RNA–Protein interactions for RNA: ENST00000343137.8

PRDM2-203, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-203ENST00000343137 NISCHQ9Y2I1 1504 aa14.59□□□□□ -0.07
PRDM2-203ENST00000343137 DCAF8L2P0C7V8 631 aa14.18□□□□□ -0.14
PRDM2-203ENST00000343137 SUPT5HO00267 1087 aaKnown RBP13.81□□□□□ -0.2
PRDM2-203ENST00000343137 SHROOM4Q9ULL8 1493 aa13.6□□□□□ -0.23
PRDM2-203ENST00000343137 PELP1Q8IZL8 1130 aaKnown RBP13.2□□□□□ -0.3
PRDM2-203ENST00000343137 ZEB1P37275 1124 aaPredicted RBP13.11□□□□□ -0.31
PRDM2-203ENST00000343137 APLP2Q06481 763 aa13.08□□□□□ -0.32
PRDM2-203ENST00000343137 PCGF6Q9BYE7 350 aa13.06□□□□□ -0.32
PRDM2-203ENST00000343137 EHMT2Q96KQ7 1210 aa13.03□□□□□ -0.32
PRDM2-203ENST00000343137 TRIM41Q8WV44 630 aa12.92□□□□□ -0.34
PRDM2-203ENST00000343137 FAM9AQ8IZU1 332 aaPredicted RBP12.92□□□□□ -0.34
PRDM2-203ENST00000343137 CENPBP07199 599 aaPredicted RBP12.88□□□□□ -0.35
PRDM2-203ENST00000343137 CCER1Q8TC90 406 aaPredicted RBP12.77□□□□□ -0.36
PRDM2-203ENST00000343137 TRIM26Q12899 539 aaPredicted RBP12.73□□□□□ -0.37
PRDM2-203ENST00000343137 HRCP23327 699 aa12.7□□□□□ -0.38
PRDM2-203ENST00000343137 TTBK1Q5TCY1 1321 aaPredicted RBP12.66□□□□□ -0.38
PRDM2-203ENST00000343137 MYT1Q01538 1121 aa12.66□□□□□ -0.38
PRDM2-203ENST00000343137 UBTFP17480 764 aaKnown RBP12.64□□□□□ -0.39
PRDM2-203ENST00000343137 CHIC1Q5VXU3 224 aa12.62□□□□□ -0.39
PRDM2-203ENST00000343137 ERICH6Q7L0X2 663 aa12.49□□□□□ -0.41
PRDM2-203ENST00000343137 RANGAP1P46060 587 aaPredicted RBP12.48□□□□□ -0.41
PRDM2-203ENST00000343137 NEFLP07196 543 aa12.46□□□□□ -0.42
PRDM2-203ENST00000343137 LOC105371045A0A1W2PR82 267 aa12.4□□□□□ -0.42
PRDM2-203ENST00000343137 ATP1B4Q9UN42 357 aaPredicted RBP12.39□□□□□ -0.43
PRDM2-203ENST00000343137 YTHDC1Q96MU7 727 aaKnown RBP12.36□□□□□ -0.43
PRDM2-203ENST00000343137 PPARGC1BQ86YN6 1023 aaKnown RBP12.33□□□□□ -0.43
PRDM2-203ENST00000343137 DIEXFQ68CQ4 756 aaKnown RBP12.18□□□□□ -0.46
PRDM2-203ENST00000343137 HNRNPUL2Q1KMD3 747 aaKnown RBP12.18□□□□□ -0.46
PRDM2-203ENST00000343137 ZCCHC6Q5VYS8 1495 aaKnown RBP12.18□□□□□ -0.46
PRDM2-203ENST00000343137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.13□□□□□ -0.47
PRDM2-203ENST00000343137 CCDC180Q9P1Z9 1646 aa12.12□□□□□ -0.47
PRDM2-203ENST00000343137 DCAF1Q9Y4B6 1507 aa12.11□□□□□ -0.47
PRDM2-203ENST00000343137 ITGAEP38570 1179 aa12.1□□□□□ -0.47
PRDM2-203ENST00000343137 ABCC9O60706 1549 aa12.05□□□□□ -0.48
PRDM2-203ENST00000343137 ZNF316A6NFI3 1004 aaPredicted RBP11.98□□□□□ -0.49
PRDM2-203ENST00000343137 DAXXQ9UER7 740 aaPredicted RBP11.97□□□□□ -0.49
PRDM2-203ENST00000343137 CSRNP3Q8WYN3 585 aa11.93□□□□□ -0.5
PRDM2-203ENST00000343137 FAM50AQ14320 339 aaKnown RBP11.92□□□□□ -0.5
PRDM2-203ENST00000343137 GTF3C3Q9Y5Q9 886 aa11.92□□□□□ -0.5
PRDM2-203ENST00000343137 POLR3GLQ9BT43 218 aa11.9□□□□□ -0.5
PRDM2-203ENST00000343137 SCRIBQ14160 1630 aa11.9□□□□□ -0.51
PRDM2-203ENST00000343137 CLSPNQ9HAW4 1339 aa11.9□□□□□ -0.51
PRDM2-203ENST00000343137 ACIN1Q9UKV3 1341 aaKnown RBP11.89□□□□□ -0.51
PRDM2-203ENST00000343137 PABPN1Q86U42 306 aaKnown RBP eCLIP11.87□□□□□ -0.51
PRDM2-203ENST00000343137 ANP32CO43423 234 aa11.86□□□□□ -0.51
PRDM2-203ENST00000343137 TRIM52Q96A61 297 aa11.81□□□□□ -0.52
PRDM2-203ENST00000343137 RTL5Q5HYW3 569 aaPredicted RBP11.81□□□□□ -0.52
PRDM2-203ENST00000343137 NEUROD1Q13562 356 aa11.81□□□□□ -0.52
PRDM2-203ENST00000343137 MYT1LQ9UL68 1186 aa11.79□□□□□ -0.52
PRDM2-203ENST00000343137 CDK11AQ9UQ88 783 aaPredicted RBP11.76□□□□□ -0.53
PRDM2-203ENST00000343137 EEA1Q15075 1411 aa11.73□□□□□ -0.53
PRDM2-203ENST00000343137 MYO15BQ96JP2 1530 aa11.69□□□□□ -0.54
PRDM2-203ENST00000343137 CNGB1Q14028 1251 aaPredicted RBP11.68□□□□□ -0.54
PRDM2-203ENST00000343137 BCANQ96GW7 911 aa11.67□□□□□ -0.54
PRDM2-203ENST00000343137 RSF1Q96T23 1441 aaPredicted RBP11.67□□□□□ -0.54
PRDM2-203ENST00000343137 RB1CC1Q8TDY2 1594 aa11.64□□□□□ -0.55
PRDM2-203ENST00000343137 NACADO15069 1562 aa11.64□□□□□ -0.55
PRDM2-203ENST00000343137 GOLGA3Q08378 1498 aa11.62□□□□□ -0.55
PRDM2-203ENST00000343137 TONSLQ96HA7 1378 aa11.61□□□□□ -0.55
PRDM2-203ENST00000343137 CLIP1P30622 1438 aa11.59□□□□□ -0.55
PRDM2-203ENST00000343137 SLC4A1APQ9BWU0 796 aaKnown RBP11.59□□□□□ -0.55
PRDM2-203ENST00000343137 ZNF326Q5BKZ1 582 aaKnown RBP11.57□□□□□ -0.56
PRDM2-203ENST00000343137 CEP162Q5TB80 1403 aa11.56□□□□□ -0.56
PRDM2-203ENST00000343137 P3H3Q8IVL6 736 aa11.56□□□□□ -0.56
PRDM2-203ENST00000343137 ANP32AP39687 249 aaKnown RBP11.55□□□□□ -0.56
PRDM2-203ENST00000343137 TNIKQ9UKE5 1360 aa11.55□□□□□ -0.56
PRDM2-203ENST00000343137 FKBP8Q14318 412 aa11.51□□□□□ -0.57
PRDM2-203ENST00000343137 CEP164Q9UPV0 1460 aa11.51□□□□□ -0.57
PRDM2-203ENST00000343137 SCAF1Q9H7N4 1312 aaKnown RBP11.5□□□□□ -0.57
PRDM2-203ENST00000343137 BAZ1AQ9NRL2 1556 aaPredicted RBP11.49□□□□□ -0.57
PRDM2-203ENST00000343137 WRNQ14191 1432 aaPredicted RBP eCLIP11.48□□□□□ -0.579e-6■■■■■ 50.1
PRDM2-203ENST00000343137 DDX10Q13206 875 aaKnown RBP11.47□□□□□ -0.57
PRDM2-203ENST00000343137 ZBTB47Q9UFB7 747 aaPredicted RBP11.46□□□□□ -0.58
PRDM2-203ENST00000343137 CANXP27824 592 aaKnown RBP11.45□□□□□ -0.58
PRDM2-203ENST00000343137 HNRNPUQ00839 825 aaKnown RBP eCLIP11.45□□□□□ -0.58
PRDM2-203ENST00000343137 FBLN2P98095 1184 aa11.45□□□□□ -0.58
PRDM2-203ENST00000343137 MIER1Q8N108 512 aa11.45□□□□□ -0.58
PRDM2-203ENST00000343137 MTUS2Q5JR59 1369 aa11.43□□□□□ -0.58
PRDM2-203ENST00000343137 ZNF777Q9ULD5 760 aaPredicted RBP11.41□□□□□ -0.58
PRDM2-203ENST00000343137 NEFMP07197 916 aa11.41□□□□□ -0.58
PRDM2-203ENST00000343137 BAZ1BQ9UIG0 1483 aaKnown RBP11.41□□□□□ -0.58
PRDM2-203ENST00000343137 KIF27Q86VH2 1401 aa11.4□□□□□ -0.58
PRDM2-203ENST00000343137 ARID3CA6NKF2 412 aa11.37□□□□□ -0.59
PRDM2-203ENST00000343137 FAM9BQ8IZU0 186 aa11.36□□□□□ -0.59
PRDM2-203ENST00000343137 EIF4G2P78344 907 aaKnown RBP eCLIP11.35□□□□□ -0.59
PRDM2-203ENST00000343137 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.34□□□□□ -0.59
PRDM2-203ENST00000343137 TMC1Q8TDI8 760 aa11.34□□□□□ -0.59
PRDM2-203ENST00000343137 MRS2Q9HD23 443 aa11.33□□□□□ -0.6
PRDM2-203ENST00000343137 CCDC136Q96JN2 1154 aa11.33□□□□□ -0.6
PRDM2-203ENST00000343137 NPM2Q86SE8 214 aaKnown RBP11.31□□□□□ -0.6
PRDM2-203ENST00000343137 UPF2Q9HAU5 1272 aaKnown RBP11.31□□□□□ -0.6
PRDM2-203ENST00000343137 CHIC2Q9UKJ5 165 aa11.3□□□□□ -0.6
PRDM2-203ENST00000343137 TSPY4P0CV99 314 aa11.3□□□□□ -0.6
PRDM2-203ENST00000343137 TSPY10P0CW01 314 aa11.3□□□□□ -0.6
PRDM2-203ENST00000343137 TIMELESSQ9UNS1 1208 aa11.3□□□□□ -0.6
PRDM2-203ENST00000343137 CECR2Q9BXF3 1484 aa11.29□□□□□ -0.6
PRDM2-203ENST00000343137 FHAD1B1AJZ9 1412 aa11.29□□□□□ -0.6
PRDM2-203ENST00000343137 VPS8Q8N3P4 1428 aa11.26□□□□□ -0.61
PRDM2-203ENST00000343137 CCNB3Q8WWL7 1395 aa11.25□□□□□ -0.61
PRDM2-203ENST00000343137 WDR43Q15061 677 aaKnown RBP eCLIP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms