RNA–Protein interactions for RNA: ENST00000552231.5

CNOT2-236, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 1,545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-236ENST00000552231 NISCHQ9Y2I1 1504 aa42.99■■■■■ 4.47
CNOT2-236ENST00000552231 CCDC180Q9P1Z9 1646 aa38.37■■■■□ 3.73
CNOT2-236ENST00000552231 ABCC9O60706 1549 aa38.08■■■■□ 3.69
CNOT2-236ENST00000552231 RB1CC1Q8TDY2 1594 aa36.41■■■■□ 3.42
CNOT2-236ENST00000552231 NACADO15069 1562 aa36.27■■■■□ 3.4
CNOT2-236ENST00000552231 DCAF8L2P0C7V8 631 aa36.13■■■■□ 3.37
CNOT2-236ENST00000552231 MYO15BQ96JP2 1530 aa35.94■■■■□ 3.34
CNOT2-236ENST00000552231 ZCCHC6Q5VYS8 1495 aaKnown RBP35.69■■■■□ 3.3
CNOT2-236ENST00000552231 DCAF1Q9Y4B6 1507 aa35.57■■■■□ 3.29
CNOT2-236ENST00000552231 PABPN1Q86U42 306 aaKnown RBP eCLIP35.55■■■■□ 3.28
CNOT2-236ENST00000552231 DNAJC5BQ9UF47 199 aa35.52■■■■□ 3.28
CNOT2-236ENST00000552231 UNC13AQ9UPW8 1703 aa35.45■■■■□ 3.26
CNOT2-236ENST00000552231 BICRAQ9NZM4 1560 aa35.33■■■■□ 3.25
CNOT2-236ENST00000552231 SHROOM4Q9ULL8 1493 aa34.98■■■■□ 3.19
CNOT2-236ENST00000552231 SCRIBQ14160 1630 aa34.94■■■■□ 3.18
CNOT2-236ENST00000552231 EIF4G1Q04637 1599 aaKnown RBP34.44■■■■□ 3.1
CNOT2-236ENST00000552231 CC2D2AQ9P2K1 1620 aa34.41■■■■□ 3.1
CNOT2-236ENST00000552231 CECR2Q9BXF3 1484 aa34.31■■■■□ 3.08
CNOT2-236ENST00000552231 NCAPD3P42695 1498 aa33.53■■■□□ 2.96
CNOT2-236ENST00000552231 ATAD2BQ9ULI0 1458 aa33.43■■■□□ 2.94
CNOT2-236ENST00000552231 SMARCA4P51532 1647 aa33.41■■■□□ 2.94
CNOT2-236ENST00000552231 SMARCA2P51531 1590 aa33.35■■■□□ 2.93
CNOT2-236ENST00000552231 BAZ1AQ9NRL2 1556 aaPredicted RBP33.33■■■□□ 2.93
CNOT2-236ENST00000552231 HMGXB3Q12766 1538 aa33.25■■■□□ 2.91
CNOT2-236ENST00000552231 PEG3Q9GZU2 1588 aa33.15■■■□□ 2.9
CNOT2-236ENST00000552231 MROH2BQ7Z745 1585 aa33.1■■■□□ 2.89
CNOT2-236ENST00000552231 BAZ1BQ9UIG0 1483 aaKnown RBP33.09■■■□□ 2.89
CNOT2-236ENST00000552231 ERCC6Q03468 1493 aa32.88■■■□□ 2.85
CNOT2-236ENST00000552231 NESP48681 1621 aa32.8■■■□□ 2.84
CNOT2-236ENST00000552231 CUX2O14529 1486 aa32.77■■■□□ 2.84
CNOT2-236ENST00000552231 LAMC3Q9Y6N6 1575 aa32.66■■■□□ 2.82
CNOT2-236ENST00000552231 WIZO95785 1651 aa32.65■■■□□ 2.82
CNOT2-236ENST00000552231 RSF1Q96T23 1441 aaPredicted RBP32.57■■■□□ 2.8
CNOT2-236ENST00000552231 CADPSQ9ULU8 1353 aa32.52■■■□□ 2.8
CNOT2-236ENST00000552231 PDS5BQ9NTI5 1447 aa32.52■■■□□ 2.8
CNOT2-236ENST00000552231 DNAJC5Q9H3Z4 198 aa32.42■■■□□ 2.78
CNOT2-236ENST00000552231 THOC2Q8NI27 1593 aaKnown RBP32.39■■■□□ 2.78
CNOT2-236ENST00000552231 TOP2AP11388 1531 aaKnown RBP32.33■■■□□ 2.77
CNOT2-236ENST00000552231 KIF21AQ7Z4S6 1674 aa32.31■■■□□ 2.76
CNOT2-236ENST00000552231 CFTRP13569 1480 aa32.2■■■□□ 2.75
CNOT2-236ENST00000552231 MRC2Q9UBG0 1479 aa32.17■■■□□ 2.74
CNOT2-236ENST00000552231 FANCD2Q9BXW9 1451 aa32.1■■■□□ 2.73
CNOT2-236ENST00000552231 CEP164Q9UPV0 1460 aa32.1■■■□□ 2.73
CNOT2-236ENST00000552231 WDR62O43379 1518 aa32.07■■■□□ 2.72
CNOT2-236ENST00000552231 CCDC88BA6NC98 1476 aa31.99■■■□□ 2.71
CNOT2-236ENST00000552231 URB2Q14146 1524 aaKnown RBP31.8■■■□□ 2.68
CNOT2-236ENST00000552231 PRDM2Q13029 1718 aa31.73■■■□□ 2.67
CNOT2-236ENST00000552231 ABCC8Q09428 1581 aa31.53■■■□□ 2.64
CNOT2-236ENST00000552231 TOPBP1Q92547 1522 aa31.52■■■□□ 2.64
CNOT2-236ENST00000552231 IFT140Q96RY7 1462 aa31.47■■■□□ 2.63
CNOT2-236ENST00000552231 DNMBPQ6XZF7 1577 aa31.42■■■□□ 2.62
CNOT2-236ENST00000552231 OSCARQ8IYS5 282 aa31.35■■■□□ 2.61
CNOT2-236ENST00000552231 ZNF608Q9ULD9 1512 aaPredicted RBP31.35■■■□□ 2.61
CNOT2-236ENST00000552231 SUPT5HO00267 1087 aaKnown RBP31.33■■■□□ 2.61
CNOT2-236ENST00000552231 POLA1P09884 1462 aaPredicted RBP31.22■■■□□ 2.59
CNOT2-236ENST00000552231 TARBP1Q13395 1621 aaKnown RBP31.19■■■□□ 2.58
CNOT2-236ENST00000552231 EIF4G3O43432 1585 aaKnown RBP31.15■■■□□ 2.58
CNOT2-236ENST00000552231 AQRO60306 1485 aaKnown RBP eCLIP31.13■■■□□ 2.57
CNOT2-236ENST00000552231 SOGA1O94964 1423 aa31.12■■■□□ 2.57
CNOT2-236ENST00000552231 RAD54L2Q9Y4B4 1467 aa31.09■■■□□ 2.57
CNOT2-236ENST00000552231 CUX1P39880 1505 aa31.08■■■□□ 2.57
CNOT2-236ENST00000552231 FGD5Q6ZNL6 1462 aa31.05■■■□□ 2.56
CNOT2-236ENST00000552231 TRIM41Q8WV44 630 aa31.05■■■□□ 2.56
CNOT2-236ENST00000552231 TDRD9Q8NDG6 1382 aaKnown RBP30.99■■■□□ 2.55
CNOT2-236ENST00000552231 WDR97A6NE52 1622 aa30.94■■■□□ 2.54
CNOT2-236ENST00000552231 FBLN2P98095 1184 aa30.86■■■□□ 2.53
CNOT2-236ENST00000552231 GRIN2BQ13224 1484 aa30.8■■■□□ 2.52
CNOT2-236ENST00000552231 SNAPC4Q5SXM2 1469 aa30.8■■■□□ 2.52
CNOT2-236ENST00000552231 CHD1O14646 1710 aa30.79■■■□□ 2.52
CNOT2-236ENST00000552231 RIMBP3CA6NJZ7 1639 aa30.79■■■□□ 2.52
CNOT2-236ENST00000552231 RIMBP3BA6NNM3 1639 aa30.79■■■□□ 2.52
CNOT2-236ENST00000552231 RIMBP3Q9UFD9 1639 aa30.79■■■□□ 2.52
CNOT2-236ENST00000552231 MAGI1Q96QZ7 1491 aaPredicted RBP30.77■■■□□ 2.52
CNOT2-236ENST00000552231 ARHGEF11O15085 1522 aa30.77■■■□□ 2.52
CNOT2-236ENST00000552231 ABCA10Q8WWZ4 1543 aa30.76■■■□□ 2.52
CNOT2-236ENST00000552231 GAPVD1Q14C86 1478 aa30.73■■■□□ 2.51
CNOT2-236ENST00000552231 CHMP7Q8WUX9 453 aaPredicted RBP30.73■■■□□ 2.51
CNOT2-236ENST00000552231 WRNQ14191 1432 aaPredicted RBP eCLIP30.72■■■□□ 2.51
CNOT2-236ENST00000552231 TOP2BQ02880 1626 aa30.66■■■□□ 2.5
CNOT2-236ENST00000552231 SYNJ2O15056 1496 aa30.66■■■□□ 2.5
CNOT2-236ENST00000552231 BIVM-ERCC5R4GMW8 1640 aa30.63■■■□□ 2.49
CNOT2-236ENST00000552231 ABCA5Q8WWZ7 1642 aa30.62■■■□□ 2.49
CNOT2-236ENST00000552231 SYNJ1O43426 1573 aa30.59■■■□□ 2.49
CNOT2-236ENST00000552231 PBRM1Q86U86 1689 aa30.57■■■□□ 2.48
CNOT2-236ENST00000552231 CYB5RLQ6IPT4 315 aa30.57■■■□□ 2.48
CNOT2-236ENST00000552231 CLASP1Q7Z460 1538 aa30.56■■■□□ 2.48
CNOT2-236ENST00000552231 ARAP1Q96P48 1450 aa30.49■■■□□ 2.47
CNOT2-236ENST00000552231 GRIN2AQ12879 1464 aa30.39■■■□□ 2.46
CNOT2-236ENST00000552231 FHAD1B1AJZ9 1412 aa30.38■■■□□ 2.45
CNOT2-236ENST00000552231 ERICH3Q5RHP9 1530 aa30.37■■■□□ 2.45
CNOT2-236ENST00000552231 ADAMTS12P58397 1594 aa30.36■■■□□ 2.45
CNOT2-236ENST00000552231 NUP160Q12769 1436 aa30.3■■■□□ 2.44
CNOT2-236ENST00000552231 CEP170Q5SW79 1584 aa30.23■■■□□ 2.43
CNOT2-236ENST00000552231 KIF27Q86VH2 1401 aa30.12■■■□□ 2.41
CNOT2-236ENST00000552231 IGF1RP08069 1367 aa30.1■■■□□ 2.41
CNOT2-236ENST00000552231 TRHP20396 242 aaPredicted RBP30.1■■■□□ 2.41
CNOT2-236ENST00000552231 SHROOM2Q13796 1616 aa30.07■■■□□ 2.4
CNOT2-236ENST00000552231 ERCC6L2Q5T890 1561 aa30.06■■■□□ 2.4
CNOT2-236ENST00000552231 JPH4Q96JJ6 628 aa30.03■■■□□ 2.4
CNOT2-236ENST00000552231 PRG4Q92954 1404 aaPredicted RBP29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms