RNA–Protein interactions for RNA: ENST00000447368.6

UBP1-204, Transcript of upstream binding protein 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBP1, Length 3,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-204ENST00000447368 NISCHQ9Y2I1 1504 aa24.53■■□□□ 1.52
UBP1-204ENST00000447368 SHROOM4Q9ULL8 1493 aa22■■□□□ 1.11
UBP1-204ENST00000447368 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
UBP1-204ENST00000447368 DCAF8L2P0C7V8 631 aa21.54■■□□□ 1.04
UBP1-204ENST00000447368 PPARGC1BQ86YN6 1023 aaKnown RBP20.93■□□□□ 0.94
UBP1-204ENST00000447368 HRCP23327 699 aa20.89■□□□□ 0.94
UBP1-204ENST00000447368 PCGF6Q9BYE7 350 aa20.85■□□□□ 0.93
UBP1-204ENST00000447368 CHIC1Q5VXU3 224 aa20.84■□□□□ 0.93
UBP1-204ENST00000447368 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
UBP1-204ENST00000447368 MYO15BQ96JP2 1530 aa20.61■□□□□ 0.89
UBP1-204ENST00000447368 PELP1Q8IZL8 1130 aaKnown RBP20.57■□□□□ 0.88
UBP1-204ENST00000447368 LOC105371045A0A1W2PR82 267 aa20.54■□□□□ 0.88
UBP1-204ENST00000447368 EHMT2Q96KQ7 1210 aa20.4■□□□□ 0.86
UBP1-204ENST00000447368 CCDC180Q9P1Z9 1646 aa20.36■□□□□ 0.85
UBP1-204ENST00000447368 FAM9AQ8IZU1 332 aaPredicted RBP20.28■□□□□ 0.84
UBP1-204ENST00000447368 TRIM41Q8WV44 630 aa20.09■□□□□ 0.81
UBP1-204ENST00000447368 TRIM26Q12899 539 aaPredicted RBP20.08■□□□□ 0.81
UBP1-204ENST00000447368 SCAF1Q9H7N4 1312 aaKnown RBP20.07■□□□□ 0.8
UBP1-204ENST00000447368 DCAF1Q9Y4B6 1507 aa19.94■□□□□ 0.78
UBP1-204ENST00000447368 MYT1Q01538 1121 aa19.8■□□□□ 0.76
UBP1-204ENST00000447368 TTBK1Q5TCY1 1321 aaPredicted RBP19.75■□□□□ 0.75
UBP1-204ENST00000447368 SCRIBQ14160 1630 aa19.74■□□□□ 0.75
UBP1-204ENST00000447368 ZEB1P37275 1124 aaPredicted RBP19.73■□□□□ 0.75
UBP1-204ENST00000447368 RSF1Q96T23 1441 aaPredicted RBP19.66■□□□□ 0.74
UBP1-204ENST00000447368 GTF3C3Q9Y5Q9 886 aa19.6■□□□□ 0.73
UBP1-204ENST00000447368 CCER1Q8TC90 406 aaPredicted RBP19.54■□□□□ 0.72
UBP1-204ENST00000447368 ABCC9O60706 1549 aa19.52■□□□□ 0.72
UBP1-204ENST00000447368 NEUROD1Q13562 356 aa19.52■□□□□ 0.72
UBP1-204ENST00000447368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.52■□□□□ 0.71
UBP1-204ENST00000447368 ACIN1Q9UKV3 1341 aaKnown RBP19.47■□□□□ 0.71
UBP1-204ENST00000447368 RB1CC1Q8TDY2 1594 aa19.47■□□□□ 0.71
UBP1-204ENST00000447368 YTHDC1Q96MU7 727 aaKnown RBP19.44■□□□□ 0.7
UBP1-204ENST00000447368 CENPBP07199 599 aaPredicted RBP19.42■□□□□ 0.7
UBP1-204ENST00000447368 CECR2Q9BXF3 1484 aa19.36■□□□□ 0.69
UBP1-204ENST00000447368 UBTFP17480 764 aaKnown RBP19.28■□□□□ 0.68
UBP1-204ENST00000447368 MROH2BQ7Z745 1585 aa19.21■□□□□ 0.67
UBP1-204ENST00000447368 RANGAP1P46060 587 aaPredicted RBP19.19■□□□□ 0.66
UBP1-204ENST00000447368 DIEXFQ68CQ4 756 aaKnown RBP19.16■□□□□ 0.66
UBP1-204ENST00000447368 WIZO95785 1651 aa19.09■□□□□ 0.65
UBP1-204ENST00000447368 HNRNPUL2Q1KMD3 747 aaKnown RBP19.04■□□□□ 0.64
UBP1-204ENST00000447368 NACADO15069 1562 aa19.01■□□□□ 0.63
UBP1-204ENST00000447368 PABPN1Q86U42 306 aaKnown RBP eCLIP19.01■□□□□ 0.63
UBP1-204ENST00000447368 APLP2Q06481 763 aa18.96■□□□□ 0.63
UBP1-204ENST00000447368 CSRNP3Q8WYN3 585 aa18.95■□□□□ 0.62
UBP1-204ENST00000447368 ABCC8Q09428 1581 aa18.94■□□□□ 0.62
UBP1-204ENST00000447368 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
UBP1-204ENST00000447368 CEP162Q5TB80 1403 aa18.9■□□□□ 0.62
UBP1-204ENST00000447368 SOGA1O94964 1423 aa18.89■□□□□ 0.61
UBP1-204ENST00000447368 BCL11AQ9H165 835 aa18.83■□□□□ 0.61
UBP1-204ENST00000447368 BAZ1AQ9NRL2 1556 aaPredicted RBP18.83■□□□□ 0.61
UBP1-204ENST00000447368 ZNF316A6NFI3 1004 aaPredicted RBP18.81■□□□□ 0.6
UBP1-204ENST00000447368 RUSC2Q8N2Y8 1516 aa18.74■□□□□ 0.59
UBP1-204ENST00000447368 TNIKQ9UKE5 1360 aa18.73■□□□□ 0.59
UBP1-204ENST00000447368 TOP2AP11388 1531 aaKnown RBP18.65■□□□□ 0.58
UBP1-204ENST00000447368 MIER1Q8N108 512 aa18.65■□□□□ 0.58
UBP1-204ENST00000447368 ITGAEP38570 1179 aa18.61■□□□□ 0.57
UBP1-204ENST00000447368 WRNQ14191 1432 aaPredicted RBP eCLIP18.61■□□□□ 0.57
UBP1-204ENST00000447368 GOLGA3Q08378 1498 aa18.61■□□□□ 0.57
UBP1-204ENST00000447368 SMARCA4P51532 1647 aa18.58■□□□□ 0.57
UBP1-204ENST00000447368 SMARCA2P51531 1590 aa18.58■□□□□ 0.56
UBP1-204ENST00000447368 BCANQ96GW7 911 aa18.56■□□□□ 0.56
UBP1-204ENST00000447368 CLIP1P30622 1438 aa18.56■□□□□ 0.56
UBP1-204ENST00000447368 EEA1Q15075 1411 aa18.56■□□□□ 0.56
UBP1-204ENST00000447368 ANP32EQ9BTT0 268 aa18.53■□□□□ 0.56
UBP1-204ENST00000447368 EIF4G1Q04637 1599 aaKnown RBP18.48■□□□□ 0.55
UBP1-204ENST00000447368 CEP164Q9UPV0 1460 aa18.44■□□□□ 0.54
UBP1-204ENST00000447368 ATP1B4Q9UN42 357 aaPredicted RBP18.42■□□□□ 0.54
UBP1-204ENST00000447368 VPS8Q8N3P4 1428 aa18.35■□□□□ 0.53
UBP1-204ENST00000447368 RAPGEF2Q9Y4G8 1499 aa18.34■□□□□ 0.53
UBP1-204ENST00000447368 SUPT16HQ9Y5B9 1047 aaKnown RBP18.32■□□□□ 0.52
UBP1-204ENST00000447368 TSHZ2Q9NRE2 1034 aa18.31■□□□□ 0.52
UBP1-204ENST00000447368 BAZ1BQ9UIG0 1483 aaKnown RBP18.3■□□□□ 0.52
UBP1-204ENST00000447368 KANK4Q5T7N3 995 aaPredicted RBP18.29■□□□□ 0.52
UBP1-204ENST00000447368 SYNJ1O43426 1573 aa18.28■□□□□ 0.52
UBP1-204ENST00000447368 ERICH6Q7L0X2 663 aa18.27■□□□□ 0.51
UBP1-204ENST00000447368 UNC13AQ9UPW8 1703 aa18.22■□□□□ 0.51
UBP1-204ENST00000447368 FAM50AQ14320 339 aaKnown RBP18.2■□□□□ 0.5
UBP1-204ENST00000447368 P3H3Q8IVL6 736 aa18.19■□□□□ 0.5
UBP1-204ENST00000447368 ATAD2BQ9ULI0 1458 aa18.19■□□□□ 0.5
UBP1-204ENST00000447368 PRKCSHP14314 528 aaPredicted RBP18.18■□□□□ 0.5
UBP1-204ENST00000447368 KIF21BO75037 1637 aa18.13■□□□□ 0.49
UBP1-204ENST00000447368 DHX57Q6P158 1386 aaKnown RBP18.13■□□□□ 0.49
UBP1-204ENST00000447368 FKBP8Q14318 412 aa18.11■□□□□ 0.49
UBP1-204ENST00000447368 BICRAQ9NZM4 1560 aa18.09■□□□□ 0.49
UBP1-204ENST00000447368 HIRIP3Q9BW71 556 aaPredicted RBP18.09■□□□□ 0.49
UBP1-204ENST00000447368 DDX10Q13206 875 aaKnown RBP18.07■□□□□ 0.48
UBP1-204ENST00000447368 NEFLP07196 543 aa18.06■□□□□ 0.48
UBP1-204ENST00000447368 KCNH8Q96L42 1107 aa18.04■□□□□ 0.48
UBP1-204ENST00000447368 CLSPNQ9HAW4 1339 aa18.03■□□□□ 0.48
UBP1-204ENST00000447368 KIF27Q86VH2 1401 aa18.03■□□□□ 0.48
UBP1-204ENST00000447368 CCNB3Q8WWL7 1395 aa18.02■□□□□ 0.48
UBP1-204ENST00000447368 SIN3AQ96ST3 1273 aa18.02■□□□□ 0.47
UBP1-204ENST00000447368 ARAP1Q96P48 1450 aa17.98■□□□□ 0.47
UBP1-204ENST00000447368 RBM19Q9Y4C8 960 aaKnown RBP17.96■□□□□ 0.47
UBP1-204ENST00000447368 RAB3GAP2Q9H2M9 1393 aa17.93■□□□□ 0.46
UBP1-204ENST00000447368 TRIM52Q96A61 297 aa17.92■□□□□ 0.46
UBP1-204ENST00000447368 PEG3Q9GZU2 1588 aa17.91■□□□□ 0.46
UBP1-204ENST00000447368 TOP2BQ02880 1626 aa17.9■□□□□ 0.46
UBP1-204ENST00000447368 PRXQ9BXM0 1461 aa17.9■□□□□ 0.46
UBP1-204ENST00000447368 CUX2O14529 1486 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms