RNA–Protein interactions for RNA: ENST00000530306.5

EEF1D-231, Transcript of eukaryotic translation elongation factor 1 delta, human

TSL 2

Gene EEF1D, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EEF1D-231	ENST00000530306	NISCH	Q9Y2I1	1504 aa		38.99	■■■■□ 3.83
EEF1D-231	ENST00000530306	ABCC9	O60706	1549 aa		35.43	■■■■□ 3.26
EEF1D-231	ENST00000530306	CCDC180	Q9P1Z9	1646 aa		34.99	■■■■□ 3.19
EEF1D-231	ENST00000530306	DNAJC5B	Q9UF47	199 aa		33.63	■■■□□ 2.97
EEF1D-231	ENST00000530306	RB1CC1	Q8TDY2	1594 aa		33.53	■■■□□ 2.96
EEF1D-231	ENST00000530306	NACAD	O15069	1562 aa		33.26	■■■□□ 2.91
EEF1D-231	ENST00000530306	DCAF8L2	P0C7V8	631 aa		33.12	■■■□□ 2.89
EEF1D-231	ENST00000530306	PABPN1	Q86U42	306 aa	Known RBP eCLIP	33.02	■■■□□ 2.88
EEF1D-231	ENST00000530306	MYO15B	Q96JP2	1530 aa		32.73	■■■□□ 2.83
EEF1D-231	ENST00000530306	UNC13A	Q9UPW8	1703 aa		32.6	■■■□□ 2.81
EEF1D-231	ENST00000530306	BICRA	Q9NZM4	1560 aa		32.58	■■■□□ 2.81
EEF1D-231	ENST00000530306	ZCCHC6	Q5VYS8	1495 aa	Known RBP	32.23	■■■□□ 2.75
EEF1D-231	ENST00000530306	DCAF1	Q9Y4B6	1507 aa		32.18	■■■□□ 2.74
EEF1D-231	ENST00000530306	SHROOM4	Q9ULL8	1493 aa		32.15	■■■□□ 2.74
EEF1D-231	ENST00000530306	CECR2	Q9BXF3	1484 aa		31.97	■■■□□ 2.71
EEF1D-231	ENST00000530306	CC2D2A	Q9P2K1	1620 aa		31.93	■■■□□ 2.7
EEF1D-231	ENST00000530306	SCRIB	Q14160	1630 aa		31.89	■■■□□ 2.7
EEF1D-231	ENST00000530306	EIF4G1	Q04637	1599 aa	Known RBP	31.81	■■■□□ 2.68
EEF1D-231	ENST00000530306	DNAJC5	Q9H3Z4	198 aa		31.12	■■■□□ 2.57
EEF1D-231	ENST00000530306	NCAPD3	P42695	1498 aa		30.78	■■■□□ 2.52
EEF1D-231	ENST00000530306	CUX2	O14529	1486 aa		30.67	■■■□□ 2.5
EEF1D-231	ENST00000530306	ATAD2B	Q9ULI0	1458 aa		30.62	■■■□□ 2.49
EEF1D-231	ENST00000530306	ERCC6	Q03468	1493 aa		30.61	■■■□□ 2.49
EEF1D-231	ENST00000530306	SMARCA2	P51531	1590 aa		30.46	■■■□□ 2.47
EEF1D-231	ENST00000530306	HMGXB3	Q12766	1538 aa		30.43	■■■□□ 2.46
EEF1D-231	ENST00000530306	SMARCA4	P51532	1647 aa		30.4	■■■□□ 2.46
EEF1D-231	ENST00000530306	NES	P48681	1621 aa		30.34	■■■□□ 2.45
EEF1D-231	ENST00000530306	BAZ1B	Q9UIG0	1483 aa	Known RBP	30.26	■■■□□ 2.44
EEF1D-231	ENST00000530306	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	30.25	■■■□□ 2.43
EEF1D-231	ENST00000530306	PEG3	Q9GZU2	1588 aa		30.15	■■■□□ 2.42
EEF1D-231	ENST00000530306	MROH2B	Q7Z745	1585 aa		30.03	■■■□□ 2.4
EEF1D-231	ENST00000530306	LAMC3	Q9Y6N6	1575 aa		30.03	■■■□□ 2.4
EEF1D-231	ENST00000530306	THOC2	Q8NI27	1593 aa	Known RBP	30.02	■■■□□ 2.4
EEF1D-231	ENST00000530306	PDS5B	Q9NTI5	1447 aa		29.96	■■■□□ 2.39
EEF1D-231	ENST00000530306	CADPS	Q9ULU8	1353 aa		29.84	■■■□□ 2.37
EEF1D-231	ENST00000530306	KIF21A	Q7Z4S6	1674 aa		29.79	■■■□□ 2.36
EEF1D-231	ENST00000530306	MRC2	Q9UBG0	1479 aa		29.68	■■■□□ 2.34
EEF1D-231	ENST00000530306	WDR62	O43379	1518 aa		29.6	■■■□□ 2.33
EEF1D-231	ENST00000530306	WIZ	O95785	1651 aa		29.57	■■■□□ 2.32
EEF1D-231	ENST00000530306	TRIM41	Q8WV44	630 aa		29.57	■■■□□ 2.32
EEF1D-231	ENST00000530306	CEP164	Q9UPV0	1460 aa		29.48	■■■□□ 2.31
EEF1D-231	ENST00000530306	FANCD2	Q9BXW9	1451 aa		29.45	■■■□□ 2.31
EEF1D-231	ENST00000530306	CFTR	P13569	1480 aa		29.42	■■■□□ 2.3
EEF1D-231	ENST00000530306	RSF1	Q96T23	1441 aa	Predicted RBP	29.35	■■■□□ 2.29
EEF1D-231	ENST00000530306	OSCAR	Q8IYS5	282 aa		29.31	■■■□□ 2.28
EEF1D-231	ENST00000530306	TOP2A	P11388	1531 aa	Known RBP	29.23	■■■□□ 2.27
EEF1D-231	ENST00000530306	URB2	Q14146	1524 aa	Known RBP	29.22	■■■□□ 2.27
EEF1D-231	ENST00000530306	CCDC88B	A6NC98	1476 aa		28.96	■■■□□ 2.23
EEF1D-231	ENST00000530306	IFT140	Q96RY7	1462 aa		28.95	■■■□□ 2.22
EEF1D-231	ENST00000530306	ZNF608	Q9ULD9	1512 aa	Predicted RBP	28.93	■■■□□ 2.22
EEF1D-231	ENST00000530306	TOPBP1	Q92547	1522 aa		28.84	■■■□□ 2.21
EEF1D-231	ENST00000530306	PRDM2	Q13029	1718 aa		28.81	■■■□□ 2.2
EEF1D-231	ENST00000530306	RIMBP3C	A6NJZ7	1639 aa		28.8	■■■□□ 2.2
EEF1D-231	ENST00000530306	RIMBP3B	A6NNM3	1639 aa		28.8	■■■□□ 2.2
EEF1D-231	ENST00000530306	RIMBP3	Q9UFD9	1639 aa		28.8	■■■□□ 2.2
EEF1D-231	ENST00000530306	ABCC8	Q09428	1581 aa		28.78	■■■□□ 2.2
EEF1D-231	ENST00000530306	ARHGEF11	O15085	1522 aa		28.74	■■■□□ 2.19
EEF1D-231	ENST00000530306	DNMBP	Q6XZF7	1577 aa		28.67	■■■□□ 2.18
EEF1D-231	ENST00000530306	AQR	O60306	1485 aa	Known RBP eCLIP	28.66	■■■□□ 2.18	4e-11	■■■■■ 58.3
EEF1D-231	ENST00000530306	EIF4G3	O43432	1585 aa	Known RBP	28.65	■■■□□ 2.18
EEF1D-231	ENST00000530306	CYB5RL	Q6IPT4	315 aa		28.63	■■■□□ 2.17
EEF1D-231	ENST00000530306	TARBP1	Q13395	1621 aa	Known RBP	28.56	■■■□□ 2.16
EEF1D-231	ENST00000530306	FBLN2	P98095	1184 aa		28.55	■■■□□ 2.16
EEF1D-231	ENST00000530306	POLA1	P09884	1462 aa	Predicted RBP	28.54	■■■□□ 2.16
EEF1D-231	ENST00000530306	RAD54L2	Q9Y4B4	1467 aa		28.46	■■■□□ 2.15
EEF1D-231	ENST00000530306	TDRD9	Q8NDG6	1382 aa	Known RBP	28.45	■■■□□ 2.14
EEF1D-231	ENST00000530306	ARAP1	Q96P48	1450 aa		28.45	■■■□□ 2.14
EEF1D-231	ENST00000530306	SOGA1	O94964	1423 aa		28.44	■■■□□ 2.14
EEF1D-231	ENST00000530306	CHD1	O14646	1710 aa		28.42	■■■□□ 2.14
EEF1D-231	ENST00000530306	TRH	P20396	242 aa	Predicted RBP	28.39	■■■□□ 2.14
EEF1D-231	ENST00000530306	SNAPC4	Q5SXM2	1469 aa		28.3	■■■□□ 2.12
EEF1D-231	ENST00000530306	FGD5	Q6ZNL6	1462 aa		28.3	■■■□□ 2.12
EEF1D-231	ENST00000530306	CHMP7	Q8WUX9	453 aa	Predicted RBP	28.3	■■■□□ 2.12
EEF1D-231	ENST00000530306	WDR97	A6NE52	1622 aa		28.24	■■■□□ 2.11
EEF1D-231	ENST00000530306	CUX1	P39880	1505 aa		28.23	■■■□□ 2.11
EEF1D-231	ENST00000530306	MAGI1	Q96QZ7	1491 aa	Predicted RBP	28.22	■■■□□ 2.11
EEF1D-231	ENST00000530306	CLASP1	Q7Z460	1538 aa		28.21	■■■□□ 2.11
EEF1D-231	ENST00000530306	GRIN2B	Q13224	1484 aa		28.21	■■■□□ 2.11
EEF1D-231	ENST00000530306	SYNJ1	O43426	1573 aa		28.15	■■■□□ 2.1
EEF1D-231	ENST00000530306	SYNJ2	O15056	1496 aa		28.15	■■■□□ 2.1
EEF1D-231	ENST00000530306	GAPVD1	Q14C86	1478 aa		28.06	■■■□□ 2.08
EEF1D-231	ENST00000530306	ABCA10	Q8WWZ4	1543 aa		27.98	■■■□□ 2.07
EEF1D-231	ENST00000530306	ABCA5	Q8WWZ7	1642 aa		27.89	■■■□□ 2.05
EEF1D-231	ENST00000530306	PBRM1	Q86U86	1689 aa		27.88	■■■□□ 2.05
EEF1D-231	ENST00000530306	WRN	Q14191	1432 aa	Predicted RBP eCLIP	27.84	■■■□□ 2.05	2e-6	■■■□□ 18
EEF1D-231	ENST00000530306	SUPT5H	O00267	1087 aa	Known RBP	27.83	■■■□□ 2.05
EEF1D-231	ENST00000530306	GRIN2A	Q12879	1464 aa		27.83	■■■□□ 2.04
EEF1D-231	ENST00000530306	AEBP2	Q6ZN18	517 aa	Predicted RBP	27.79	■■■□□ 2.04
EEF1D-231	ENST00000530306	NUP160	Q12769	1436 aa		27.78	■■■□□ 2.04
EEF1D-231	ENST00000530306	ERCC6L2	Q5T890	1561 aa		27.75	■■■□□ 2.03
EEF1D-231	ENST00000530306	FHAD1	B1AJZ9	1412 aa		27.71	■■■□□ 2.03
EEF1D-231	ENST00000530306	ADAMTS12	P58397	1594 aa		27.71	■■■□□ 2.03
EEF1D-231	ENST00000530306	CEP170	Q5SW79	1584 aa		27.69	■■■□□ 2.02
EEF1D-231	ENST00000530306	TOP2B	Q02880	1626 aa		27.64	■■■□□ 2.02
EEF1D-231	ENST00000530306	ERICH3	Q5RHP9	1530 aa		27.6	■■■□□ 2.01
EEF1D-231	ENST00000530306	SHROOM2	Q13796	1616 aa		27.59	■■■□□ 2.01
EEF1D-231	ENST00000530306	BIVM-ERCC5	R4GMW8	1640 aa		27.59	■■■□□ 2.01
EEF1D-231	ENST00000530306	JPH4	Q96JJ6	628 aa		27.55	■■■□□ 2
EEF1D-231	ENST00000530306	PRG4	Q92954	1404 aa	Predicted RBP	27.54	■■■□□ 2
EEF1D-231	ENST00000530306	NPM1	P06748	294 aa	Known RBP eCLIP	27.35	■■□□□ 1.97

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms