RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 NISCHQ9Y2I1 1504 aa35.8■■■■□ 3.32
HDLBP-247ENST00000498595 CCDC180Q9P1Z9 1646 aa32.05■■■□□ 2.72
HDLBP-247ENST00000498595 ABCC9O60706 1549 aa31.92■■■□□ 2.7
HDLBP-247ENST00000498595 RB1CC1Q8TDY2 1594 aa30.48■■■□□ 2.47
HDLBP-247ENST00000498595 NACADO15069 1562 aa30.3■■■□□ 2.44
HDLBP-247ENST00000498595 DCAF8L2P0C7V8 631 aa30.28■■■□□ 2.44
HDLBP-247ENST00000498595 MYO15BQ96JP2 1530 aa29.91■■■□□ 2.38
HDLBP-247ENST00000498595 PABPN1Q86U42 306 aaKnown RBP eCLIP29.75■■■□□ 2.35
HDLBP-247ENST00000498595 ZCCHC6Q5VYS8 1495 aaKnown RBP29.7■■■□□ 2.35
HDLBP-247ENST00000498595 DNAJC5BQ9UF47 199 aa29.7■■■□□ 2.35
HDLBP-247ENST00000498595 UNC13AQ9UPW8 1703 aa29.62■■■□□ 2.33
HDLBP-247ENST00000498595 DCAF1Q9Y4B6 1507 aa29.59■■■□□ 2.33
HDLBP-247ENST00000498595 BICRAQ9NZM4 1560 aa29.47■■■□□ 2.31
HDLBP-247ENST00000498595 SCRIBQ14160 1630 aa29.23■■■□□ 2.27
HDLBP-247ENST00000498595 SHROOM4Q9ULL8 1493 aa29.22■■■□□ 2.27
HDLBP-247ENST00000498595 CC2D2AQ9P2K1 1620 aa28.8■■■□□ 2.2
HDLBP-247ENST00000498595 EIF4G1Q04637 1599 aaKnown RBP28.8■■■□□ 2.2
HDLBP-247ENST00000498595 CECR2Q9BXF3 1484 aa28.75■■■□□ 2.19
HDLBP-247ENST00000498595 NCAPD3P42695 1498 aa27.95■■■□□ 2.07
HDLBP-247ENST00000498595 ATAD2BQ9ULI0 1458 aa27.89■■■□□ 2.05
HDLBP-247ENST00000498595 SMARCA4P51532 1647 aa27.88■■■□□ 2.05
HDLBP-247ENST00000498595 SMARCA2P51531 1590 aa27.86■■■□□ 2.05
HDLBP-247ENST00000498595 BAZ1AQ9NRL2 1556 aaPredicted RBP27.82■■■□□ 2.04
HDLBP-247ENST00000498595 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
HDLBP-247ENST00000498595 BAZ1BQ9UIG0 1483 aaKnown RBP27.68■■■□□ 2.02
HDLBP-247ENST00000498595 ERCC6Q03468 1493 aa27.64■■■□□ 2.01
HDLBP-247ENST00000498595 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
HDLBP-247ENST00000498595 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
HDLBP-247ENST00000498595 CUX2O14529 1486 aa27.47■■□□□ 1.99
HDLBP-247ENST00000498595 NESP48681 1621 aa27.41■■□□□ 1.98
HDLBP-247ENST00000498595 LAMC3Q9Y6N6 1575 aa27.31■■□□□ 1.96
HDLBP-247ENST00000498595 DNAJC5Q9H3Z4 198 aa27.25■■□□□ 1.95
HDLBP-247ENST00000498595 WIZO95785 1651 aa27.22■■□□□ 1.95
HDLBP-247ENST00000498595 PDS5BQ9NTI5 1447 aa27.21■■□□□ 1.95
HDLBP-247ENST00000498595 CADPSQ9ULU8 1353 aa27.14■■□□□ 1.94
HDLBP-247ENST00000498595 THOC2Q8NI27 1593 aaKnown RBP27.09■■□□□ 1.93
HDLBP-247ENST00000498595 RSF1Q96T23 1441 aaPredicted RBP27.08■■□□□ 1.93
HDLBP-247ENST00000498595 KIF21AQ7Z4S6 1674 aa27.05■■□□□ 1.92
HDLBP-247ENST00000498595 TOP2AP11388 1531 aaKnown RBP26.95■■□□□ 1.9
HDLBP-247ENST00000498595 MRC2Q9UBG0 1479 aa26.93■■□□□ 1.9
HDLBP-247ENST00000498595 CEP164Q9UPV0 1460 aa26.87■■□□□ 1.89
HDLBP-247ENST00000498595 CFTRP13569 1480 aa26.84■■□□□ 1.89
HDLBP-247ENST00000498595 FANCD2Q9BXW9 1451 aa26.83■■□□□ 1.89
HDLBP-247ENST00000498595 WDR62O43379 1518 aa26.8■■□□□ 1.88
HDLBP-247ENST00000498595 CCDC88BA6NC98 1476 aa26.63■■□□□ 1.85
HDLBP-247ENST00000498595 URB2Q14146 1524 aaKnown RBP26.55■■□□□ 1.84
HDLBP-247ENST00000498595 PRDM2Q13029 1718 aa26.51■■□□□ 1.83
HDLBP-247ENST00000498595 ABCC8Q09428 1581 aa26.34■■□□□ 1.81
HDLBP-247ENST00000498595 IFT140Q96RY7 1462 aa26.32■■□□□ 1.8
HDLBP-247ENST00000498595 TOPBP1Q92547 1522 aa26.31■■□□□ 1.8
HDLBP-247ENST00000498595 OSCARQ8IYS5 282 aa26.29■■□□□ 1.8
HDLBP-247ENST00000498595 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
HDLBP-247ENST00000498595 TRIM41Q8WV44 630 aa26.2■■□□□ 1.78
HDLBP-247ENST00000498595 ZNF608Q9ULD9 1512 aaPredicted RBP26.19■■□□□ 1.78
HDLBP-247ENST00000498595 SUPT5HO00267 1087 aaKnown RBP26.1■■□□□ 1.77
HDLBP-247ENST00000498595 EIF4G3O43432 1585 aaKnown RBP26.07■■□□□ 1.76
HDLBP-247ENST00000498595 POLA1P09884 1462 aaPredicted RBP26.05■■□□□ 1.76
HDLBP-247ENST00000498595 TARBP1Q13395 1621 aaKnown RBP26.02■■□□□ 1.76
HDLBP-247ENST00000498595 AQRO60306 1485 aaKnown RBP eCLIP26■■□□□ 1.754e-9■■■■■ 32.2
HDLBP-247ENST00000498595 SOGA1O94964 1423 aa25.98■■□□□ 1.75
HDLBP-247ENST00000498595 RAD54L2Q9Y4B4 1467 aa25.94■■□□□ 1.74
HDLBP-247ENST00000498595 FGD5Q6ZNL6 1462 aa25.92■■□□□ 1.74
HDLBP-247ENST00000498595 FBLN2P98095 1184 aa25.91■■□□□ 1.74
HDLBP-247ENST00000498595 CUX1P39880 1505 aa25.89■■□□□ 1.74
HDLBP-247ENST00000498595 TDRD9Q8NDG6 1382 aaKnown RBP25.89■■□□□ 1.74
HDLBP-247ENST00000498595 WDR97A6NE52 1622 aa25.85■■□□□ 1.73
HDLBP-247ENST00000498595 RIMBP3CA6NJZ7 1639 aa25.82■■□□□ 1.72
HDLBP-247ENST00000498595 RIMBP3BA6NNM3 1639 aa25.82■■□□□ 1.72
HDLBP-247ENST00000498595 RIMBP3Q9UFD9 1639 aa25.82■■□□□ 1.72
HDLBP-247ENST00000498595 CHD1O14646 1710 aa25.8■■□□□ 1.72
HDLBP-247ENST00000498595 ARHGEF11O15085 1522 aa25.79■■□□□ 1.72
HDLBP-247ENST00000498595 SNAPC4Q5SXM2 1469 aa25.76■■□□□ 1.71
HDLBP-247ENST00000498595 GRIN2BQ13224 1484 aa25.75■■□□□ 1.71
HDLBP-247ENST00000498595 CHMP7Q8WUX9 453 aaPredicted RBP25.74■■□□□ 1.71
HDLBP-247ENST00000498595 MAGI1Q96QZ7 1491 aaPredicted RBP25.72■■□□□ 1.71
HDLBP-247ENST00000498595 GAPVD1Q14C86 1478 aa25.66■■□□□ 1.7
HDLBP-247ENST00000498595 CYB5RLQ6IPT4 315 aa25.65■■□□□ 1.7
HDLBP-247ENST00000498595 ABCA10Q8WWZ4 1543 aa25.64■■□□□ 1.7
HDLBP-247ENST00000498595 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.69
HDLBP-247ENST00000498595 SYNJ2O15056 1496 aa25.63■■□□□ 1.69
HDLBP-247ENST00000498595 SYNJ1O43426 1573 aa25.61■■□□□ 1.69
HDLBP-247ENST00000498595 PBRM1Q86U86 1689 aa25.57■■□□□ 1.68
HDLBP-247ENST00000498595 ABCA5Q8WWZ7 1642 aa25.55■■□□□ 1.68
HDLBP-247ENST00000498595 TOP2BQ02880 1626 aa25.54■■□□□ 1.68
HDLBP-247ENST00000498595 CLASP1Q7Z460 1538 aa25.53■■□□□ 1.68
HDLBP-247ENST00000498595 ARAP1Q96P48 1450 aa25.53■■□□□ 1.68
HDLBP-247ENST00000498595 BIVM-ERCC5R4GMW8 1640 aa25.52■■□□□ 1.68
HDLBP-247ENST00000498595 GRIN2AQ12879 1464 aa25.39■■□□□ 1.65
HDLBP-247ENST00000498595 TRHP20396 242 aaPredicted RBP25.38■■□□□ 1.65
HDLBP-247ENST00000498595 FHAD1B1AJZ9 1412 aa25.37■■□□□ 1.65
HDLBP-247ENST00000498595 ADAMTS12P58397 1594 aa25.36■■□□□ 1.65
HDLBP-247ENST00000498595 ERICH3Q5RHP9 1530 aa25.34■■□□□ 1.65
HDLBP-247ENST00000498595 NUP160Q12769 1436 aa25.28■■□□□ 1.64
HDLBP-247ENST00000498595 CEP170Q5SW79 1584 aa25.23■■□□□ 1.63
HDLBP-247ENST00000498595 KIF27Q86VH2 1401 aa25.14■■□□□ 1.62
HDLBP-247ENST00000498595 ERCC6L2Q5T890 1561 aa25.11■■□□□ 1.61
HDLBP-247ENST00000498595 SHROOM2Q13796 1616 aa25.1■■□□□ 1.61
HDLBP-247ENST00000498595 JPH4Q96JJ6 628 aa25.07■■□□□ 1.6
HDLBP-247ENST00000498595 PRG4Q92954 1404 aaPredicted RBP25.06■■□□□ 1.6
HDLBP-247ENST00000498595 IGF1RP08069 1367 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms