RNA–Protein interactions for RNA: ENST00000551043.5

CNOT2-227, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-227ENST00000551043 NISCHQ9Y2I1 1504 aa40.11■■■■■ 4.01
CNOT2-227ENST00000551043 CCDC180Q9P1Z9 1646 aa34.14■■■■□ 3.06
CNOT2-227ENST00000551043 SHROOM4Q9ULL8 1493 aa34.09■■■■□ 3.05
CNOT2-227ENST00000551043 ZCCHC6Q5VYS8 1495 aaKnown RBP33.87■■■■□ 3.01
CNOT2-227ENST00000551043 DCAF8L2P0C7V8 631 aa33.44■■■□□ 2.94
CNOT2-227ENST00000551043 SUPT5HO00267 1087 aaKnown RBP33.34■■■□□ 2.93
CNOT2-227ENST00000551043 DCAF1Q9Y4B6 1507 aa32.88■■■□□ 2.85
CNOT2-227ENST00000551043 CHIC1Q5VXU3 224 aa32.28■■■□□ 2.76
CNOT2-227ENST00000551043 MYO15BQ96JP2 1530 aa32.05■■■□□ 2.72
CNOT2-227ENST00000551043 SCRIBQ14160 1630 aa32.02■■■□□ 2.72
CNOT2-227ENST00000551043 ABCC9O60706 1549 aa31.92■■■□□ 2.7
CNOT2-227ENST00000551043 RSF1Q96T23 1441 aaPredicted RBP31.68■■■□□ 2.66
CNOT2-227ENST00000551043 NACADO15069 1562 aa31.67■■■□□ 2.66
CNOT2-227ENST00000551043 LOC105371045A0A1W2PR82 267 aa31.35■■■□□ 2.61
CNOT2-227ENST00000551043 CECR2Q9BXF3 1484 aa31.33■■■□□ 2.61
CNOT2-227ENST00000551043 RB1CC1Q8TDY2 1594 aa31.26■■■□□ 2.6
CNOT2-227ENST00000551043 MROH2BQ7Z745 1585 aa31.18■■■□□ 2.58
CNOT2-227ENST00000551043 TRIM41Q8WV44 630 aa31.07■■■□□ 2.56
CNOT2-227ENST00000551043 PCGF6Q9BYE7 350 aa31.05■■■□□ 2.56
CNOT2-227ENST00000551043 WIZO95785 1651 aa30.98■■■□□ 2.55
CNOT2-227ENST00000551043 HRCP23327 699 aa30.84■■■□□ 2.53
CNOT2-227ENST00000551043 FAM9AQ8IZU1 332 aaPredicted RBP30.82■■■□□ 2.52
CNOT2-227ENST00000551043 BAZ1AQ9NRL2 1556 aaPredicted RBP30.81■■■□□ 2.52
CNOT2-227ENST00000551043 UNC13AQ9UPW8 1703 aa30.69■■■□□ 2.5
CNOT2-227ENST00000551043 EHMT2Q96KQ7 1210 aa30.58■■■□□ 2.49
CNOT2-227ENST00000551043 SMARCA4P51532 1647 aa30.57■■■□□ 2.49
CNOT2-227ENST00000551043 PABPN1Q86U42 306 aaKnown RBP eCLIP30.54■■■□□ 2.48
CNOT2-227ENST00000551043 TRIM26Q12899 539 aaPredicted RBP30.5■■■□□ 2.47
CNOT2-227ENST00000551043 TOP2AP11388 1531 aaKnown RBP30.48■■■□□ 2.47
CNOT2-227ENST00000551043 EIF4G1Q04637 1599 aaKnown RBP30.42■■■□□ 2.46
CNOT2-227ENST00000551043 CCDC88BA6NC98 1476 aa30.4■■■□□ 2.46
CNOT2-227ENST00000551043 BICRAQ9NZM4 1560 aa30.37■■■□□ 2.45
CNOT2-227ENST00000551043 SMARCA2P51531 1590 aa30.32■■■□□ 2.44
CNOT2-227ENST00000551043 PPARGC1BQ86YN6 1023 aaKnown RBP30.29■■■□□ 2.44
CNOT2-227ENST00000551043 ABCC8Q09428 1581 aa30.22■■■□□ 2.43
CNOT2-227ENST00000551043 PEG3Q9GZU2 1588 aa29.99■■■□□ 2.39
CNOT2-227ENST00000551043 SOGA1O94964 1423 aa29.93■■■□□ 2.38
CNOT2-227ENST00000551043 ATAD2BQ9ULI0 1458 aa29.89■■■□□ 2.37
CNOT2-227ENST00000551043 RUSC2Q8N2Y8 1516 aa29.79■■■□□ 2.36
CNOT2-227ENST00000551043 BAZ1BQ9UIG0 1483 aaKnown RBP29.79■■■□□ 2.36
CNOT2-227ENST00000551043 WRNQ14191 1432 aaPredicted RBP eCLIP29.76■■■□□ 2.35
CNOT2-227ENST00000551043 CSRNP3Q8WYN3 585 aa29.76■■■□□ 2.35
CNOT2-227ENST00000551043 EEA1Q15075 1411 aa29.69■■■□□ 2.34
CNOT2-227ENST00000551043 ZEB1P37275 1124 aaPredicted RBP29.69■■■□□ 2.34
CNOT2-227ENST00000551043 CEP162Q5TB80 1403 aa29.66■■■□□ 2.34
CNOT2-227ENST00000551043 UBTFP17480 764 aaKnown RBP29.64■■■□□ 2.34
CNOT2-227ENST00000551043 TNIKQ9UKE5 1360 aa29.63■■■□□ 2.33
CNOT2-227ENST00000551043 SYNJ1O43426 1573 aa29.59■■■□□ 2.33
CNOT2-227ENST00000551043 TTBK1Q5TCY1 1321 aaPredicted RBP29.52■■■□□ 2.32
CNOT2-227ENST00000551043 GOLGA3Q08378 1498 aa29.48■■■□□ 2.31
CNOT2-227ENST00000551043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.36■■■□□ 2.29
CNOT2-227ENST00000551043 CEP164Q9UPV0 1460 aa29.35■■■□□ 2.29
CNOT2-227ENST00000551043 NCAPD3P42695 1498 aa29.34■■■□□ 2.29
CNOT2-227ENST00000551043 HMGXB3Q12766 1538 aa29.28■■■□□ 2.28
CNOT2-227ENST00000551043 KIF21BO75037 1637 aa29.27■■■□□ 2.28
CNOT2-227ENST00000551043 CCER1Q8TC90 406 aaPredicted RBP29.25■■■□□ 2.27
CNOT2-227ENST00000551043 TOP2BQ02880 1626 aa29.24■■■□□ 2.27
CNOT2-227ENST00000551043 RAPGEF2Q9Y4G8 1499 aa29.2■■■□□ 2.26
CNOT2-227ENST00000551043 CLIP1P30622 1438 aa29.17■■■□□ 2.26
CNOT2-227ENST00000551043 RANGAP1P46060 587 aaPredicted RBP29.14■■■□□ 2.25
CNOT2-227ENST00000551043 BIVM-ERCC5R4GMW8 1640 aa29.11■■■□□ 2.25
CNOT2-227ENST00000551043 CFTRP13569 1480 aa29.05■■■□□ 2.24
CNOT2-227ENST00000551043 CUX1P39880 1505 aa29.04■■■□□ 2.24
CNOT2-227ENST00000551043 VPS8Q8N3P4 1428 aa28.99■■■□□ 2.23
CNOT2-227ENST00000551043 PRXQ9BXM0 1461 aa28.93■■■□□ 2.22
CNOT2-227ENST00000551043 APLP2Q06481 763 aa28.91■■■□□ 2.22
CNOT2-227ENST00000551043 KIF27Q86VH2 1401 aa28.87■■■□□ 2.21
CNOT2-227ENST00000551043 ERICH3Q5RHP9 1530 aa28.85■■■□□ 2.21
CNOT2-227ENST00000551043 HNRNPUL2Q1KMD3 747 aaKnown RBP28.83■■■□□ 2.21
CNOT2-227ENST00000551043 CADPSQ9ULU8 1353 aa28.79■■■□□ 2.2
CNOT2-227ENST00000551043 CC2D2AQ9P2K1 1620 aa28.79■■■□□ 2.2
CNOT2-227ENST00000551043 ARAP1Q96P48 1450 aa28.7■■■□□ 2.19
CNOT2-227ENST00000551043 PRDM2Q13029 1718 aa28.68■■■□□ 2.18
CNOT2-227ENST00000551043 CUX2O14529 1486 aa28.65■■■□□ 2.18
CNOT2-227ENST00000551043 IGF1RP08069 1367 aa28.6■■■□□ 2.17
CNOT2-227ENST00000551043 KANK4Q5T7N3 995 aaPredicted RBP28.59■■■□□ 2.17
CNOT2-227ENST00000551043 FGD5Q6ZNL6 1462 aa28.57■■■□□ 2.16
CNOT2-227ENST00000551043 DIEXFQ68CQ4 756 aaKnown RBP28.53■■■□□ 2.16
CNOT2-227ENST00000551043 ARHGAP35Q9NRY4 1499 aa28.51■■■□□ 2.16
CNOT2-227ENST00000551043 FANCD2Q9BXW9 1451 aa28.5■■■□□ 2.15
CNOT2-227ENST00000551043 CARMIL1Q5VZK9 1371 aa28.47■■■□□ 2.15
CNOT2-227ENST00000551043 NESP48681 1621 aa28.39■■■□□ 2.14
CNOT2-227ENST00000551043 ZNF316A6NFI3 1004 aaPredicted RBP28.38■■■□□ 2.13
CNOT2-227ENST00000551043 RAD54L2Q9Y4B4 1467 aa28.34■■■□□ 2.13
CNOT2-227ENST00000551043 DNMBPQ6XZF7 1577 aa28.28■■■□□ 2.12
CNOT2-227ENST00000551043 RRBP1Q9P2E9 1410 aaKnown RBP28.28■■■□□ 2.12
CNOT2-227ENST00000551043 TOPBP1Q92547 1522 aa28.27■■■□□ 2.12
CNOT2-227ENST00000551043 POLA1P09884 1462 aaPredicted RBP28.26■■■□□ 2.11
CNOT2-227ENST00000551043 SCAF1Q9H7N4 1312 aaKnown RBP28.26■■■□□ 2.11
CNOT2-227ENST00000551043 DNAJC5BQ9UF47 199 aa28.24■■■□□ 2.11
CNOT2-227ENST00000551043 P3H3Q8IVL6 736 aa28.23■■■□□ 2.11
CNOT2-227ENST00000551043 ABCA10Q8WWZ4 1543 aa28.21■■■□□ 2.11
CNOT2-227ENST00000551043 CCNB3Q8WWL7 1395 aa28.2■■■□□ 2.11
CNOT2-227ENST00000551043 DHX57Q6P158 1386 aaKnown RBP28.19■■■□□ 2.1
CNOT2-227ENST00000551043 ITGAEP38570 1179 aa28.18■■■□□ 2.1
CNOT2-227ENST00000551043 TIAM1Q13009 1591 aa28.12■■■□□ 2.09
CNOT2-227ENST00000551043 ATP1B4Q9UN42 357 aaPredicted RBP28.11■■■□□ 2.09
CNOT2-227ENST00000551043 CLSPNQ9HAW4 1339 aa28.1■■■□□ 2.09
CNOT2-227ENST00000551043 NEUROD1Q13562 356 aa28.1■■■□□ 2.09
CNOT2-227ENST00000551043 ACIN1Q9UKV3 1341 aaKnown RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms