Protein–RNA interactions for Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.34■■□□□ 1.491e-6■■■■□ 20.9
SMNDC1O75940 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.171e-6■■■■□ 20.9
SMNDC1O75940 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.37■■□□□ 1.011e-6■■■■□ 20.9
SMNDC1O75940 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.61■□□□□ 0.891e-6■■■■□ 20.9
SMNDC1O75940 TANGO2-215ENST00000450019 1689 ntTSL 520.43■□□□□ 0.861e-6■■■■□ 20.9
SMNDC1O75940 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.3■□□□□ 0.841e-6■■■■□ 20.9
SMNDC1O75940 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.6■□□□□ 0.731e-6■■■■□ 20.9
SMNDC1O75940 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.59■□□□□ 0.731e-6■■■■□ 20.9
SMNDC1O75940 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.36■□□□□ 0.691e-6■■■■□ 20.9
SMNDC1O75940 TANGO2-203ENST00000399807 2241 ntTSL 516.66■□□□□ 0.261e-6■■■■□ 20.9
SMNDC1O75940 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.7□□□□□ -0.061e-6■■■■□ 20.9
SMNDC1O75940 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.08■□□□□ 0.968e-19■■■■□ 20.8
SMNDC1O75940 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC14.28□□□□□ -0.128e-19■■■■□ 20.8
SMNDC1O75940 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC13.09□□□□□ -0.318e-19■■■■□ 20.8
SMNDC1O75940 ILF3-204ENST00000585835 849 ntTSL 312.37□□□□□ -0.438e-19■■■■□ 20.8
SMNDC1O75940 ILF3-222ENST00000592763 3866 ntTSL 5 BASIC10.48□□□□□ -0.738e-19■■■■□ 20.8
SMNDC1O75940 NADK-212ENST00000492768 859 ntTSL 323.04■■□□□ 1.282e-6■■■■□ 20.8
SMNDC1O75940 NADK-213ENST00000492845 937 ntTSL 216.22■□□□□ 0.192e-6■■■■□ 20.8
SMNDC1O75940 ESS2-204ENST00000472073 2101 ntTSL 519.33■□□□□ 0.681e-7■■■■□ 20.8
SMNDC1O75940 ESS2-202ENST00000434568 1808 ntTSL 518.52■□□□□ 0.561e-7■■■■□ 20.8
SMNDC1O75940 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.171e-7■■■■□ 20.8
SMNDC1O75940 CD81-203ENST00000464784 794 ntTSL 519.89■□□□□ 0.772e-6■■■■□ 20.8
SMNDC1O75940 CD81-208ENST00000492252 1136 ntTSL 316.16■□□□□ 0.182e-6■■■■□ 20.8
SMNDC1O75940 CD81-213ENST00000527343 720 ntTSL 315.97■□□□□ 0.152e-6■■■■□ 20.8
SMNDC1O75940 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.59□□□□□ -0.072e-6■■■■□ 20.8
SMNDC1O75940 CD81-210ENST00000493525 396 ntTSL 513.63□□□□□ -0.232e-6■■■■□ 20.8
SMNDC1O75940 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.3□□□□□ -0.442e-6■■■■□ 20.8
SMNDC1O75940 C19orf48-207ENST00000596655 1639 ntTSL 218.52■□□□□ 0.562e-9■■■■□ 20.8
SMNDC1O75940 C19orf48-212ENST00000600373 709 ntTSL 212.31□□□□□ -0.442e-9■■■■□ 20.8
SMNDC1O75940 C19orf48-205ENST00000596287 827 ntTSL 210.42□□□□□ -0.742e-9■■■■□ 20.8
SMNDC1O75940 MAD1L1-219ENST00000481633 548 ntTSL 212.77□□□□□ -0.372e-6■■■■□ 20.8
SMNDC1O75940 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41e-7■■■■□ 20.8
SMNDC1O75940 EEF1D-216ENST00000526710 996 ntTSL 218.48■□□□□ 0.554e-7■■■■□ 20.8
SMNDC1O75940 EEF1D-228ENST00000529832 600 ntTSL 416.78■□□□□ 0.283e-7■■■■□ 20.8
SMNDC1O75940 EEF1D-209ENST00000524900 343 ntTSL 515.74■□□□□ 0.113e-7■■■■□ 20.8
SMNDC1O75940 EEF1D-231ENST00000530306 583 ntTSL 213.94□□□□□ -0.183e-7■■■■□ 20.8
SMNDC1O75940 EEF1D-245ENST00000532596 761 ntTSL 413.43□□□□□ -0.264e-7■■■■□ 20.8
SMNDC1O75940 EEF1D-211ENST00000525261 559 ntTSL 213.43□□□□□ -0.263e-7■■■■□ 20.8
SMNDC1O75940 EEF1D-233ENST00000530545 616 ntTSL 412.22□□□□□ -0.453e-7■■■■□ 20.8
SMNDC1O75940 EEF1D-220ENST00000528303 558 ntTSL 411.66□□□□□ -0.543e-7■■■■□ 20.8
SMNDC1O75940 EEF1D-254ENST00000534475 538 ntTSL 411.26□□□□□ -0.613e-7■■■■□ 20.8
SMNDC1O75940 EEF1D-242ENST00000531953 506 ntTSL 411.15□□□□□ -0.623e-7■■■■□ 20.8
SMNDC1O75940 EEF1D-213ENST00000526133 367 ntTSL 28.89□□□□□ -0.993e-7■■■■□ 20.8
SMNDC1O75940 EEF1D-255ENST00000534804 555 ntTSL 47.59□□□□□ -1.193e-7■■■■□ 20.8
SMNDC1O75940 ALDOA-220ENST00000566846 512 ntTSL 210.47□□□□□ -0.733e-7■■■■□ 20.8
SMNDC1O75940 ALDOA-205ENST00000562168 666 ntTSL 310.09□□□□□ -0.793e-7■■■■□ 20.8
SMNDC1O75940 ALDOA-210ENST00000563987 586 ntTSL 29.7□□□□□ -0.863e-7■■■■□ 20.8
SMNDC1O75940 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.03■■■□□ 2.246e-11■■■■□ 20.7
SMNDC1O75940 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.527e-6■■■■□ 20.7
SMNDC1O75940 PLXNA3-208ENST00000495040 421 ntTSL 523.97■■□□□ 1.437e-6■■■■□ 20.7
SMNDC1O75940 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.96■□□□□ 0.797e-6■■■■□ 20.7
SMNDC1O75940 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.766e-11■■■■□ 20.7
SMNDC1O75940 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.77e-6■■■■□ 20.7
SMNDC1O75940 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.66e-11■■■■□ 20.7
SMNDC1O75940 P3H1-207ENST00000460031 2726 ntTSL 517.49■□□□□ 0.397e-6■■■■□ 20.7
SMNDC1O75940 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.297e-6■■■■□ 20.7
SMNDC1O75940 P3H1-214ENST00000495874 2813 ntTSL 216.22■□□□□ 0.197e-6■■■■□ 20.7
SMNDC1O75940 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.187e-6■■■■□ 20.7
SMNDC1O75940 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.137e-6■■■■□ 20.7
SMNDC1O75940 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.7■□□□□ 0.17e-6■■■■□ 20.7
SMNDC1O75940 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.65■□□□□ 0.17e-6■■■■□ 20.7
SMNDC1O75940 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.5■□□□□ 0.077e-6■■■■□ 20.7
SMNDC1O75940 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.077e-6■■■■□ 20.7
SMNDC1O75940 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.067e-6■■■■□ 20.7
SMNDC1O75940 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.057e-6■■■■□ 20.7
SMNDC1O75940 CSNK1G2-204ENST00000589350 780 ntTSL 515.31■□□□□ 0.047e-6■■■■□ 20.7
SMNDC1O75940 CLPTM1L-207ENST00000506641 792 ntTSL 515□□□□□ -0.017e-6■■■■□ 20.7
SMNDC1O75940 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.72□□□□□ -0.056e-11■■■■□ 20.7
SMNDC1O75940 CIRBP-240ENST00000592815 334 ntTSL 414.51□□□□□ -0.097e-6■■■■□ 20.7
SMNDC1O75940 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.17e-6■■■■□ 20.7
SMNDC1O75940 ABCC1-207ENST00000575422 1198 ntTSL 514.34□□□□□ -0.117e-6■■■■□ 20.7
SMNDC1O75940 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.127e-6■■■■□ 20.7
SMNDC1O75940 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.236e-11■■■■□ 20.7
SMNDC1O75940 HDLBP-241ENST00000487169 4339 ntTSL 213.45□□□□□ -0.267e-6■■■■□ 20.7
SMNDC1O75940 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.277e-6■■■■□ 20.7
SMNDC1O75940 HPS1-214ENST00000498219 845 ntTSL 513.17□□□□□ -0.37e-6■■■■□ 20.7
SMNDC1O75940 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC13.15□□□□□ -0.37e-6■■■■□ 20.7
SMNDC1O75940 HDLBP-247ENST00000498595 595 ntTSL 513.11□□□□□ -0.317e-6■■■■□ 20.7
SMNDC1O75940 CLPTM1L-214ENST00000513250 567 ntTSL 313.09□□□□□ -0.317e-6■■■■□ 20.7
SMNDC1O75940 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.327e-6■■■■□ 20.7
SMNDC1O75940 ZEB2-237ENST00000636732 5073 ntTSL 512.8□□□□□ -0.367e-6■■■■□ 20.7
SMNDC1O75940 HPS1-209ENST00000470095 801 ntTSL 512.66□□□□□ -0.387e-6■■■■□ 20.7
SMNDC1O75940 HPS1-201ENST00000325103 3703 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.397e-6■■■■□ 20.7
SMNDC1O75940 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.56□□□□□ -0.46e-11■■■■□ 20.7
SMNDC1O75940 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC12.45□□□□□ -0.427e-6■■■■□ 20.7
SMNDC1O75940 ZEB2-233ENST00000636179 8984 ntTSL 512.45□□□□□ -0.427e-6■■■■□ 20.7
SMNDC1O75940 CSNK1G2-210ENST00000614707 249 ntTSL 212.3□□□□□ -0.447e-6■■■■□ 20.7
SMNDC1O75940 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC12.3□□□□□ -0.447e-6■■■■□ 20.7
SMNDC1O75940 SUPT5H-218ENST00000600818 718 ntTSL 212.08□□□□□ -0.486e-11■■■■□ 20.7
SMNDC1O75940 CLPTM1L-203ENST00000503151 627 ntTSL 311.97□□□□□ -0.497e-6■■■■□ 20.7
SMNDC1O75940 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.517e-6■■■■□ 20.7
SMNDC1O75940 HPS1-203ENST00000359632 978 ntTSL 311.7□□□□□ -0.547e-6■■■■□ 20.7
SMNDC1O75940 HPS1-211ENST00000478087 971 ntTSL 511.7□□□□□ -0.547e-6■■■■□ 20.7
SMNDC1O75940 ZNF800-206ENST00000439506 410 ntTSL 1 (best)11.63□□□□□ -0.557e-6■■■■□ 20.7
SMNDC1O75940 CLPTM1L-210ENST00000508765 631 ntTSL 311.6□□□□□ -0.557e-6■■■■□ 20.7
SMNDC1O75940 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC11.55□□□□□ -0.567e-6■■■■□ 20.7
SMNDC1O75940 ZEB2-202ENST00000392861 1514 ntTSL 1 (best)11.5□□□□□ -0.577e-6■■■■□ 20.7
SMNDC1O75940 HPS1-208ENST00000467246 2791 ntTSL 1 (best)11.47□□□□□ -0.577e-6■■■■□ 20.7
SMNDC1O75940 CLPTM1L-202ENST00000503042 3540 ntTSL 211.33□□□□□ -0.67e-6■■■■□ 20.7
SMNDC1O75940 HPS1-204ENST00000361490 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.67e-6■■■■□ 20.7
Retrieved 100 of 11,362 protein–RNA pairs in 157.3 ms