RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-240	ENST00000592815	NISCH	Q9Y2I1	1504 aa		39.81	■■■■□ 3.96
CIRBP-240	ENST00000592815	CCDC180	Q9P1Z9	1646 aa		35.52	■■■■□ 3.28
CIRBP-240	ENST00000592815	ABCC9	O60706	1549 aa		35.51	■■■■□ 3.27
CIRBP-240	ENST00000592815	RB1CC1	Q8TDY2	1594 aa		33.81	■■■■□ 3
CIRBP-240	ENST00000592815	DCAF8L2	P0C7V8	631 aa		33.74	■■■□□ 2.99
CIRBP-240	ENST00000592815	NACAD	O15069	1562 aa		33.63	■■■□□ 2.97
CIRBP-240	ENST00000592815	DNAJC5B	Q9UF47	199 aa		33.23	■■■□□ 2.91
CIRBP-240	ENST00000592815	MYO15B	Q96JP2	1530 aa		33.2	■■■□□ 2.91
CIRBP-240	ENST00000592815	PABPN1	Q86U42	306 aa	Known RBP eCLIP	33.2	■■■□□ 2.91
CIRBP-240	ENST00000592815	ZCCHC6	Q5VYS8	1495 aa	Known RBP	33	■■■□□ 2.87
CIRBP-240	ENST00000592815	UNC13A	Q9UPW8	1703 aa		32.93	■■■□□ 2.86
CIRBP-240	ENST00000592815	DCAF1	Q9Y4B6	1507 aa		32.85	■■■□□ 2.85
CIRBP-240	ENST00000592815	BICRA	Q9NZM4	1560 aa		32.8	■■■□□ 2.84
CIRBP-240	ENST00000592815	SCRIB	Q14160	1630 aa		32.48	■■■□□ 2.79
CIRBP-240	ENST00000592815	SHROOM4	Q9ULL8	1493 aa		32.35	■■■□□ 2.77
CIRBP-240	ENST00000592815	CC2D2A	Q9P2K1	1620 aa		32.01	■■■□□ 2.72
CIRBP-240	ENST00000592815	EIF4G1	Q04637	1599 aa	Known RBP	31.99	■■■□□ 2.71
CIRBP-240	ENST00000592815	CECR2	Q9BXF3	1484 aa		31.96	■■■□□ 2.71
CIRBP-240	ENST00000592815	NCAPD3	P42695	1498 aa		31.09	■■■□□ 2.57
CIRBP-240	ENST00000592815	ATAD2B	Q9ULI0	1458 aa		31.02	■■■□□ 2.56
CIRBP-240	ENST00000592815	SMARCA4	P51532	1647 aa		30.97	■■■□□ 2.55
CIRBP-240	ENST00000592815	SMARCA2	P51531	1590 aa		30.9	■■■□□ 2.54
CIRBP-240	ENST00000592815	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	30.87	■■■□□ 2.53
CIRBP-240	ENST00000592815	HMGXB3	Q12766	1538 aa		30.79	■■■□□ 2.52
CIRBP-240	ENST00000592815	BAZ1B	Q9UIG0	1483 aa	Known RBP	30.72	■■■□□ 2.51
CIRBP-240	ENST00000592815	MROH2B	Q7Z745	1585 aa		30.7	■■■□□ 2.5
CIRBP-240	ENST00000592815	PEG3	Q9GZU2	1588 aa		30.65	■■■□□ 2.5
CIRBP-240	ENST00000592815	ERCC6	Q03468	1493 aa		30.64	■■■□□ 2.5
CIRBP-240	ENST00000592815	NES	P48681	1621 aa		30.55	■■■□□ 2.48
CIRBP-240	ENST00000592815	CUX2	O14529	1486 aa		30.47	■■■□□ 2.47
CIRBP-240	ENST00000592815	DNAJC5	Q9H3Z4	198 aa		30.36	■■■□□ 2.45
CIRBP-240	ENST00000592815	WIZ	O95785	1651 aa		30.3	■■■□□ 2.44
CIRBP-240	ENST00000592815	LAMC3	Q9Y6N6	1575 aa		30.29	■■■□□ 2.44
CIRBP-240	ENST00000592815	PDS5B	Q9NTI5	1447 aa		30.2	■■■□□ 2.42
CIRBP-240	ENST00000592815	CADPS	Q9ULU8	1353 aa		30.19	■■■□□ 2.42
CIRBP-240	ENST00000592815	RSF1	Q96T23	1441 aa	Predicted RBP	30.17	■■■□□ 2.42
CIRBP-240	ENST00000592815	THOC2	Q8NI27	1593 aa	Known RBP	30.08	■■■□□ 2.41
CIRBP-240	ENST00000592815	KIF21A	Q7Z4S6	1674 aa		30.04	■■■□□ 2.4
CIRBP-240	ENST00000592815	TOP2A	P11388	1531 aa	Known RBP	29.92	■■■□□ 2.38
CIRBP-240	ENST00000592815	MRC2	Q9UBG0	1479 aa		29.88	■■■□□ 2.37
CIRBP-240	ENST00000592815	CFTR	P13569	1480 aa		29.85	■■■□□ 2.37
CIRBP-240	ENST00000592815	FANCD2	Q9BXW9	1451 aa		29.81	■■■□□ 2.36
CIRBP-240	ENST00000592815	CEP164	Q9UPV0	1460 aa		29.8	■■■□□ 2.36
CIRBP-240	ENST00000592815	WDR62	O43379	1518 aa		29.76	■■■□□ 2.36
CIRBP-240	ENST00000592815	CCDC88B	A6NC98	1476 aa		29.67	■■■□□ 2.34
CIRBP-240	ENST00000592815	URB2	Q14146	1524 aa	Known RBP	29.54	■■■□□ 2.32
CIRBP-240	ENST00000592815	PRDM2	Q13029	1718 aa		29.37	■■■□□ 2.29
CIRBP-240	ENST00000592815	TOPBP1	Q92547	1522 aa		29.25	■■■□□ 2.27
CIRBP-240	ENST00000592815	OSCAR	Q8IYS5	282 aa		29.25	■■■□□ 2.27
CIRBP-240	ENST00000592815	IFT140	Q96RY7	1462 aa		29.22	■■■□□ 2.27
CIRBP-240	ENST00000592815	ABCC8	Q09428	1581 aa		29.21	■■■□□ 2.27
CIRBP-240	ENST00000592815	ZNF608	Q9ULD9	1512 aa	Predicted RBP	29.17	■■■□□ 2.26
CIRBP-240	ENST00000592815	TRIM41	Q8WV44	630 aa		29.15	■■■□□ 2.26
CIRBP-240	ENST00000592815	DNMBP	Q6XZF7	1577 aa		29.13	■■■□□ 2.25
CIRBP-240	ENST00000592815	SUPT5H	O00267	1087 aa	Known RBP	29.11	■■■□□ 2.25
CIRBP-240	ENST00000592815	AQR	O60306	1485 aa	Known RBP eCLIP	28.97	■■■□□ 2.23	2e-9	■■■■■ 40.3
CIRBP-240	ENST00000592815	POLA1	P09884	1462 aa	Predicted RBP	28.97	■■■□□ 2.23
CIRBP-240	ENST00000592815	TARBP1	Q13395	1621 aa	Known RBP	28.93	■■■□□ 2.22
CIRBP-240	ENST00000592815	EIF4G3	O43432	1585 aa	Known RBP	28.92	■■■□□ 2.22
CIRBP-240	ENST00000592815	SOGA1	O94964	1423 aa		28.91	■■■□□ 2.22
CIRBP-240	ENST00000592815	RAD54L2	Q9Y4B4	1467 aa		28.91	■■■□□ 2.22
CIRBP-240	ENST00000592815	TDRD9	Q8NDG6	1382 aa	Known RBP	28.85	■■■□□ 2.21
CIRBP-240	ENST00000592815	FBLN2	P98095	1184 aa		28.83	■■■□□ 2.21
CIRBP-240	ENST00000592815	FGD5	Q6ZNL6	1462 aa		28.82	■■■□□ 2.2
CIRBP-240	ENST00000592815	CUX1	P39880	1505 aa		28.81	■■■□□ 2.2
CIRBP-240	ENST00000592815	RIMBP3C	A6NJZ7	1639 aa		28.69	■■■□□ 2.18
CIRBP-240	ENST00000592815	RIMBP3B	A6NNM3	1639 aa		28.69	■■■□□ 2.18
CIRBP-240	ENST00000592815	RIMBP3	Q9UFD9	1639 aa		28.69	■■■□□ 2.18
CIRBP-240	ENST00000592815	CHD1	O14646	1710 aa		28.65	■■■□□ 2.18
CIRBP-240	ENST00000592815	ARHGEF11	O15085	1522 aa		28.64	■■■□□ 2.18
CIRBP-240	ENST00000592815	CHMP7	Q8WUX9	453 aa	Predicted RBP	28.63	■■■□□ 2.17
CIRBP-240	ENST00000592815	SNAPC4	Q5SXM2	1469 aa		28.62	■■■□□ 2.17
CIRBP-240	ENST00000592815	WDR97	A6NE52	1622 aa		28.61	■■■□□ 2.17
CIRBP-240	ENST00000592815	GRIN2B	Q13224	1484 aa		28.59	■■■□□ 2.17
CIRBP-240	ENST00000592815	CYB5RL	Q6IPT4	315 aa		28.58	■■■□□ 2.17
CIRBP-240	ENST00000592815	MAGI1	Q96QZ7	1491 aa	Predicted RBP	28.54	■■■□□ 2.16
CIRBP-240	ENST00000592815	GAPVD1	Q14C86	1478 aa		28.53	■■■□□ 2.16
CIRBP-240	ENST00000592815	ABCA10	Q8WWZ4	1543 aa		28.49	■■■□□ 2.15
CIRBP-240	ENST00000592815	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.48	■■■□□ 2.15	1e-6	■■■■■ 58.5
CIRBP-240	ENST00000592815	SYNJ2	O15056	1496 aa		28.46	■■■□□ 2.15
CIRBP-240	ENST00000592815	ARAP1	Q96P48	1450 aa		28.39	■■■□□ 2.13
CIRBP-240	ENST00000592815	SYNJ1	O43426	1573 aa		28.38	■■■□□ 2.13
CIRBP-240	ENST00000592815	TOP2B	Q02880	1626 aa		28.37	■■■□□ 2.13
CIRBP-240	ENST00000592815	CLASP1	Q7Z460	1538 aa		28.37	■■■□□ 2.13
CIRBP-240	ENST00000592815	ABCA5	Q8WWZ7	1642 aa		28.36	■■■□□ 2.13
CIRBP-240	ENST00000592815	PBRM1	Q86U86	1689 aa		28.36	■■■□□ 2.13
CIRBP-240	ENST00000592815	BIVM-ERCC5	R4GMW8	1640 aa		28.32	■■■□□ 2.12
CIRBP-240	ENST00000592815	TRH	P20396	242 aa	Predicted RBP	28.21	■■■□□ 2.11
CIRBP-240	ENST00000592815	GRIN2A	Q12879	1464 aa		28.2	■■■□□ 2.1
CIRBP-240	ENST00000592815	FHAD1	B1AJZ9	1412 aa		28.18	■■■□□ 2.1
CIRBP-240	ENST00000592815	ADAMTS12	P58397	1594 aa		28.15	■■■□□ 2.1
CIRBP-240	ENST00000592815	ERICH3	Q5RHP9	1530 aa		28.12	■■■□□ 2.09
CIRBP-240	ENST00000592815	NUP160	Q12769	1436 aa		28.09	■■■□□ 2.09
CIRBP-240	ENST00000592815	CEP170	Q5SW79	1584 aa		28.07	■■■□□ 2.08
CIRBP-240	ENST00000592815	ERCC6L2	Q5T890	1561 aa		27.99	■■■□□ 2.07
CIRBP-240	ENST00000592815	JPH4	Q96JJ6	628 aa		27.93	■■■□□ 2.06
CIRBP-240	ENST00000592815	IGF1R	P08069	1367 aa		27.92	■■■□□ 2.06
CIRBP-240	ENST00000592815	KIF27	Q86VH2	1401 aa		27.92	■■■□□ 2.06
CIRBP-240	ENST00000592815	SHROOM2	Q13796	1616 aa		27.89	■■■□□ 2.05
CIRBP-240	ENST00000592815	PRG4	Q92954	1404 aa	Predicted RBP	27.88	■■■□□ 2.05

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