000407521 CUX1P39880 1505 aa20.42■□□□□ 0.86
PRDM2-205ENST00000407521 FGD5Q6ZNL6 1462 aa20.37■□□□□ 0.85
PRDM2-205ENST00000407521 RAD54L2Q9Y4B4 1467 aa20.35■□□□□ 0.85
PRDM2-205ENST00000407521 WDR97A6NE52 1622 aa20.33■□□□□ 0.84
PRDM2-205ENST00000407521 AQRO60306 1485 aaKnown RBP eCLIP20.31■□□□□ 0.84
PRDM2-205ENST00000407521 SOGA1O94964 1423 aa20.3■□□□□ 0.84
PRDM2-205ENST00000407521 CHD1O14646 1710 aa20.28■□□□□ 0.84
PRDM2-205ENST00000407521 OSCARQ8IYS5 282 aa20.27■□□□□ 0.84
PRDM2-205ENST00000407521 BIVM-ERCC5R4GMW8 1640 aa20.24■□□□□ 0.83
PRDM2-205ENST00000407521 FOXD1Q16676 465 aa20.21■□□□□ 0.83
PRDM2-205ENST00000407521 TDRD9Q8NDG6 1382 aaKnown RBP20.21■□□□□ 0.83
PRDM2-205ENST00000407521 TOP2BQ02880 1626 aa20.2■□□□□ 0.82
PRDM2-205ENST00000407521 PBRM1Q86U86 1689 aa20.19■□□□□ 0.82
PRDM2-205ENST00000407521 SYNJ1O43426 1573 aa20.18■□□□□ 0.82
PRDM2-205ENST00000407521 ABCA10Q8WWZ4 1543 aa20.17■□□□□ 0.82
PRDM2-205ENST00000407521 ABCA5Q8WWZ7 1642 aa20.16■□□□□ 0.82
PRDM2-205ENST00000407521 SNAPC4Q5SXM2 1469 aa20.15■□□□□ 0.82
PRDM2-205ENST00000407521 WRNQ14191 1432 aaPredicted RBP eCLIP20.14■□□□□ 0.81
PRDM2-205ENST00000407521 RIMBP3CA6NJZ7 1639 aa20.13■□□□□ 0.81
PRDM2-205ENST00000407521 RIMBP3BA6NNM3 1639 aa20.13■□□□□ 0.81
PRDM2-205ENST00000407521 RIMBP3Q9UFD9 1639 aa20.13■□□□□ 0.81
PRDM2-205ENST00000407521 GRIN2BQ13224 1484 aa20.12■□□□□ 0.81
PRDM2-205ENST00000407521 MAGI1Q96QZ7 1491 aaPredicted RBP20.11■□□□□ 0.81
PRDM2-205ENST00000407521 GAPVD1Q14C86 1478 aa20.1■□□□□ 0.81
PRDM2-205ENST00000407521 ARHGEF11O15085 1522 aa20.07■□□□□ 0.8
PRDM2-205ENST00000407521 SYNJ2O15056 1496 aa20.03■□□□□ 0.8
PRDM2-205ENST00000407521 TRIM41Q8WV44 630 aa20.02■□□□□ 0.8
PRDM2-205ENST00000407521 CLASP1Q7Z460 1538 aa20.02■□□□□ 0.79
PRDM2-205ENST00000407521 FBLN2P98095 1184 aa20.01■□□□□ 0.79
PRDM2-205ENST00000407521 ADAMTS12P58397 1594 aa19.97■□□□□ 0.79
PRDM2-205ENST00000407521 CHMP7Q8WUX9 453 aaPredicted RBP19.95■□□□□ 0.78
PRDM2-205ENST00000407521 ERICH3Q5RHP9 1530 aa19.92■□□□□ 0.78
PRDM2-205ENST00000407521 GRIN2AQ12879 1464 aa19.89■□□□□ 0.77
PRDM2-205ENST00000407521 ARAP1Q96P48 1450 aa19.89■□□□□ 0.77
PRDM2-205ENST00000407521 FHAD1B1AJZ9 1412 aa19.85■□□□□ 0.77
PRDM2-205ENST00000407521 CEP170Q5SW79 1584 aa19.84■□□□□ 0.77
PRDM2-205ENST00000407521 NUP160Q12769 1436 aa19.82■□□□□ 0.76
PRDM2-205ENST00000407521 CYB5RLQ6IPT4 315 aa19.77■□□□□ 0.76
PRDM2-205ENST00000407521 SHROOM2Q13796 1616 aa19.76■□□□□ 0.75
PRDM2-205ENST00000407521 CUL7Q14999 1698 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms