RNA–Protein interactions for RNA: ENST00000376048.9

PRDM2-204, Transcript of PR/SET domain 2, humanhuman

TSL 2 BASIC

Gene PRDM2, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-204ENST00000376048 NISCHQ9Y2I1 1504 aa24.33■■□□□ 1.49
PRDM2-204ENST00000376048 CHIC1Q5VXU3 224 aa22.77■■□□□ 1.24
PRDM2-204ENST00000376048 AEBP2Q6ZN18 517 aaPredicted RBP22.46■■□□□ 1.19
PRDM2-204ENST00000376048 SHROOM4Q9ULL8 1493 aa21.11■□□□□ 0.97
PRDM2-204ENST00000376048 DCAF8L2P0C7V8 631 aa20.75■□□□□ 0.91
PRDM2-204ENST00000376048 SUPT5HO00267 1087 aaKnown RBP20.58■□□□□ 0.89
PRDM2-204ENST00000376048 PHF23Q9BUL5 403 aaPredicted RBP20.56■□□□□ 0.88
PRDM2-204ENST00000376048 CCDC180Q9P1Z9 1646 aa20.54■□□□□ 0.88
PRDM2-204ENST00000376048 ZCCHC6Q5VYS8 1495 aaKnown RBP20.51■□□□□ 0.87
PRDM2-204ENST00000376048 MYO15BQ96JP2 1530 aa20.03■□□□□ 0.8
PRDM2-204ENST00000376048 HRCP23327 699 aa19.93■□□□□ 0.78
PRDM2-204ENST00000376048 PCGF6Q9BYE7 350 aa19.83■□□□□ 0.76
PRDM2-204ENST00000376048 PPARGC1BQ86YN6 1023 aaKnown RBP19.72■□□□□ 0.75
PRDM2-204ENST00000376048 DCAF1Q9Y4B6 1507 aa19.71■□□□□ 0.75
PRDM2-204ENST00000376048 ABCC9O60706 1549 aa19.66■□□□□ 0.74
PRDM2-204ENST00000376048 SCRIBQ14160 1630 aa19.6■□□□□ 0.73
PRDM2-204ENST00000376048 LOC105371045A0A1W2PR82 267 aa19.54■□□□□ 0.72
PRDM2-204ENST00000376048 SLC24A1O60721 1099 aa19.36■□□□□ 0.69
PRDM2-204ENST00000376048 RSF1Q96T23 1441 aaPredicted RBP19.29■□□□□ 0.68
PRDM2-204ENST00000376048 CECR2Q9BXF3 1484 aa19.21■□□□□ 0.67
PRDM2-204ENST00000376048 TRIM26Q12899 539 aaPredicted RBP19.16■□□□□ 0.66
PRDM2-204ENST00000376048 EHMT2Q96KQ7 1210 aa19.16■□□□□ 0.66
PRDM2-204ENST00000376048 FAM9AQ8IZU1 332 aaPredicted RBP19.11■□□□□ 0.65
PRDM2-204ENST00000376048 NACADO15069 1562 aa19.11■□□□□ 0.65
PRDM2-204ENST00000376048 RB1CC1Q8TDY2 1594 aa19.1■□□□□ 0.65
PRDM2-204ENST00000376048 MROH2BQ7Z745 1585 aa19.04■□□□□ 0.64
PRDM2-204ENST00000376048 TRIM41Q8WV44 630 aa19.01■□□□□ 0.63
PRDM2-204ENST00000376048 PLPPR3Q6T4P5 718 aa18.96■□□□□ 0.63
PRDM2-204ENST00000376048 PABPN1Q86U42 306 aaKnown RBP eCLIP18.93■□□□□ 0.62
PRDM2-204ENST00000376048 WIZO95785 1651 aa18.92■□□□□ 0.62
PRDM2-204ENST00000376048 PELP1Q8IZL8 1130 aaKnown RBP18.81■□□□□ 0.6
PRDM2-204ENST00000376048 ZEB1P37275 1124 aaPredicted RBP18.77■□□□□ 0.59
PRDM2-204ENST00000376048 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
PRDM2-204ENST00000376048 UNC13AQ9UPW8 1703 aa18.65■□□□□ 0.58
PRDM2-204ENST00000376048 BAZ1AQ9NRL2 1556 aaPredicted RBP18.64■□□□□ 0.57
PRDM2-204ENST00000376048 SMARCA4P51532 1647 aa18.55■□□□□ 0.56
PRDM2-204ENST00000376048 ABCC8Q09428 1581 aa18.54■□□□□ 0.56
PRDM2-204ENST00000376048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.53■□□□□ 0.56
PRDM2-204ENST00000376048 CCDC88BA6NC98 1476 aa18.53■□□□□ 0.56
PRDM2-204ENST00000376048 KCNA4P22459 653 aa18.5■□□□□ 0.55
PRDM2-204ENST00000376048 BICRAQ9NZM4 1560 aa18.49■□□□□ 0.55
PRDM2-204ENST00000376048 TOP2AP11388 1531 aaKnown RBP18.45■□□□□ 0.54
PRDM2-204ENST00000376048 TTBK1Q5TCY1 1321 aaPredicted RBP18.44■□□□□ 0.54
PRDM2-204ENST00000376048 SMARCA2P51531 1590 aa18.42■□□□□ 0.54
PRDM2-204ENST00000376048 EIF4G1Q04637 1599 aaKnown RBP18.41■□□□□ 0.54
PRDM2-204ENST00000376048 CCER1Q8TC90 406 aaPredicted RBP18.4■□□□□ 0.54
PRDM2-204ENST00000376048 ADRA2BP18089 450 aa18.39■□□□□ 0.53
PRDM2-204ENST00000376048 NEUROD1Q13562 356 aa18.36■□□□□ 0.53
PRDM2-204ENST00000376048 SOGA1O94964 1423 aa18.35■□□□□ 0.53
PRDM2-204ENST00000376048 ACIN1Q9UKV3 1341 aaKnown RBP18.3■□□□□ 0.52
PRDM2-204ENST00000376048 RUSC2Q8N2Y8 1516 aa18.3■□□□□ 0.52
PRDM2-204ENST00000376048 SENP3Q9H4L4 574 aaPredicted RBP18.25■□□□□ 0.51
PRDM2-204ENST00000376048 DIEXFQ68CQ4 756 aaKnown RBP18.23■□□□□ 0.51
PRDM2-204ENST00000376048 GTF3C3Q9Y5Q9 886 aa18.2■□□□□ 0.5
PRDM2-204ENST00000376048 ATAD2BQ9ULI0 1458 aa18.19■□□□□ 0.5
PRDM2-204ENST00000376048 UBTFP17480 764 aaKnown RBP18.18■□□□□ 0.5
PRDM2-204ENST00000376048 RANGAP1P46060 587 aaPredicted RBP18.17■□□□□ 0.5
PRDM2-204ENST00000376048 BAZ1BQ9UIG0 1483 aaKnown RBP18.13■□□□□ 0.49
PRDM2-204ENST00000376048 CSRNP3Q8WYN3 585 aa18.13■□□□□ 0.49
PRDM2-204ENST00000376048 MYT1Q01538 1121 aa18.12■□□□□ 0.49
PRDM2-204ENST00000376048 WRNQ14191 1432 aaPredicted RBP eCLIP18.11■□□□□ 0.499e-6■■■■■ 50.1
PRDM2-204ENST00000376048 CEP162Q5TB80 1403 aa18.07■□□□□ 0.48
PRDM2-204ENST00000376048 CENPBP07199 599 aaPredicted RBP18.05■□□□□ 0.48
PRDM2-204ENST00000376048 PEG3Q9GZU2 1588 aa18.05■□□□□ 0.48
PRDM2-204ENST00000376048 SYNJ1O43426 1573 aa18.05■□□□□ 0.48
PRDM2-204ENST00000376048 YTHDC1Q96MU7 727 aaKnown RBP18■□□□□ 0.47
PRDM2-204ENST00000376048 TNIKQ9UKE5 1360 aa17.94■□□□□ 0.46
PRDM2-204ENST00000376048 ZNF316A6NFI3 1004 aaPredicted RBP17.93■□□□□ 0.46
PRDM2-204ENST00000376048 RTN4Q9NQC3 1192 aaKnown RBP17.89■□□□□ 0.45
PRDM2-204ENST00000376048 HNRNPUL2Q1KMD3 747 aaKnown RBP17.89■□□□□ 0.45
PRDM2-204ENST00000376048 GOLGA3Q08378 1498 aa17.87■□□□□ 0.45
PRDM2-204ENST00000376048 MIER1Q8N108 512 aa17.85■□□□□ 0.45
PRDM2-204ENST00000376048 PPP6R1Q9UPN7 881 aa17.85■□□□□ 0.45
PRDM2-204ENST00000376048 RAPGEF2Q9Y4G8 1499 aa17.85■□□□□ 0.45
PRDM2-204ENST00000376048 EEA1Q15075 1411 aa17.84■□□□□ 0.45
PRDM2-204ENST00000376048 NCAPD3P42695 1498 aa17.77■□□□□ 0.43
PRDM2-204ENST00000376048 CLIP1P30622 1438 aa17.76■□□□□ 0.43
PRDM2-204ENST00000376048 CEP164Q9UPV0 1460 aa17.76■□□□□ 0.43
PRDM2-204ENST00000376048 CUX1P39880 1505 aa17.7■□□□□ 0.42
PRDM2-204ENST00000376048 TOP2BQ02880 1626 aa17.69■□□□□ 0.42
PRDM2-204ENST00000376048 HMGXB3Q12766 1538 aa17.66■□□□□ 0.42
PRDM2-204ENST00000376048 KIF21BO75037 1637 aa17.65■□□□□ 0.42
PRDM2-204ENST00000376048 CFTRP13569 1480 aa17.62■□□□□ 0.41
PRDM2-204ENST00000376048 APLP2Q06481 763 aa17.61■□□□□ 0.41
PRDM2-204ENST00000376048 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
PRDM2-204ENST00000376048 VPS8Q8N3P4 1428 aa17.59■□□□□ 0.41
PRDM2-204ENST00000376048 KANK4Q5T7N3 995 aaPredicted RBP17.57■□□□□ 0.4
PRDM2-204ENST00000376048 BIVM-ERCC5R4GMW8 1640 aa17.57■□□□□ 0.4
PRDM2-204ENST00000376048 SLC4A1APQ9BWU0 796 aaKnown RBP17.56■□□□□ 0.4
PRDM2-204ENST00000376048 CC2D2AQ9P2K1 1620 aa17.54■□□□□ 0.4
PRDM2-204ENST00000376048 PRXQ9BXM0 1461 aa17.54■□□□□ 0.4
PRDM2-204ENST00000376048 KIF27Q86VH2 1401 aa17.52■□□□□ 0.4
PRDM2-204ENST00000376048 CADPSQ9ULU8 1353 aa17.52■□□□□ 0.39
PRDM2-204ENST00000376048 CUX2O14529 1486 aa17.5■□□□□ 0.39
PRDM2-204ENST00000376048 ARAP1Q96P48 1450 aa17.49■□□□□ 0.39
PRDM2-204ENST00000376048 NESP48681 1621 aa17.48■□□□□ 0.39
PRDM2-204ENST00000376048 P3H3Q8IVL6 736 aa17.48■□□□□ 0.39
PRDM2-204ENST00000376048 ITGAEP38570 1179 aa17.45■□□□□ 0.38
PRDM2-204ENST00000376048 IGF1RP08069 1367 aa17.44■□□□□ 0.38
PRDM2-204ENST00000376048 FGD5Q6ZNL6 1462 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms