RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 NISCHQ9Y2I1 1504 aa33.46■■■□□ 2.95
CNOT2-209ENST00000548159 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
CNOT2-209ENST00000548159 CCDC180Q9P1Z9 1646 aa28.34■■■□□ 2.13
CNOT2-209ENST00000548159 ZCCHC6Q5VYS8 1495 aaKnown RBP28.28■■■□□ 2.12
CNOT2-209ENST00000548159 SUPT5HO00267 1087 aaKnown RBP28.09■■■□□ 2.09
CNOT2-209ENST00000548159 DCAF8L2P0C7V8 631 aa27.92■■■□□ 2.06
CNOT2-209ENST00000548159 DCAF1Q9Y4B6 1507 aa27.36■■□□□ 1.97
CNOT2-209ENST00000548159 CHIC1Q5VXU3 224 aa27.26■■□□□ 1.95
CNOT2-209ENST00000548159 MYO15BQ96JP2 1530 aa27.16■■□□□ 1.94
CNOT2-209ENST00000548159 SCRIBQ14160 1630 aa26.7■■□□□ 1.86
CNOT2-209ENST00000548159 ABCC9O60706 1549 aa26.65■■□□□ 1.86
CNOT2-209ENST00000548159 LOC105371045A0A1W2PR82 267 aa26.54■■□□□ 1.84
CNOT2-209ENST00000548159 RSF1Q96T23 1441 aaPredicted RBP26.52■■□□□ 1.84
CNOT2-209ENST00000548159 PCGF6Q9BYE7 350 aa26.42■■□□□ 1.82
CNOT2-209ENST00000548159 HRCP23327 699 aa26.33■■□□□ 1.81
CNOT2-209ENST00000548159 NACADO15069 1562 aa26.25■■□□□ 1.79
CNOT2-209ENST00000548159 RB1CC1Q8TDY2 1594 aa26.22■■□□□ 1.79
CNOT2-209ENST00000548159 CECR2Q9BXF3 1484 aa26.19■■□□□ 1.78
CNOT2-209ENST00000548159 TRIM41Q8WV44 630 aa26.11■■□□□ 1.77
CNOT2-209ENST00000548159 MROH2BQ7Z745 1585 aa26.06■■□□□ 1.76
CNOT2-209ENST00000548159 FAM9AQ8IZU1 332 aaPredicted RBP25.98■■□□□ 1.75
CNOT2-209ENST00000548159 PPARGC1BQ86YN6 1023 aaKnown RBP25.92■■□□□ 1.74
CNOT2-209ENST00000548159 WIZO95785 1651 aa25.91■■□□□ 1.74
CNOT2-209ENST00000548159 TRIM26Q12899 539 aaPredicted RBP25.84■■□□□ 1.73
CNOT2-209ENST00000548159 EHMT2Q96KQ7 1210 aa25.82■■□□□ 1.72
CNOT2-209ENST00000548159 BAZ1AQ9NRL2 1556 aaPredicted RBP25.66■■□□□ 1.7
CNOT2-209ENST00000548159 UNC13AQ9UPW8 1703 aa25.51■■□□□ 1.67
CNOT2-209ENST00000548159 EIF4G1Q04637 1599 aaKnown RBP25.49■■□□□ 1.67
CNOT2-209ENST00000548159 SMARCA4P51532 1647 aa25.47■■□□□ 1.67
CNOT2-209ENST00000548159 TOP2AP11388 1531 aaKnown RBP25.43■■□□□ 1.66
CNOT2-209ENST00000548159 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
CNOT2-209ENST00000548159 PABPN1Q86U42 306 aaKnown RBP eCLIP25.37■■□□□ 1.65
CNOT2-209ENST00000548159 ABCC8Q09428 1581 aa25.36■■□□□ 1.65
CNOT2-209ENST00000548159 SMARCA2P51531 1590 aa25.33■■□□□ 1.65
CNOT2-209ENST00000548159 BICRAQ9NZM4 1560 aa25.22■■□□□ 1.63
CNOT2-209ENST00000548159 ZEB1P37275 1124 aaPredicted RBP25.18■■□□□ 1.62
CNOT2-209ENST00000548159 SOGA1O94964 1423 aa25.13■■□□□ 1.61
CNOT2-209ENST00000548159 RUSC2Q8N2Y8 1516 aa25.04■■□□□ 1.6
CNOT2-209ENST00000548159 TTBK1Q5TCY1 1321 aaPredicted RBP24.96■■□□□ 1.59
CNOT2-209ENST00000548159 CSRNP3Q8WYN3 585 aa24.96■■□□□ 1.59
CNOT2-209ENST00000548159 CEP162Q5TB80 1403 aa24.95■■□□□ 1.58
CNOT2-209ENST00000548159 PEG3Q9GZU2 1588 aa24.94■■□□□ 1.58
CNOT2-209ENST00000548159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.92■■□□□ 1.58
CNOT2-209ENST00000548159 UBTFP17480 764 aaKnown RBP24.89■■□□□ 1.57
CNOT2-209ENST00000548159 TNIKQ9UKE5 1360 aa24.89■■□□□ 1.57
CNOT2-209ENST00000548159 WRNQ14191 1432 aaPredicted RBP eCLIP24.88■■□□□ 1.57
CNOT2-209ENST00000548159 ATAD2BQ9ULI0 1458 aa24.86■■□□□ 1.57
CNOT2-209ENST00000548159 EEA1Q15075 1411 aa24.84■■□□□ 1.57
CNOT2-209ENST00000548159 CCER1Q8TC90 406 aaPredicted RBP24.78■■□□□ 1.56
CNOT2-209ENST00000548159 SYNJ1O43426 1573 aa24.77■■□□□ 1.56
CNOT2-209ENST00000548159 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
CNOT2-209ENST00000548159 GOLGA3Q08378 1498 aa24.73■■□□□ 1.55
CNOT2-209ENST00000548159 CEP164Q9UPV0 1460 aa24.58■■□□□ 1.53
CNOT2-209ENST00000548159 KIF21BO75037 1637 aa24.53■■□□□ 1.52
CNOT2-209ENST00000548159 RAPGEF2Q9Y4G8 1499 aa24.5■■□□□ 1.51
CNOT2-209ENST00000548159 RANGAP1P46060 587 aaPredicted RBP24.49■■□□□ 1.51
CNOT2-209ENST00000548159 CLIP1P30622 1438 aa24.49■■□□□ 1.51
CNOT2-209ENST00000548159 TOP2BQ02880 1626 aa24.42■■□□□ 1.5
CNOT2-209ENST00000548159 HNRNPUL2Q1KMD3 747 aaKnown RBP24.35■■□□□ 1.49
CNOT2-209ENST00000548159 VPS8Q8N3P4 1428 aa24.35■■□□□ 1.49
CNOT2-209ENST00000548159 NCAPD3P42695 1498 aa24.35■■□□□ 1.49
CNOT2-209ENST00000548159 BIVM-ERCC5R4GMW8 1640 aa24.31■■□□□ 1.48
CNOT2-209ENST00000548159 HMGXB3Q12766 1538 aa24.29■■□□□ 1.48
CNOT2-209ENST00000548159 SCAF1Q9H7N4 1312 aaKnown RBP24.29■■□□□ 1.48
CNOT2-209ENST00000548159 DIEXFQ68CQ4 756 aaKnown RBP24.27■■□□□ 1.48
CNOT2-209ENST00000548159 APLP2Q06481 763 aa24.26■■□□□ 1.47
CNOT2-209ENST00000548159 CUX1P39880 1505 aa24.24■■□□□ 1.47
CNOT2-209ENST00000548159 PRXQ9BXM0 1461 aa24.21■■□□□ 1.47
CNOT2-209ENST00000548159 CFTRP13569 1480 aa24.16■■□□□ 1.46
CNOT2-209ENST00000548159 ERICH3Q5RHP9 1530 aa24.14■■□□□ 1.45
CNOT2-209ENST00000548159 ARAP1Q96P48 1450 aa24.1■■□□□ 1.45
CNOT2-209ENST00000548159 KIF27Q86VH2 1401 aa24.09■■□□□ 1.45
CNOT2-209ENST00000548159 ZNF316A6NFI3 1004 aaPredicted RBP24.08■■□□□ 1.45
CNOT2-209ENST00000548159 KANK4Q5T7N3 995 aaPredicted RBP24.07■■□□□ 1.44
CNOT2-209ENST00000548159 NEUROD1Q13562 356 aa24.06■■□□□ 1.44
CNOT2-209ENST00000548159 ACIN1Q9UKV3 1341 aaKnown RBP24.03■■□□□ 1.44
CNOT2-209ENST00000548159 CADPSQ9ULU8 1353 aa23.92■■□□□ 1.42
CNOT2-209ENST00000548159 ARHGAP35Q9NRY4 1499 aa23.91■■□□□ 1.42
CNOT2-209ENST00000548159 CUX2O14529 1486 aa23.91■■□□□ 1.42
CNOT2-209ENST00000548159 IGF1RP08069 1367 aa23.9■■□□□ 1.42
CNOT2-209ENST00000548159 PRDM2Q13029 1718 aa23.85■■□□□ 1.41
CNOT2-209ENST00000548159 CENPBP07199 599 aaPredicted RBP23.83■■□□□ 1.41
CNOT2-209ENST00000548159 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
CNOT2-209ENST00000548159 DHX57Q6P158 1386 aaKnown RBP23.81■■□□□ 1.4
CNOT2-209ENST00000548159 MIER1Q8N108 512 aa23.8■■□□□ 1.4
CNOT2-209ENST00000548159 GTF3C3Q9Y5Q9 886 aa23.79■■□□□ 1.4
CNOT2-209ENST00000548159 RRBP1Q9P2E9 1410 aaKnown RBP23.78■■□□□ 1.4
CNOT2-209ENST00000548159 CARMIL1Q5VZK9 1371 aa23.78■■□□□ 1.4
CNOT2-209ENST00000548159 CC2D2AQ9P2K1 1620 aa23.77■■□□□ 1.4
CNOT2-209ENST00000548159 YTHDC1Q96MU7 727 aaKnown RBP23.75■■□□□ 1.39
CNOT2-209ENST00000548159 ITGAEP38570 1179 aa23.74■■□□□ 1.39
CNOT2-209ENST00000548159 CCNB3Q8WWL7 1395 aa23.71■■□□□ 1.39
CNOT2-209ENST00000548159 CLSPNQ9HAW4 1339 aa23.68■■□□□ 1.38
CNOT2-209ENST00000548159 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
CNOT2-209ENST00000548159 P3H3Q8IVL6 736 aa23.66■■□□□ 1.38
CNOT2-209ENST00000548159 RAD54L2Q9Y4B4 1467 aa23.63■■□□□ 1.37
CNOT2-209ENST00000548159 NESP48681 1621 aa23.6■■□□□ 1.37
CNOT2-209ENST00000548159 TIAM1Q13009 1591 aa23.59■■□□□ 1.37
CNOT2-209ENST00000548159 ATP1B4Q9UN42 357 aaPredicted RBP23.56■■□□□ 1.36
CNOT2-209ENST00000548159 LRRC9Q6ZRR7 1453 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms