RNA–Protein interactions for RNA: ENST00000502727.5

PRDM2-212, Transcript of PR/SET domain 2, humanhuman

TSL 4

Gene PRDM2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-212ENST00000502727 AEBP2Q6ZN18 517 aaPredicted RBP26.68■■□□□ 1.86
PRDM2-212ENST00000502727 CHIC1Q5VXU3 224 aa26.16■■□□□ 1.78
PRDM2-212ENST00000502727 NISCHQ9Y2I1 1504 aa24.57■■□□□ 1.52
PRDM2-212ENST00000502727 PHF23Q9BUL5 403 aaPredicted RBP22.94■■□□□ 1.26
PRDM2-212ENST00000502727 SENP3Q9H4L4 574 aaPredicted RBP22.75■■□□□ 1.23
PRDM2-212ENST00000502727 CCDC180Q9P1Z9 1646 aa21.98■■□□□ 1.11
PRDM2-212ENST00000502727 ABCC9O60706 1549 aa21.62■■□□□ 1.05
PRDM2-212ENST00000502727 PLPPR3Q6T4P5 718 aa21.28■■□□□ 1
PRDM2-212ENST00000502727 FOXD1Q16676 465 aa21.03■□□□□ 0.96
PRDM2-212ENST00000502727 RB1CC1Q8TDY2 1594 aa20.76■□□□□ 0.91
PRDM2-212ENST00000502727 NACADO15069 1562 aa20.69■□□□□ 0.9
PRDM2-212ENST00000502727 DCAF8L2P0C7V8 631 aa20.59■□□□□ 0.89
PRDM2-212ENST00000502727 MYO15BQ96JP2 1530 aa20.51■□□□□ 0.87
PRDM2-212ENST00000502727 ZCCHC6Q5VYS8 1495 aaKnown RBP20.42■□□□□ 0.86
PRDM2-212ENST00000502727 DCAF1Q9Y4B6 1507 aa20.34■□□□□ 0.85
PRDM2-212ENST00000502727 UNC13AQ9UPW8 1703 aa20.34■□□□□ 0.85
PRDM2-212ENST00000502727 PPP6R1Q9UPN7 881 aa20.2■□□□□ 0.82
PRDM2-212ENST00000502727 ADRA2BP18089 450 aa20.19■□□□□ 0.82
PRDM2-212ENST00000502727 PABPN1Q86U42 306 aaKnown RBP eCLIP20.17■□□□□ 0.82
PRDM2-212ENST00000502727 BICRAQ9NZM4 1560 aa20.12■□□□□ 0.81
PRDM2-212ENST00000502727 DNAJC5BQ9UF47 199 aa20.03■□□□□ 0.8
PRDM2-212ENST00000502727 SCRIBQ14160 1630 aa19.98■□□□□ 0.79
PRDM2-212ENST00000502727 SHROOM4Q9ULL8 1493 aa19.91■□□□□ 0.78
PRDM2-212ENST00000502727 PIAS4Q8N2W9 510 aaPredicted RBP19.85■□□□□ 0.77
PRDM2-212ENST00000502727 EIF4G1Q04637 1599 aaKnown RBP19.6■□□□□ 0.73
PRDM2-212ENST00000502727 CC2D2AQ9P2K1 1620 aa19.58■□□□□ 0.73
PRDM2-212ENST00000502727 MSH5O43196 834 aa19.49■□□□□ 0.71
PRDM2-212ENST00000502727 CECR2Q9BXF3 1484 aa19.46■□□□□ 0.71
PRDM2-212ENST00000502727 SMARCA4P51532 1647 aa19.12■□□□□ 0.65
PRDM2-212ENST00000502727 NCAPD3P42695 1498 aa19.09■□□□□ 0.65
PRDM2-212ENST00000502727 BAZ1AQ9NRL2 1556 aaPredicted RBP19.06■□□□□ 0.64
PRDM2-212ENST00000502727 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
PRDM2-212ENST00000502727 SMARCA2P51531 1590 aa19.04■□□□□ 0.64
PRDM2-212ENST00000502727 HMGXB3Q12766 1538 aa18.97■□□□□ 0.63
PRDM2-212ENST00000502727 PEG3Q9GZU2 1588 aa18.94■□□□□ 0.62
PRDM2-212ENST00000502727 MROH2BQ7Z745 1585 aa18.92■□□□□ 0.62
PRDM2-212ENST00000502727 BAZ1BQ9UIG0 1483 aaKnown RBP18.88■□□□□ 0.61
PRDM2-212ENST00000502727 WIZO95785 1651 aa18.74■□□□□ 0.59
PRDM2-212ENST00000502727 PPP4R3CPQ6ZMV5 832 aa18.7■□□□□ 0.58
PRDM2-212ENST00000502727 ERCC6Q03468 1493 aa18.66■□□□□ 0.58
PRDM2-212ENST00000502727 NESP48681 1621 aa18.66■□□□□ 0.58
PRDM2-212ENST00000502727 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.57
PRDM2-212ENST00000502727 RSF1Q96T23 1441 aaPredicted RBP18.64■□□□□ 0.57
PRDM2-212ENST00000502727 LAMC3Q9Y6N6 1575 aa18.61■□□□□ 0.57
PRDM2-212ENST00000502727 CUX2O14529 1486 aa18.55■□□□□ 0.56
PRDM2-212ENST00000502727 TOP2AP11388 1531 aaKnown RBP18.51■□□□□ 0.55
PRDM2-212ENST00000502727 CADPSQ9ULU8 1353 aa18.51■□□□□ 0.55
PRDM2-212ENST00000502727 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
PRDM2-212ENST00000502727 KIF21AQ7Z4S6 1674 aa18.48■□□□□ 0.55
PRDM2-212ENST00000502727 THOC2Q8NI27 1593 aaKnown RBP18.43■□□□□ 0.54
PRDM2-212ENST00000502727 CFTRP13569 1480 aa18.35■□□□□ 0.53
PRDM2-212ENST00000502727 NCBP3Q53F19 620 aaKnown RBP18.3■□□□□ 0.52
PRDM2-212ENST00000502727 MRC2Q9UBG0 1479 aa18.3■□□□□ 0.52
PRDM2-212ENST00000502727 MAPK8IP2Q13387 824 aaPredicted RBP18.29■□□□□ 0.52
PRDM2-212ENST00000502727 PRDM2Q13029 1718 aa18.29■□□□□ 0.52
PRDM2-212ENST00000502727 CCDC88BA6NC98 1476 aa18.28■□□□□ 0.52
PRDM2-212ENST00000502727 FANCD2Q9BXW9 1451 aa18.28■□□□□ 0.52
PRDM2-212ENST00000502727 CEP164Q9UPV0 1460 aa18.28■□□□□ 0.52
PRDM2-212ENST00000502727 WDR62O43379 1518 aa18.25■□□□□ 0.51
PRDM2-212ENST00000502727 KCNA4P22459 653 aa18.24■□□□□ 0.51
PRDM2-212ENST00000502727 CNKSR2Q8WXI2 1034 aa18.23■□□□□ 0.51
PRDM2-212ENST00000502727 DNAJC5Q9H3Z4 198 aa18.22■□□□□ 0.51
PRDM2-212ENST00000502727 DMRT2Q9Y5R5 561 aa18.15■□□□□ 0.5
PRDM2-212ENST00000502727 URB2Q14146 1524 aaKnown RBP18.11■□□□□ 0.49
PRDM2-212ENST00000502727 SUPT5HO00267 1087 aaKnown RBP18.01■□□□□ 0.47
PRDM2-212ENST00000502727 ABCC8Q09428 1581 aa18■□□□□ 0.47
PRDM2-212ENST00000502727 TOPBP1Q92547 1522 aa17.98■□□□□ 0.47
PRDM2-212ENST00000502727 DNMBPQ6XZF7 1577 aa17.95■□□□□ 0.46
PRDM2-212ENST00000502727 NPM3O75607 178 aaKnown RBP17.94■□□□□ 0.46
PRDM2-212ENST00000502727 IFT140Q96RY7 1462 aa17.92■□□□□ 0.46
PRDM2-212ENST00000502727 RNF216Q9NWF9 866 aaPredicted RBP17.88■□□□□ 0.45
PRDM2-212ENST00000502727 ZNF608Q9ULD9 1512 aaPredicted RBP17.83■□□□□ 0.45
PRDM2-212ENST00000502727 TARBP1Q13395 1621 aaKnown RBP17.81■□□□□ 0.44
PRDM2-212ENST00000502727 POLA1P09884 1462 aaPredicted RBP17.81■□□□□ 0.44
PRDM2-212ENST00000502727 HOXD11P31277 338 aaPredicted RBP17.8■□□□□ 0.44
PRDM2-212ENST00000502727 EIF4G3O43432 1585 aaKnown RBP17.77■□□□□ 0.44
PRDM2-212ENST00000502727 CUX1P39880 1505 aa17.77■□□□□ 0.43
PRDM2-212ENST00000502727 OSCARQ8IYS5 282 aa17.76■□□□□ 0.43
PRDM2-212ENST00000502727 FGD5Q6ZNL6 1462 aa17.74■□□□□ 0.43
PRDM2-212ENST00000502727 SOGA1O94964 1423 aa17.73■□□□□ 0.43
PRDM2-212ENST00000502727 RAD54L2Q9Y4B4 1467 aa17.73■□□□□ 0.43
PRDM2-212ENST00000502727 AQRO60306 1485 aaKnown RBP eCLIP17.71■□□□□ 0.43
PRDM2-212ENST00000502727 WDR97A6NE52 1622 aa17.68■□□□□ 0.42
PRDM2-212ENST00000502727 TDRD9Q8NDG6 1382 aaKnown RBP17.65■□□□□ 0.42
PRDM2-212ENST00000502727 POTEDQ86YR6 584 aa17.63■□□□□ 0.41
PRDM2-212ENST00000502727 CHD1O14646 1710 aa17.63■□□□□ 0.41
PRDM2-212ENST00000502727 BIVM-ERCC5R4GMW8 1640 aa17.59■□□□□ 0.41
PRDM2-212ENST00000502727 TOP2BQ02880 1626 aa17.58■□□□□ 0.41
PRDM2-212ENST00000502727 WRNQ14191 1432 aaPredicted RBP eCLIP17.58■□□□□ 0.41
PRDM2-212ENST00000502727 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
PRDM2-212ENST00000502727 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
PRDM2-212ENST00000502727 PBRM1Q86U86 1689 aa17.55■□□□□ 0.4
PRDM2-212ENST00000502727 SYNJ1O43426 1573 aa17.54■□□□□ 0.4
PRDM2-212ENST00000502727 FBLN2P98095 1184 aa17.54■□□□□ 0.4
PRDM2-212ENST00000502727 SNAPC4Q5SXM2 1469 aa17.54■□□□□ 0.4
PRDM2-212ENST00000502727 GAPVD1Q14C86 1478 aa17.53■□□□□ 0.4
PRDM2-212ENST00000502727 MAGI1Q96QZ7 1491 aaPredicted RBP17.53■□□□□ 0.4
PRDM2-212ENST00000502727 ABCA5Q8WWZ7 1642 aa17.51■□□□□ 0.39
PRDM2-212ENST00000502727 TRIM41Q8WV44 630 aa17.49■□□□□ 0.39
PRDM2-212ENST00000502727 RIMBP3CA6NJZ7 1639 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms