RNA–Protein interactions for RNA: ENST00000600818.1

SUPT5H-218, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-218ENST00000600818 NISCHQ9Y2I1 1504 aa33.24■■■□□ 2.91
SUPT5H-218ENST00000600818 CCDC180Q9P1Z9 1646 aa29.63■■■□□ 2.33
SUPT5H-218ENST00000600818 ABCC9O60706 1549 aa28.89■■■□□ 2.22
SUPT5H-218ENST00000600818 RB1CC1Q8TDY2 1594 aa27.86■■■□□ 2.05
SUPT5H-218ENST00000600818 NACADO15069 1562 aa27.84■■■□□ 2.05
SUPT5H-218ENST00000600818 MYO15BQ96JP2 1530 aa27.72■■■□□ 2.03
SUPT5H-218ENST00000600818 ZCCHC6Q5VYS8 1495 aaKnown RBP27.7■■■□□ 2.03
SUPT5H-218ENST00000600818 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
SUPT5H-218ENST00000600818 DCAF8L2P0C7V8 631 aa27.56■■■□□ 2
SUPT5H-218ENST00000600818 UNC13AQ9UPW8 1703 aa27.27■■□□□ 1.96
SUPT5H-218ENST00000600818 BICRAQ9NZM4 1560 aa27.05■■□□□ 1.92
SUPT5H-218ENST00000600818 PABPN1Q86U42 306 aaKnown RBP eCLIP26.93■■□□□ 1.92e-10■■□□□ 12.7
SUPT5H-218ENST00000600818 SCRIBQ14160 1630 aa26.92■■□□□ 1.9
SUPT5H-218ENST00000600818 SHROOM4Q9ULL8 1493 aa26.81■■□□□ 1.88
SUPT5H-218ENST00000600818 DNAJC5BQ9UF47 199 aa26.56■■□□□ 1.84
SUPT5H-218ENST00000600818 EIF4G1Q04637 1599 aaKnown RBP26.31■■□□□ 1.8
SUPT5H-218ENST00000600818 CC2D2AQ9P2K1 1620 aa26.2■■□□□ 1.78
SUPT5H-218ENST00000600818 CECR2Q9BXF3 1484 aa26■■□□□ 1.75
SUPT5H-218ENST00000600818 SMARCA4P51532 1647 aa25.81■■□□□ 1.72
SUPT5H-218ENST00000600818 BAZ1AQ9NRL2 1556 aaPredicted RBP25.77■■□□□ 1.72
SUPT5H-218ENST00000600818 NCAPD3P42695 1498 aa25.69■■□□□ 1.7
SUPT5H-218ENST00000600818 ATAD2BQ9ULI0 1458 aa25.66■■□□□ 1.7
SUPT5H-218ENST00000600818 SMARCA2P51531 1590 aa25.65■■□□□ 1.7
SUPT5H-218ENST00000600818 PEG3Q9GZU2 1588 aa25.62■■□□□ 1.69
SUPT5H-218ENST00000600818 MROH2BQ7Z745 1585 aa25.59■■□□□ 1.69
SUPT5H-218ENST00000600818 HMGXB3Q12766 1538 aa25.58■■□□□ 1.68
SUPT5H-218ENST00000600818 BAZ1BQ9UIG0 1483 aaKnown RBP25.42■■□□□ 1.66
SUPT5H-218ENST00000600818 WIZO95785 1651 aa25.31■■□□□ 1.64
SUPT5H-218ENST00000600818 RSF1Q96T23 1441 aaPredicted RBP25.28■■□□□ 1.64
SUPT5H-218ENST00000600818 TOP2AP11388 1531 aaKnown RBP25.07■■□□□ 1.6
SUPT5H-218ENST00000600818 LAMC3Q9Y6N6 1575 aa25.01■■□□□ 1.59
SUPT5H-218ENST00000600818 NESP48681 1621 aa25.01■■□□□ 1.59
SUPT5H-218ENST00000600818 ERCC6Q03468 1493 aa24.89■■□□□ 1.58
SUPT5H-218ENST00000600818 CADPSQ9ULU8 1353 aa24.89■■□□□ 1.57
SUPT5H-218ENST00000600818 PDS5BQ9NTI5 1447 aa24.79■■□□□ 1.56
SUPT5H-218ENST00000600818 KIF21AQ7Z4S6 1674 aa24.77■■□□□ 1.56
SUPT5H-218ENST00000600818 CFTRP13569 1480 aa24.77■■□□□ 1.56
SUPT5H-218ENST00000600818 CUX2O14529 1486 aa24.75■■□□□ 1.55
SUPT5H-218ENST00000600818 CCDC88BA6NC98 1476 aa24.74■■□□□ 1.55
SUPT5H-218ENST00000600818 THOC2Q8NI27 1593 aaKnown RBP24.72■■□□□ 1.55
SUPT5H-218ENST00000600818 PRDM2Q13029 1718 aa24.64■■□□□ 1.53
SUPT5H-218ENST00000600818 FANCD2Q9BXW9 1451 aa24.59■■□□□ 1.53
SUPT5H-218ENST00000600818 CEP164Q9UPV0 1460 aa24.58■■□□□ 1.52
SUPT5H-218ENST00000600818 MRC2Q9UBG0 1479 aa24.56■■□□□ 1.52
SUPT5H-218ENST00000600818 WDR62O43379 1518 aa24.52■■□□□ 1.52
SUPT5H-218ENST00000600818 SUPT5HO00267 1087 aaKnown RBP24.45■■□□□ 1.5
SUPT5H-218ENST00000600818 URB2Q14146 1524 aaKnown RBP24.37■■□□□ 1.49
SUPT5H-218ENST00000600818 ABCC8Q09428 1581 aa24.24■■□□□ 1.47
SUPT5H-218ENST00000600818 TOPBP1Q92547 1522 aa24.22■■□□□ 1.47
SUPT5H-218ENST00000600818 DNMBPQ6XZF7 1577 aa24.2■■□□□ 1.46
SUPT5H-218ENST00000600818 IFT140Q96RY7 1462 aa24.08■■□□□ 1.45
SUPT5H-218ENST00000600818 CUX1P39880 1505 aa24.01■■□□□ 1.43
SUPT5H-218ENST00000600818 POLA1P09884 1462 aaPredicted RBP24■■□□□ 1.43
SUPT5H-218ENST00000600818 TARBP1Q13395 1621 aaKnown RBP23.99■■□□□ 1.43
SUPT5H-218ENST00000600818 DNAJC5Q9H3Z4 198 aa23.98■■□□□ 1.43
SUPT5H-218ENST00000600818 ZNF608Q9ULD9 1512 aaPredicted RBP23.94■■□□□ 1.42
SUPT5H-218ENST00000600818 FGD5Q6ZNL6 1462 aa23.93■■□□□ 1.42
SUPT5H-218ENST00000600818 EIF4G3O43432 1585 aaKnown RBP23.89■■□□□ 1.41
SUPT5H-218ENST00000600818 SOGA1O94964 1423 aa23.87■■□□□ 1.41
SUPT5H-218ENST00000600818 RAD54L2Q9Y4B4 1467 aa23.86■■□□□ 1.41
SUPT5H-218ENST00000600818 WDR97A6NE52 1622 aa23.85■■□□□ 1.41
SUPT5H-218ENST00000600818 BIVM-ERCC5R4GMW8 1640 aa23.84■■□□□ 1.41
SUPT5H-218ENST00000600818 TOP2BQ02880 1626 aa23.82■■□□□ 1.4
SUPT5H-218ENST00000600818 WRNQ14191 1432 aaPredicted RBP eCLIP23.82■■□□□ 1.4
SUPT5H-218ENST00000600818 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
SUPT5H-218ENST00000600818 AQRO60306 1485 aaKnown RBP eCLIP23.78■■□□□ 1.45e-12■■□□□ 13.3
SUPT5H-218ENST00000600818 ABCA10Q8WWZ4 1543 aa23.73■■□□□ 1.39
SUPT5H-218ENST00000600818 TDRD9Q8NDG6 1382 aaKnown RBP23.71■■□□□ 1.39
SUPT5H-218ENST00000600818 ABCA5Q8WWZ7 1642 aa23.66■■□□□ 1.38
SUPT5H-218ENST00000600818 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
SUPT5H-218ENST00000600818 OSCARQ8IYS5 282 aa23.62■■□□□ 1.37
SUPT5H-218ENST00000600818 PBRM1Q86U86 1689 aa23.61■■□□□ 1.37
SUPT5H-218ENST00000600818 GAPVD1Q14C86 1478 aa23.61■■□□□ 1.37
SUPT5H-218ENST00000600818 CHD1O14646 1710 aa23.59■■□□□ 1.37
SUPT5H-218ENST00000600818 MAGI1Q96QZ7 1491 aaPredicted RBP23.59■■□□□ 1.37
SUPT5H-218ENST00000600818 SNAPC4Q5SXM2 1469 aa23.58■■□□□ 1.37
SUPT5H-218ENST00000600818 SYNJ2O15056 1496 aa23.49■■□□□ 1.35
SUPT5H-218ENST00000600818 ERICH3Q5RHP9 1530 aa23.45■■□□□ 1.34
SUPT5H-218ENST00000600818 ADAMTS12P58397 1594 aa23.42■■□□□ 1.34
SUPT5H-218ENST00000600818 FBLN2P98095 1184 aa23.4■■□□□ 1.34
SUPT5H-218ENST00000600818 CHMP7Q8WUX9 453 aaPredicted RBP23.39■■□□□ 1.33
SUPT5H-218ENST00000600818 CLASP1Q7Z460 1538 aa23.36■■□□□ 1.33
SUPT5H-218ENST00000600818 FHAD1B1AJZ9 1412 aa23.34■■□□□ 1.33
SUPT5H-218ENST00000600818 GRIN2AQ12879 1464 aa23.33■■□□□ 1.33
SUPT5H-218ENST00000600818 KIF27Q86VH2 1401 aa23.33■■□□□ 1.32
SUPT5H-218ENST00000600818 RIMBP3CA6NJZ7 1639 aa23.31■■□□□ 1.32
SUPT5H-218ENST00000600818 RIMBP3BA6NNM3 1639 aa23.31■■□□□ 1.32
SUPT5H-218ENST00000600818 RIMBP3Q9UFD9 1639 aa23.31■■□□□ 1.32
SUPT5H-218ENST00000600818 ARHGEF11O15085 1522 aa23.3■■□□□ 1.32
SUPT5H-218ENST00000600818 NUP160Q12769 1436 aa23.25■■□□□ 1.31
SUPT5H-218ENST00000600818 IGF1RP08069 1367 aa23.24■■□□□ 1.31
SUPT5H-218ENST00000600818 CUL7Q14999 1698 aa23.23■■□□□ 1.31
SUPT5H-218ENST00000600818 CEP170Q5SW79 1584 aa23.23■■□□□ 1.31
SUPT5H-218ENST00000600818 TRIM41Q8WV44 630 aa23.14■■□□□ 1.29
SUPT5H-218ENST00000600818 SHROOM2Q13796 1616 aa23.12■■□□□ 1.29
SUPT5H-218ENST00000600818 ARAP1Q96P48 1450 aa23.11■■□□□ 1.29
SUPT5H-218ENST00000600818 CARMIL1Q5VZK9 1371 aa23.08■■□□□ 1.29
SUPT5H-218ENST00000600818 RUSC2Q8N2Y8 1516 aa23.08■■□□□ 1.28
SUPT5H-218ENST00000600818 KIAA0586Q9BVV6 1533 aa23■■□□□ 1.27
SUPT5H-218ENST00000600818 CYB5RLQ6IPT4 315 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms