RNA–Protein interactions for RNA: ENST00000505823.5

PRDM2-214, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-214ENST00000505823 NISCHQ9Y2I1 1504 aa29.04■■■□□ 2.24
PRDM2-214ENST00000505823 AEBP2Q6ZN18 517 aaPredicted RBP27.66■■■□□ 2.02
PRDM2-214ENST00000505823 CHIC1Q5VXU3 224 aa26.54■■□□□ 1.84
PRDM2-214ENST00000505823 CCDC180Q9P1Z9 1646 aa25.92■■□□□ 1.74
PRDM2-214ENST00000505823 ABCC9O60706 1549 aa25.57■■□□□ 1.68
PRDM2-214ENST00000505823 RB1CC1Q8TDY2 1594 aa24.57■■□□□ 1.52
PRDM2-214ENST00000505823 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
PRDM2-214ENST00000505823 NACADO15069 1562 aa24.49■■□□□ 1.51
PRDM2-214ENST00000505823 MYO15BQ96JP2 1530 aa24.26■■□□□ 1.47
PRDM2-214ENST00000505823 ZCCHC6Q5VYS8 1495 aaKnown RBP24.11■■□□□ 1.45
PRDM2-214ENST00000505823 DCAF1Q9Y4B6 1507 aa24.05■■□□□ 1.44
PRDM2-214ENST00000505823 PABPN1Q86U42 306 aaKnown RBP eCLIP23.9■■□□□ 1.42
PRDM2-214ENST00000505823 UNC13AQ9UPW8 1703 aa23.78■■□□□ 1.4
PRDM2-214ENST00000505823 BICRAQ9NZM4 1560 aa23.65■■□□□ 1.38
PRDM2-214ENST00000505823 SHROOM4Q9ULL8 1493 aa23.61■■□□□ 1.37
PRDM2-214ENST00000505823 SCRIBQ14160 1630 aa23.59■■□□□ 1.37
PRDM2-214ENST00000505823 DNAJC5BQ9UF47 199 aa23.58■■□□□ 1.37
PRDM2-214ENST00000505823 SENP3Q9H4L4 574 aaPredicted RBP23.48■■□□□ 1.35
PRDM2-214ENST00000505823 PHF23Q9BUL5 403 aaPredicted RBP23.33■■□□□ 1.33
PRDM2-214ENST00000505823 EIF4G1Q04637 1599 aaKnown RBP23.14■■□□□ 1.29
PRDM2-214ENST00000505823 CC2D2AQ9P2K1 1620 aa23.09■■□□□ 1.29
PRDM2-214ENST00000505823 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
PRDM2-214ENST00000505823 BAZ1AQ9NRL2 1556 aaPredicted RBP22.59■■□□□ 1.21
PRDM2-214ENST00000505823 NCAPD3P42695 1498 aa22.58■■□□□ 1.2
PRDM2-214ENST00000505823 SMARCA2P51531 1590 aa22.56■■□□□ 1.2
PRDM2-214ENST00000505823 SMARCA4P51532 1647 aa22.55■■□□□ 1.2
PRDM2-214ENST00000505823 ATAD2BQ9ULI0 1458 aa22.53■■□□□ 1.2
PRDM2-214ENST00000505823 HMGXB3Q12766 1538 aa22.42■■□□□ 1.18
PRDM2-214ENST00000505823 BAZ1BQ9UIG0 1483 aaKnown RBP22.39■■□□□ 1.17
PRDM2-214ENST00000505823 PEG3Q9GZU2 1588 aa22.33■■□□□ 1.17
PRDM2-214ENST00000505823 MROH2BQ7Z745 1585 aa22.31■■□□□ 1.16
PRDM2-214ENST00000505823 ERCC6Q03468 1493 aa22.18■■□□□ 1.14
PRDM2-214ENST00000505823 RSF1Q96T23 1441 aaPredicted RBP22.05■■□□□ 1.12
PRDM2-214ENST00000505823 WIZO95785 1651 aa22.04■■□□□ 1.12
PRDM2-214ENST00000505823 LAMC3Q9Y6N6 1575 aa22.02■■□□□ 1.12
PRDM2-214ENST00000505823 NESP48681 1621 aa21.99■■□□□ 1.11
PRDM2-214ENST00000505823 PDS5BQ9NTI5 1447 aa21.98■■□□□ 1.11
PRDM2-214ENST00000505823 CUX2O14529 1486 aa21.98■■□□□ 1.11
PRDM2-214ENST00000505823 CADPSQ9ULU8 1353 aa21.95■■□□□ 1.1
PRDM2-214ENST00000505823 FOXD1Q16676 465 aa21.91■■□□□ 1.1
PRDM2-214ENST00000505823 TOP2AP11388 1531 aaKnown RBP21.88■■□□□ 1.09
PRDM2-214ENST00000505823 CFTRP13569 1480 aa21.71■■□□□ 1.07
PRDM2-214ENST00000505823 KIF21AQ7Z4S6 1674 aa21.7■■□□□ 1.06
PRDM2-214ENST00000505823 THOC2Q8NI27 1593 aaKnown RBP21.69■■□□□ 1.06
PRDM2-214ENST00000505823 CEP164Q9UPV0 1460 aa21.68■■□□□ 1.06
PRDM2-214ENST00000505823 MRC2Q9UBG0 1479 aa21.67■■□□□ 1.06
PRDM2-214ENST00000505823 FANCD2Q9BXW9 1451 aa21.66■■□□□ 1.06
PRDM2-214ENST00000505823 CCDC88BA6NC98 1476 aa21.62■■□□□ 1.05
PRDM2-214ENST00000505823 DNAJC5Q9H3Z4 198 aa21.57■■□□□ 1.04
PRDM2-214ENST00000505823 WDR62O43379 1518 aa21.55■■□□□ 1.04
PRDM2-214ENST00000505823 SUPT5HO00267 1087 aaKnown RBP21.46■■□□□ 1.03
PRDM2-214ENST00000505823 PRDM2Q13029 1718 aa21.46■■□□□ 1.03
PRDM2-214ENST00000505823 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
PRDM2-214ENST00000505823 URB2Q14146 1524 aaKnown RBP21.37■■□□□ 1.01
PRDM2-214ENST00000505823 PLPPR3Q6T4P5 718 aa21.34■■□□□ 1.01
PRDM2-214ENST00000505823 TOPBP1Q92547 1522 aa21.25■□□□□ 0.99
PRDM2-214ENST00000505823 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
PRDM2-214ENST00000505823 DNMBPQ6XZF7 1577 aa21.22■□□□□ 0.99
PRDM2-214ENST00000505823 OSCARQ8IYS5 282 aa21.14■□□□□ 0.97
PRDM2-214ENST00000505823 SOGA1O94964 1423 aa21.05■□□□□ 0.96
PRDM2-214ENST00000505823 POLA1P09884 1462 aaPredicted RBP21.05■□□□□ 0.96
PRDM2-214ENST00000505823 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
PRDM2-214ENST00000505823 FGD5Q6ZNL6 1462 aa20.98■□□□□ 0.95
PRDM2-214ENST00000505823 TARBP1Q13395 1621 aaKnown RBP20.97■□□□□ 0.95
PRDM2-214ENST00000505823 AQRO60306 1485 aaKnown RBP eCLIP20.96■□□□□ 0.95
PRDM2-214ENST00000505823 CUX1P39880 1505 aa20.96■□□□□ 0.95
PRDM2-214ENST00000505823 EIF4G3O43432 1585 aaKnown RBP20.96■□□□□ 0.95
PRDM2-214ENST00000505823 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
PRDM2-214ENST00000505823 WDR97A6NE52 1622 aa20.93■□□□□ 0.94
PRDM2-214ENST00000505823 FBLN2P98095 1184 aa20.92■□□□□ 0.94
PRDM2-214ENST00000505823 TDRD9Q8NDG6 1382 aaKnown RBP20.92■□□□□ 0.94
PRDM2-214ENST00000505823 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.939e-6■■■■■ 50.1
PRDM2-214ENST00000505823 CHMP7Q8WUX9 453 aaPredicted RBP20.84■□□□□ 0.93
PRDM2-214ENST00000505823 GRIN2BQ13224 1484 aa20.82■□□□□ 0.92
PRDM2-214ENST00000505823 TRIM41Q8WV44 630 aa20.81■□□□□ 0.92
PRDM2-214ENST00000505823 GAPVD1Q14C86 1478 aa20.79■□□□□ 0.92
PRDM2-214ENST00000505823 MAGI1Q96QZ7 1491 aaPredicted RBP20.79■□□□□ 0.92
PRDM2-214ENST00000505823 ABCA10Q8WWZ4 1543 aa20.78■□□□□ 0.92
PRDM2-214ENST00000505823 TOP2BQ02880 1626 aa20.77■□□□□ 0.92
PRDM2-214ENST00000505823 PPP6R1Q9UPN7 881 aa20.76■□□□□ 0.91
PRDM2-214ENST00000505823 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
PRDM2-214ENST00000505823 ADRA2BP18089 450 aa20.74■□□□□ 0.91
PRDM2-214ENST00000505823 BIVM-ERCC5R4GMW8 1640 aa20.72■□□□□ 0.91
PRDM2-214ENST00000505823 CHD1O14646 1710 aa20.7■□□□□ 0.9
PRDM2-214ENST00000505823 SYNJ2O15056 1496 aa20.7■□□□□ 0.9
PRDM2-214ENST00000505823 SYNJ1O43426 1573 aa20.68■□□□□ 0.9
PRDM2-214ENST00000505823 PBRM1Q86U86 1689 aa20.64■□□□□ 0.89
PRDM2-214ENST00000505823 ABCA5Q8WWZ7 1642 aa20.64■□□□□ 0.89
PRDM2-214ENST00000505823 ARHGEF11O15085 1522 aa20.62■□□□□ 0.89
PRDM2-214ENST00000505823 RIMBP3CA6NJZ7 1639 aa20.6■□□□□ 0.89
PRDM2-214ENST00000505823 RIMBP3BA6NNM3 1639 aa20.6■□□□□ 0.89
PRDM2-214ENST00000505823 RIMBP3Q9UFD9 1639 aa20.6■□□□□ 0.89
PRDM2-214ENST00000505823 CYB5RLQ6IPT4 315 aa20.56■□□□□ 0.88
PRDM2-214ENST00000505823 PIAS4Q8N2W9 510 aaPredicted RBP20.56■□□□□ 0.88
PRDM2-214ENST00000505823 ERICH3Q5RHP9 1530 aa20.56■□□□□ 0.88
PRDM2-214ENST00000505823 FHAD1B1AJZ9 1412 aa20.55■□□□□ 0.88
PRDM2-214ENST00000505823 GRIN2AQ12879 1464 aa20.51■□□□□ 0.87
PRDM2-214ENST00000505823 KIF27Q86VH2 1401 aa20.51■□□□□ 0.87
PRDM2-214ENST00000505823 CLASP1Q7Z460 1538 aa20.5■□□□□ 0.87
PRDM2-214ENST00000505823 ADAMTS12P58397 1594 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms