RNA–Protein interactions for RNA: ENST00000596287.5

C19orf48-205, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-205ENST00000596287 NISCHQ9Y2I1 1504 aa28.92■■■□□ 2.22
C19orf48-205ENST00000596287 CCDC180Q9P1Z9 1646 aa25.88■■□□□ 1.73
C19orf48-205ENST00000596287 ABCC9O60706 1549 aa25.75■■□□□ 1.71
C19orf48-205ENST00000596287 RB1CC1Q8TDY2 1594 aa24.52■■□□□ 1.52
C19orf48-205ENST00000596287 NACADO15069 1562 aa24.37■■□□□ 1.49
C19orf48-205ENST00000596287 DNAJC5BQ9UF47 199 aa24.36■■□□□ 1.49
C19orf48-205ENST00000596287 DCAF8L2P0C7V8 631 aa24.29■■□□□ 1.48
C19orf48-205ENST00000596287 UNC13AQ9UPW8 1703 aa24.1■■□□□ 1.45
C19orf48-205ENST00000596287 MYO15BQ96JP2 1530 aa24.06■■□□□ 1.44
C19orf48-205ENST00000596287 ZCCHC6Q5VYS8 1495 aaKnown RBP24.03■■□□□ 1.44
C19orf48-205ENST00000596287 PABPN1Q86U42 306 aaKnown RBP eCLIP23.97■■□□□ 1.43
C19orf48-205ENST00000596287 BICRAQ9NZM4 1560 aa23.89■■□□□ 1.41
C19orf48-205ENST00000596287 DCAF1Q9Y4B6 1507 aa23.84■■□□□ 1.41
C19orf48-205ENST00000596287 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
C19orf48-205ENST00000596287 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
C19orf48-205ENST00000596287 CC2D2AQ9P2K1 1620 aa23.26■■□□□ 1.31
C19orf48-205ENST00000596287 EIF4G1Q04637 1599 aaKnown RBP23.24■■□□□ 1.31
C19orf48-205ENST00000596287 CECR2Q9BXF3 1484 aa23.13■■□□□ 1.29
C19orf48-205ENST00000596287 DNAJC5Q9H3Z4 198 aa22.9■■□□□ 1.26
C19orf48-205ENST00000596287 SMARCA4P51532 1647 aa22.56■■□□□ 1.2
C19orf48-205ENST00000596287 NCAPD3P42695 1498 aa22.5■■□□□ 1.19
C19orf48-205ENST00000596287 ATAD2BQ9ULI0 1458 aa22.49■■□□□ 1.19
C19orf48-205ENST00000596287 CUX2O14529 1486 aa22.42■■□□□ 1.18
C19orf48-205ENST00000596287 BAZ1AQ9NRL2 1556 aaPredicted RBP22.42■■□□□ 1.18
C19orf48-205ENST00000596287 SMARCA2P51531 1590 aa22.41■■□□□ 1.18
C19orf48-205ENST00000596287 HMGXB3Q12766 1538 aa22.37■■□□□ 1.17
C19orf48-205ENST00000596287 MROH2BQ7Z745 1585 aa22.34■■□□□ 1.17
C19orf48-205ENST00000596287 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
C19orf48-205ENST00000596287 BAZ1BQ9UIG0 1483 aaKnown RBP22.28■■□□□ 1.16
C19orf48-205ENST00000596287 NESP48681 1621 aa22.2■■□□□ 1.15
C19orf48-205ENST00000596287 ERCC6Q03468 1493 aa22.15■■□□□ 1.14
C19orf48-205ENST00000596287 WIZO95785 1651 aa22.11■■□□□ 1.13
C19orf48-205ENST00000596287 LAMC3Q9Y6N6 1575 aa21.98■■□□□ 1.11
C19orf48-205ENST00000596287 THOC2Q8NI27 1593 aaKnown RBP21.94■■□□□ 1.1
C19orf48-205ENST00000596287 KIF21AQ7Z4S6 1674 aa21.93■■□□□ 1.1
C19orf48-205ENST00000596287 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.1
C19orf48-205ENST00000596287 CADPSQ9ULU8 1353 aa21.82■■□□□ 1.08
C19orf48-205ENST00000596287 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
C19orf48-205ENST00000596287 TOP2AP11388 1531 aaKnown RBP21.78■■□□□ 1.08
C19orf48-205ENST00000596287 MRC2Q9UBG0 1479 aa21.66■■□□□ 1.06
C19orf48-205ENST00000596287 WDR62O43379 1518 aa21.63■■□□□ 1.05
C19orf48-205ENST00000596287 CFTRP13569 1480 aa21.63■■□□□ 1.05
C19orf48-205ENST00000596287 FANCD2Q9BXW9 1451 aa21.61■■□□□ 1.05
C19orf48-205ENST00000596287 CEP164Q9UPV0 1460 aa21.61■■□□□ 1.05
C19orf48-205ENST00000596287 CCDC88BA6NC98 1476 aa21.53■■□□□ 1.04
C19orf48-205ENST00000596287 TRIM41Q8WV44 630 aa21.51■■□□□ 1.03
C19orf48-205ENST00000596287 PRDM2Q13029 1718 aa21.5■■□□□ 1.03
C19orf48-205ENST00000596287 URB2Q14146 1524 aaKnown RBP21.47■■□□□ 1.03
C19orf48-205ENST00000596287 TOPBP1Q92547 1522 aa21.24■□□□□ 0.99
C19orf48-205ENST00000596287 OSCARQ8IYS5 282 aa21.2■□□□□ 0.98
C19orf48-205ENST00000596287 ZNF608Q9ULD9 1512 aaPredicted RBP21.19■□□□□ 0.98
C19orf48-205ENST00000596287 DNMBPQ6XZF7 1577 aa21.18■□□□□ 0.98
C19orf48-205ENST00000596287 IFT140Q96RY7 1462 aa21.15■□□□□ 0.98
C19orf48-205ENST00000596287 ABCC8Q09428 1581 aa21.1■□□□□ 0.97
C19orf48-205ENST00000596287 EIF4G3O43432 1585 aaKnown RBP21.08■□□□□ 0.97
C19orf48-205ENST00000596287 TARBP1Q13395 1621 aaKnown RBP21.07■□□□□ 0.96
C19orf48-205ENST00000596287 SUPT5HO00267 1087 aaKnown RBP21.06■□□□□ 0.96
C19orf48-205ENST00000596287 POLA1P09884 1462 aaPredicted RBP21.04■□□□□ 0.96
C19orf48-205ENST00000596287 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
C19orf48-205ENST00000596287 AQRO60306 1485 aaKnown RBP eCLIP20.98■□□□□ 0.95not detected■■■■□ 26.1
C19orf48-205ENST00000596287 CUX1P39880 1505 aa20.98■□□□□ 0.95
C19orf48-205ENST00000596287 RIMBP3CA6NJZ7 1639 aa20.96■□□□□ 0.95
C19orf48-205ENST00000596287 RIMBP3BA6NNM3 1639 aa20.96■□□□□ 0.95
C19orf48-205ENST00000596287 RIMBP3Q9UFD9 1639 aa20.96■□□□□ 0.95
C19orf48-205ENST00000596287 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
C19orf48-205ENST00000596287 CHD1O14646 1710 aa20.91■□□□□ 0.94
C19orf48-205ENST00000596287 SOGA1O94964 1423 aa20.9■□□□□ 0.94
C19orf48-205ENST00000596287 TDRD9Q8NDG6 1382 aaKnown RBP20.87■□□□□ 0.93
C19orf48-205ENST00000596287 ARHGEF11O15085 1522 aa20.87■□□□□ 0.93
C19orf48-205ENST00000596287 WDR97A6NE52 1622 aa20.83■□□□□ 0.93
C19orf48-205ENST00000596287 SNAPC4Q5SXM2 1469 aa20.79■□□□□ 0.92
C19orf48-205ENST00000596287 FBLN2P98095 1184 aa20.76■□□□□ 0.91
C19orf48-205ENST00000596287 PBRM1Q86U86 1689 aa20.73■□□□□ 0.91
C19orf48-205ENST00000596287 GRIN2BQ13224 1484 aa20.7■□□□□ 0.9
C19orf48-205ENST00000596287 SYNJ1O43426 1573 aa20.69■□□□□ 0.9
C19orf48-205ENST00000596287 ABCA5Q8WWZ7 1642 aa20.69■□□□□ 0.9
C19orf48-205ENST00000596287 BIVM-ERCC5R4GMW8 1640 aa20.68■□□□□ 0.9
C19orf48-205ENST00000596287 MAGI1Q96QZ7 1491 aaPredicted RBP20.68■□□□□ 0.9
C19orf48-205ENST00000596287 ABCA10Q8WWZ4 1543 aa20.68■□□□□ 0.9
C19orf48-205ENST00000596287 GAPVD1Q14C86 1478 aa20.66■□□□□ 0.9
C19orf48-205ENST00000596287 TOP2BQ02880 1626 aa20.66■□□□□ 0.9
C19orf48-205ENST00000596287 CLASP1Q7Z460 1538 aa20.64■□□□□ 0.9
C19orf48-205ENST00000596287 CYB5RLQ6IPT4 315 aa20.64■□□□□ 0.89
C19orf48-205ENST00000596287 WRNQ14191 1432 aaPredicted RBP eCLIP20.62■□□□□ 0.89
C19orf48-205ENST00000596287 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
C19orf48-205ENST00000596287 ARAP1Q96P48 1450 aa20.61■□□□□ 0.89
C19orf48-205ENST00000596287 CHMP7Q8WUX9 453 aaPredicted RBP20.59■□□□□ 0.89
C19orf48-205ENST00000596287 TRHP20396 242 aaPredicted RBP20.57■□□□□ 0.88
C19orf48-205ENST00000596287 ADAMTS12P58397 1594 aa20.53■□□□□ 0.88
C19orf48-205ENST00000596287 GRIN2AQ12879 1464 aa20.46■□□□□ 0.87
C19orf48-205ENST00000596287 CEP170Q5SW79 1584 aa20.44■□□□□ 0.86
C19orf48-205ENST00000596287 AEBP2Q6ZN18 517 aaPredicted RBP20.41■□□□□ 0.86
C19orf48-205ENST00000596287 ERICH3Q5RHP9 1530 aa20.41■□□□□ 0.86
C19orf48-205ENST00000596287 ERCC6L2Q5T890 1561 aa20.4■□□□□ 0.86
C19orf48-205ENST00000596287 FHAD1B1AJZ9 1412 aa20.39■□□□□ 0.85
C19orf48-205ENST00000596287 NUP160Q12769 1436 aa20.37■□□□□ 0.85
C19orf48-205ENST00000596287 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
C19orf48-205ENST00000596287 RUSC2Q8N2Y8 1516 aa20.24■□□□□ 0.83
C19orf48-205ENST00000596287 KIF27Q86VH2 1401 aa20.19■□□□□ 0.82
C19orf48-205ENST00000596287 IGF1RP08069 1367 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms