RNA–Protein interactions for RNA: ENST00000511288.1

ACSF2-220, Transcript of acyl-CoA synthetase family member 2, humanhuman

TSL 1 (best)

Gene ACSF2, Length 838 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF2-220ENST00000511288 NISCHQ9Y2I1 1504 aa34.38■■■■□ 3.09
ACSF2-220ENST00000511288 CCDC180Q9P1Z9 1646 aa30.69■■■□□ 2.5
ACSF2-220ENST00000511288 ABCC9O60706 1549 aa30.17■■■□□ 2.42
ACSF2-220ENST00000511288 RB1CC1Q8TDY2 1594 aa28.94■■■□□ 2.22
ACSF2-220ENST00000511288 NACADO15069 1562 aa28.87■■■□□ 2.21
ACSF2-220ENST00000511288 DCAF8L2P0C7V8 631 aa28.71■■■□□ 2.19
ACSF2-220ENST00000511288 MYO15BQ96JP2 1530 aa28.65■■■□□ 2.18
ACSF2-220ENST00000511288 ZCCHC6Q5VYS8 1495 aaKnown RBP28.6■■■□□ 2.17
ACSF2-220ENST00000511288 DCAF1Q9Y4B6 1507 aa28.45■■■□□ 2.15
ACSF2-220ENST00000511288 UNC13AQ9UPW8 1703 aa28.35■■■□□ 2.13
ACSF2-220ENST00000511288 PABPN1Q86U42 306 aaKnown RBP eCLIP28.13■■■□□ 2.096e-6■■■■□ 21.1
ACSF2-220ENST00000511288 BICRAQ9NZM4 1560 aa28.11■■■□□ 2.09
ACSF2-220ENST00000511288 SCRIBQ14160 1630 aa27.94■■■□□ 2.06
ACSF2-220ENST00000511288 DNAJC5BQ9UF47 199 aa27.9■■■□□ 2.06
ACSF2-220ENST00000511288 SHROOM4Q9ULL8 1493 aa27.77■■■□□ 2.04
ACSF2-220ENST00000511288 EIF4G1Q04637 1599 aaKnown RBP27.36■■□□□ 1.97
ACSF2-220ENST00000511288 CC2D2AQ9P2K1 1620 aa27.3■■□□□ 1.96
ACSF2-220ENST00000511288 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
ACSF2-220ENST00000511288 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
ACSF2-220ENST00000511288 BAZ1AQ9NRL2 1556 aaPredicted RBP26.65■■□□□ 1.86
ACSF2-220ENST00000511288 NCAPD3P42695 1498 aa26.64■■□□□ 1.86
ACSF2-220ENST00000511288 ATAD2BQ9ULI0 1458 aa26.62■■□□□ 1.85
ACSF2-220ENST00000511288 SMARCA2P51531 1590 aa26.57■■□□□ 1.84
ACSF2-220ENST00000511288 MROH2BQ7Z745 1585 aa26.5■■□□□ 1.83
ACSF2-220ENST00000511288 HMGXB3Q12766 1538 aa26.49■■□□□ 1.83
ACSF2-220ENST00000511288 PEG3Q9GZU2 1588 aa26.49■■□□□ 1.83
ACSF2-220ENST00000511288 BAZ1BQ9UIG0 1483 aaKnown RBP26.36■■□□□ 1.81
ACSF2-220ENST00000511288 WIZO95785 1651 aa26.21■■□□□ 1.79
ACSF2-220ENST00000511288 RSF1Q96T23 1441 aaPredicted RBP26.1■■□□□ 1.77
ACSF2-220ENST00000511288 NESP48681 1621 aa26.06■■□□□ 1.76
ACSF2-220ENST00000511288 ERCC6Q03468 1493 aa25.98■■□□□ 1.75
ACSF2-220ENST00000511288 LAMC3Q9Y6N6 1575 aa25.98■■□□□ 1.75
ACSF2-220ENST00000511288 TOP2AP11388 1531 aaKnown RBP25.9■■□□□ 1.74
ACSF2-220ENST00000511288 CADPSQ9ULU8 1353 aa25.83■■□□□ 1.73
ACSF2-220ENST00000511288 CUX2O14529 1486 aa25.83■■□□□ 1.73
ACSF2-220ENST00000511288 KIF21AQ7Z4S6 1674 aa25.77■■□□□ 1.72
ACSF2-220ENST00000511288 PDS5BQ9NTI5 1447 aa25.77■■□□□ 1.72
ACSF2-220ENST00000511288 THOC2Q8NI27 1593 aaKnown RBP25.74■■□□□ 1.71
ACSF2-220ENST00000511288 CFTRP13569 1480 aa25.66■■□□□ 1.7
ACSF2-220ENST00000511288 CCDC88BA6NC98 1476 aa25.6■■□□□ 1.69
ACSF2-220ENST00000511288 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
ACSF2-220ENST00000511288 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
ACSF2-220ENST00000511288 CEP164Q9UPV0 1460 aa25.52■■□□□ 1.68
ACSF2-220ENST00000511288 PRDM2Q13029 1718 aa25.49■■□□□ 1.67
ACSF2-220ENST00000511288 WDR62O43379 1518 aa25.48■■□□□ 1.67
ACSF2-220ENST00000511288 URB2Q14146 1524 aaKnown RBP25.32■■□□□ 1.64
ACSF2-220ENST00000511288 DNAJC5Q9H3Z4 198 aa25.26■■□□□ 1.63
ACSF2-220ENST00000511288 SUPT5HO00267 1087 aaKnown RBP25.22■■□□□ 1.63
ACSF2-220ENST00000511288 TOPBP1Q92547 1522 aa25.12■■□□□ 1.61
ACSF2-220ENST00000511288 ABCC8Q09428 1581 aa25.09■■□□□ 1.61
ACSF2-220ENST00000511288 DNMBPQ6XZF7 1577 aa25.08■■□□□ 1.61
ACSF2-220ENST00000511288 IFT140Q96RY7 1462 aa25■■□□□ 1.59
ACSF2-220ENST00000511288 ZNF608Q9ULD9 1512 aaPredicted RBP24.91■■□□□ 1.58
ACSF2-220ENST00000511288 TARBP1Q13395 1621 aaKnown RBP24.89■■□□□ 1.57
ACSF2-220ENST00000511288 POLA1P09884 1462 aaPredicted RBP24.89■■□□□ 1.57
ACSF2-220ENST00000511288 CUX1P39880 1505 aa24.86■■□□□ 1.57
ACSF2-220ENST00000511288 EIF4G3O43432 1585 aaKnown RBP24.82■■□□□ 1.56
ACSF2-220ENST00000511288 FGD5Q6ZNL6 1462 aa24.8■■□□□ 1.56
ACSF2-220ENST00000511288 RAD54L2Q9Y4B4 1467 aa24.78■■□□□ 1.56
ACSF2-220ENST00000511288 SOGA1O94964 1423 aa24.77■■□□□ 1.56
ACSF2-220ENST00000511288 AQRO60306 1485 aaKnown RBP eCLIP24.74■■□□□ 1.55
ACSF2-220ENST00000511288 OSCARQ8IYS5 282 aa24.68■■□□□ 1.54
ACSF2-220ENST00000511288 WDR97A6NE52 1622 aa24.67■■□□□ 1.54
ACSF2-220ENST00000511288 TDRD9Q8NDG6 1382 aaKnown RBP24.65■■□□□ 1.54
ACSF2-220ENST00000511288 BIVM-ERCC5R4GMW8 1640 aa24.61■■□□□ 1.53
ACSF2-220ENST00000511288 WRNQ14191 1432 aaPredicted RBP eCLIP24.61■■□□□ 1.53
ACSF2-220ENST00000511288 TOP2BQ02880 1626 aa24.6■■□□□ 1.53
ACSF2-220ENST00000511288 SYNJ1O43426 1573 aa24.59■■□□□ 1.53
ACSF2-220ENST00000511288 CHD1O14646 1710 aa24.57■■□□□ 1.52
ACSF2-220ENST00000511288 ABCA10Q8WWZ4 1543 aa24.56■■□□□ 1.52
ACSF2-220ENST00000511288 GRIN2BQ13224 1484 aa24.51■■□□□ 1.51
ACSF2-220ENST00000511288 SNAPC4Q5SXM2 1469 aa24.51■■□□□ 1.51
ACSF2-220ENST00000511288 ABCA5Q8WWZ7 1642 aa24.5■■□□□ 1.51
ACSF2-220ENST00000511288 PBRM1Q86U86 1689 aa24.49■■□□□ 1.51
ACSF2-220ENST00000511288 GAPVD1Q14C86 1478 aa24.48■■□□□ 1.51
ACSF2-220ENST00000511288 MAGI1Q96QZ7 1491 aaPredicted RBP24.47■■□□□ 1.51
ACSF2-220ENST00000511288 FBLN2P98095 1184 aa24.42■■□□□ 1.5
ACSF2-220ENST00000511288 SYNJ2O15056 1496 aa24.38■■□□□ 1.49
ACSF2-220ENST00000511288 RIMBP3CA6NJZ7 1639 aa24.36■■□□□ 1.49
ACSF2-220ENST00000511288 RIMBP3BA6NNM3 1639 aa24.36■■□□□ 1.49
ACSF2-220ENST00000511288 RIMBP3Q9UFD9 1639 aa24.36■■□□□ 1.49
ACSF2-220ENST00000511288 CHMP7Q8WUX9 453 aaPredicted RBP24.34■■□□□ 1.49
ACSF2-220ENST00000511288 ARHGEF11O15085 1522 aa24.32■■□□□ 1.48
ACSF2-220ENST00000511288 CLASP1Q7Z460 1538 aa24.3■■□□□ 1.48
ACSF2-220ENST00000511288 TRIM41Q8WV44 630 aa24.29■■□□□ 1.48
ACSF2-220ENST00000511288 ADAMTS12P58397 1594 aa24.27■■□□□ 1.48
ACSF2-220ENST00000511288 ERICH3Q5RHP9 1530 aa24.25■■□□□ 1.47
ACSF2-220ENST00000511288 GRIN2AQ12879 1464 aa24.19■■□□□ 1.46
ACSF2-220ENST00000511288 FHAD1B1AJZ9 1412 aa24.19■■□□□ 1.46
ACSF2-220ENST00000511288 ARAP1Q96P48 1450 aa24.12■■□□□ 1.45
ACSF2-220ENST00000511288 CEP170Q5SW79 1584 aa24.12■■□□□ 1.45
ACSF2-220ENST00000511288 NUP160Q12769 1436 aa24.11■■□□□ 1.45
ACSF2-220ENST00000511288 KIF27Q86VH2 1401 aa24.09■■□□□ 1.45
ACSF2-220ENST00000511288 CYB5RLQ6IPT4 315 aa24.06■■□□□ 1.44
ACSF2-220ENST00000511288 IGF1RP08069 1367 aa24.03■■□□□ 1.44
ACSF2-220ENST00000511288 CUL7Q14999 1698 aa24■■□□□ 1.43
ACSF2-220ENST00000511288 SHROOM2Q13796 1616 aa23.99■■□□□ 1.43
ACSF2-220ENST00000511288 ERCC6L2Q5T890 1561 aa23.94■■□□□ 1.42
ACSF2-220ENST00000511288 RUSC2Q8N2Y8 1516 aa23.92■■□□□ 1.42
ACSF2-220ENST00000511288 CARMIL1Q5VZK9 1371 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms