RNA–Protein interactions for RNA: ENST00000399408.6

ABCC1-201, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5 BASIC

Gene ABCC1, Length 6,594 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-201ENST00000399408 DCAF8L2P0C7V8 631 aa26.68■■□□□ 1.86
ABCC1-201ENST00000399408 NISCHQ9Y2I1 1504 aa26.14■■□□□ 1.78
ABCC1-201ENST00000399408 SUPT5HO00267 1087 aaKnown RBP25.46■■□□□ 1.67
ABCC1-201ENST00000399408 SHROOM4Q9ULL8 1493 aa25.09■■□□□ 1.61
ABCC1-201ENST00000399408 EHMT2Q96KQ7 1210 aa24.43■■□□□ 1.5
ABCC1-201ENST00000399408 APLP2Q06481 763 aa24.06■■□□□ 1.44
ABCC1-201ENST00000399408 FAM9AQ8IZU1 332 aaPredicted RBP23.96■■□□□ 1.43
ABCC1-201ENST00000399408 PELP1Q8IZL8 1130 aaKnown RBP23.71■■□□□ 1.39
ABCC1-201ENST00000399408 PCGF6Q9BYE7 350 aa23.7■■□□□ 1.38
ABCC1-201ENST00000399408 TRIM41Q8WV44 630 aa23.64■■□□□ 1.37
ABCC1-201ENST00000399408 TTBK1Q5TCY1 1321 aaPredicted RBP23.62■■□□□ 1.37
ABCC1-201ENST00000399408 RANGAP1P46060 587 aaPredicted RBP23.41■■□□□ 1.34
ABCC1-201ENST00000399408 ZEB1P37275 1124 aaPredicted RBP23.36■■□□□ 1.33
ABCC1-201ENST00000399408 UBTFP17480 764 aaKnown RBP23.28■■□□□ 1.32
ABCC1-201ENST00000399408 CCER1Q8TC90 406 aaPredicted RBP23.26■■□□□ 1.31
ABCC1-201ENST00000399408 ATP1B4Q9UN42 357 aaPredicted RBP23.18■■□□□ 1.3
ABCC1-201ENST00000399408 CENPBP07199 599 aaPredicted RBP23.11■■□□□ 1.29
ABCC1-201ENST00000399408 PPARGC1BQ86YN6 1023 aaKnown RBP22.83■■□□□ 1.25
ABCC1-201ENST00000399408 TRIM26Q12899 539 aaPredicted RBP22.83■■□□□ 1.24
ABCC1-201ENST00000399408 CHIC1Q5VXU3 224 aa22.77■■□□□ 1.24
ABCC1-201ENST00000399408 ERICH6Q7L0X2 663 aa22.64■■□□□ 1.22
ABCC1-201ENST00000399408 LOC105371045A0A1W2PR82 267 aa22.64■■□□□ 1.21
ABCC1-201ENST00000399408 YTHDC1Q96MU7 727 aaKnown RBP22.61■■□□□ 1.21
ABCC1-201ENST00000399408 NEFLP07196 543 aa22.58■■□□□ 1.21
ABCC1-201ENST00000399408 HRCP23327 699 aa22.55■■□□□ 1.2
ABCC1-201ENST00000399408 ITGAEP38570 1179 aa22.46■■□□□ 1.19
ABCC1-201ENST00000399408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.4■■□□□ 1.18
ABCC1-201ENST00000399408 HNRNPUL2Q1KMD3 747 aaKnown RBP22.4■■□□□ 1.18
ABCC1-201ENST00000399408 ABCC9O60706 1549 aa22.35■■□□□ 1.17
ABCC1-201ENST00000399408 PABPN1Q86U42 306 aaKnown RBP eCLIP22.22■■□□□ 1.15
ABCC1-201ENST00000399408 MYT1LQ9UL68 1186 aa22.22■■□□□ 1.15
ABCC1-201ENST00000399408 POLR3GLQ9BT43 218 aa22.14■■□□□ 1.14
ABCC1-201ENST00000399408 FAM50AQ14320 339 aaKnown RBP21.96■■□□□ 1.11
ABCC1-201ENST00000399408 MYT1Q01538 1121 aa21.94■■□□□ 1.1
ABCC1-201ENST00000399408 DIEXFQ68CQ4 756 aaKnown RBP21.92■■□□□ 1.1
ABCC1-201ENST00000399408 CNGB1Q14028 1251 aaPredicted RBP21.88■■□□□ 1.09
ABCC1-201ENST00000399408 TRIM52Q96A61 297 aa21.81■■□□□ 1.08
ABCC1-201ENST00000399408 DAXXQ9UER7 740 aaPredicted RBP21.79■■□□□ 1.08
ABCC1-201ENST00000399408 NEUROD1Q13562 356 aa21.72■■□□□ 1.07
ABCC1-201ENST00000399408 CSRNP3Q8WYN3 585 aa21.7■■□□□ 1.06
ABCC1-201ENST00000399408 SLC4A1APQ9BWU0 796 aaKnown RBP21.68■■□□□ 1.06
ABCC1-201ENST00000399408 ZCCHC6Q5VYS8 1495 aaKnown RBP21.67■■□□□ 1.06
ABCC1-201ENST00000399408 FBLN2P98095 1184 aa21.58■■□□□ 1.04
ABCC1-201ENST00000399408 SCRIBQ14160 1630 aa21.57■■□□□ 1.04
ABCC1-201ENST00000399408 P3H3Q8IVL6 736 aa21.51■■□□□ 1.03
ABCC1-201ENST00000399408 ANP32CO43423 234 aa21.5■■□□□ 1.03
ABCC1-201ENST00000399408 ZNF316A6NFI3 1004 aaPredicted RBP21.5■■□□□ 1.03
ABCC1-201ENST00000399408 ZNF326Q5BKZ1 582 aaKnown RBP21.5■■□□□ 1.03
ABCC1-201ENST00000399408 CLSPNQ9HAW4 1339 aa21.42■■□□□ 1.02
ABCC1-201ENST00000399408 ARID3CA6NKF2 412 aa21.38■■□□□ 1.01
ABCC1-201ENST00000399408 CCDC180Q9P1Z9 1646 aa21.37■■□□□ 1.01
ABCC1-201ENST00000399408 GTF3C3Q9Y5Q9 886 aa21.37■■□□□ 1.01
ABCC1-201ENST00000399408 BCANQ96GW7 911 aa21.31■■□□□ 1
ABCC1-201ENST00000399408 RTL5Q5HYW3 569 aaPredicted RBP21.3■■□□□ 1
ABCC1-201ENST00000399408 CDK11AQ9UQ88 783 aaPredicted RBP21.3■■□□□ 1
ABCC1-201ENST00000399408 DCAF1Q9Y4B6 1507 aa21.29■■□□□ 1
ABCC1-201ENST00000399408 ZNF777Q9ULD5 760 aaPredicted RBP21.26■□□□□ 0.99
ABCC1-201ENST00000399408 ACIN1Q9UKV3 1341 aaKnown RBP21.14■□□□□ 0.98
ABCC1-201ENST00000399408 TONSLQ96HA7 1378 aa21.11■□□□□ 0.97
ABCC1-201ENST00000399408 ZBTB47Q9UFB7 747 aaPredicted RBP21.05■□□□□ 0.96
ABCC1-201ENST00000399408 CANXP27824 592 aaKnown RBP21.04■□□□□ 0.96
ABCC1-201ENST00000399408 NEFMP07197 916 aa21.01■□□□□ 0.95
ABCC1-201ENST00000399408 RB1CC1Q8TDY2 1594 aa21.01■□□□□ 0.95
ABCC1-201ENST00000399408 RSF1Q96T23 1441 aaPredicted RBP20.99■□□□□ 0.95
ABCC1-201ENST00000399408 CLIP1P30622 1438 aa20.96■□□□□ 0.95
ABCC1-201ENST00000399408 CHIC2Q9UKJ5 165 aa20.92■□□□□ 0.94
ABCC1-201ENST00000399408 EEA1Q15075 1411 aa20.9■□□□□ 0.94
ABCC1-201ENST00000399408 DDX10Q13206 875 aaKnown RBP20.9■□□□□ 0.94
ABCC1-201ENST00000399408 MTUS2Q5JR59 1369 aa20.9■□□□□ 0.94
ABCC1-201ENST00000399408 SLC24A1O60721 1099 aa20.87■□□□□ 0.93
ABCC1-201ENST00000399408 NPM1P06748 294 aaKnown RBP eCLIP20.86■□□□□ 0.93
ABCC1-201ENST00000399408 CHGAP10645 457 aaKnown RBP20.85■□□□□ 0.93
ABCC1-201ENST00000399408 ESF1Q9H501 851 aaKnown RBP20.85■□□□□ 0.93
ABCC1-201ENST00000399408 NACADO15069 1562 aa20.84■□□□□ 0.93
ABCC1-201ENST00000399408 GOLGA3Q08378 1498 aa20.84■□□□□ 0.93
ABCC1-201ENST00000399408 HNRNPUQ00839 825 aaKnown RBP eCLIP20.83■□□□□ 0.93
ABCC1-201ENST00000399408 MYO15BQ96JP2 1530 aa20.82■□□□□ 0.92
ABCC1-201ENST00000399408 TSPY4P0CV99 314 aa20.81■□□□□ 0.92
ABCC1-201ENST00000399408 TSPY10P0CW01 314 aa20.81■□□□□ 0.92
ABCC1-201ENST00000399408 FKBP8Q14318 412 aa20.81■□□□□ 0.92
ABCC1-201ENST00000399408 ANP32AP39687 249 aaKnown RBP20.8■□□□□ 0.92
ABCC1-201ENST00000399408 CEP162Q5TB80 1403 aa20.79■□□□□ 0.92
ABCC1-201ENST00000399408 CHMP7Q8WUX9 453 aaPredicted RBP20.79■□□□□ 0.92
ABCC1-201ENST00000399408 WRNQ14191 1432 aaPredicted RBP eCLIP20.79■□□□□ 0.929e-6■■■■■ 50.1
ABCC1-201ENST00000399408 BCL11AQ9H165 835 aa20.79■□□□□ 0.92
ABCC1-201ENST00000399408 FAM9BQ8IZU0 186 aa20.78■□□□□ 0.92
ABCC1-201ENST00000399408 STAG3Q9UJ98 1225 aa20.78■□□□□ 0.92
ABCC1-201ENST00000399408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.77■□□□□ 0.921e-6■■■□□ 15.2
ABCC1-201ENST00000399408 BAZ1BQ9UIG0 1483 aaKnown RBP20.73■□□□□ 0.91
ABCC1-201ENST00000399408 TMC1Q8TDI8 760 aa20.68■□□□□ 0.9
ABCC1-201ENST00000399408 TNIKQ9UKE5 1360 aa20.67■□□□□ 0.9
ABCC1-201ENST00000399408 NPM2Q86SE8 214 aaKnown RBP20.66■□□□□ 0.9
ABCC1-201ENST00000399408 KDM2AQ9Y2K7 1162 aa20.66■□□□□ 0.9
ABCC1-201ENST00000399408 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
ABCC1-201ENST00000399408 RRP7BPQ9NSQ0 103 aa20.64■□□□□ 0.9
ABCC1-201ENST00000399408 CEP164Q9UPV0 1460 aa20.63■□□□□ 0.89
ABCC1-201ENST00000399408 MRS2Q9HD23 443 aa20.63■□□□□ 0.89
ABCC1-201ENST00000399408 MIER1Q8N108 512 aa20.62■□□□□ 0.89
ABCC1-201ENST00000399408 SALL2Q9Y467 1007 aaPredicted RBP20.62■□□□□ 0.89
ABCC1-201ENST00000399408 EIF4G2P78344 907 aaKnown RBP eCLIP20.6■□□□□ 0.891e-6■■■■■ 42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms