RNA–Protein interactions for RNA: ENST00000531953.5

EEF1D-242, Transcript of eukaryotic translation elongation factor 1 delta, humanhuman

TSL 4

Gene EEF1D, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEF1D-242ENST00000531953 NISCHQ9Y2I1 1504 aa30.83■■■□□ 2.53
EEF1D-242ENST00000531953 CCDC180Q9P1Z9 1646 aa27.54■■■□□ 2
EEF1D-242ENST00000531953 ABCC9O60706 1549 aa27.36■■□□□ 1.97
EEF1D-242ENST00000531953 RB1CC1Q8TDY2 1594 aa26.12■■□□□ 1.77
EEF1D-242ENST00000531953 NACADO15069 1562 aa26■■□□□ 1.75
EEF1D-242ENST00000531953 DCAF8L2P0C7V8 631 aa25.92■■□□□ 1.74
EEF1D-242ENST00000531953 MYO15BQ96JP2 1530 aa25.74■■□□□ 1.71
EEF1D-242ENST00000531953 ZCCHC6Q5VYS8 1495 aaKnown RBP25.6■■□□□ 1.69
EEF1D-242ENST00000531953 DNAJC5BQ9UF47 199 aa25.55■■□□□ 1.68
EEF1D-242ENST00000531953 PABPN1Q86U42 306 aaKnown RBP eCLIP25.53■■□□□ 1.68
EEF1D-242ENST00000531953 UNC13AQ9UPW8 1703 aa25.5■■□□□ 1.67
EEF1D-242ENST00000531953 DCAF1Q9Y4B6 1507 aa25.48■■□□□ 1.67
EEF1D-242ENST00000531953 BICRAQ9NZM4 1560 aa25.39■■□□□ 1.65
EEF1D-242ENST00000531953 SCRIBQ14160 1630 aa25.11■■□□□ 1.61
EEF1D-242ENST00000531953 SHROOM4Q9ULL8 1493 aa25.05■■□□□ 1.6
EEF1D-242ENST00000531953 EIF4G1Q04637 1599 aaKnown RBP24.73■■□□□ 1.55
EEF1D-242ENST00000531953 CC2D2AQ9P2K1 1620 aa24.72■■□□□ 1.55
EEF1D-242ENST00000531953 CECR2Q9BXF3 1484 aa24.64■■□□□ 1.53
EEF1D-242ENST00000531953 NCAPD3P42695 1498 aa24.04■■□□□ 1.44
EEF1D-242ENST00000531953 ATAD2BQ9ULI0 1458 aa23.98■■□□□ 1.43
EEF1D-242ENST00000531953 SMARCA4P51532 1647 aa23.98■■□□□ 1.43
EEF1D-242ENST00000531953 SMARCA2P51531 1590 aa23.9■■□□□ 1.42
EEF1D-242ENST00000531953 BAZ1AQ9NRL2 1556 aaPredicted RBP23.9■■□□□ 1.42
EEF1D-242ENST00000531953 HMGXB3Q12766 1538 aa23.84■■□□□ 1.41
EEF1D-242ENST00000531953 PEG3Q9GZU2 1588 aa23.77■■□□□ 1.4
EEF1D-242ENST00000531953 MROH2BQ7Z745 1585 aa23.76■■□□□ 1.39
EEF1D-242ENST00000531953 BAZ1BQ9UIG0 1483 aaKnown RBP23.74■■□□□ 1.39
EEF1D-242ENST00000531953 ERCC6Q03468 1493 aa23.59■■□□□ 1.37
EEF1D-242ENST00000531953 NESP48681 1621 aa23.58■■□□□ 1.36
EEF1D-242ENST00000531953 CUX2O14529 1486 aa23.49■■□□□ 1.35
EEF1D-242ENST00000531953 WIZO95785 1651 aa23.46■■□□□ 1.35
EEF1D-242ENST00000531953 LAMC3Q9Y6N6 1575 aa23.43■■□□□ 1.34
EEF1D-242ENST00000531953 RSF1Q96T23 1441 aaPredicted RBP23.36■■□□□ 1.33
EEF1D-242ENST00000531953 CADPSQ9ULU8 1353 aa23.31■■□□□ 1.32
EEF1D-242ENST00000531953 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
EEF1D-242ENST00000531953 DNAJC5Q9H3Z4 198 aa23.29■■□□□ 1.32
EEF1D-242ENST00000531953 THOC2Q8NI27 1593 aaKnown RBP23.27■■□□□ 1.32
EEF1D-242ENST00000531953 KIF21AQ7Z4S6 1674 aa23.24■■□□□ 1.31
EEF1D-242ENST00000531953 TOP2AP11388 1531 aaKnown RBP23.19■■□□□ 1.3
EEF1D-242ENST00000531953 CFTRP13569 1480 aa23.09■■□□□ 1.29
EEF1D-242ENST00000531953 MRC2Q9UBG0 1479 aa23.08■■□□□ 1.29
EEF1D-242ENST00000531953 FANCD2Q9BXW9 1451 aa23.03■■□□□ 1.28
EEF1D-242ENST00000531953 CEP164Q9UPV0 1460 aa23.02■■□□□ 1.28
EEF1D-242ENST00000531953 WDR62O43379 1518 aa23.02■■□□□ 1.28
EEF1D-242ENST00000531953 CCDC88BA6NC98 1476 aa22.95■■□□□ 1.26
EEF1D-242ENST00000531953 URB2Q14146 1524 aaKnown RBP22.83■■□□□ 1.25
EEF1D-242ENST00000531953 PRDM2Q13029 1718 aa22.79■■□□□ 1.24
EEF1D-242ENST00000531953 TOPBP1Q92547 1522 aa22.62■■□□□ 1.21
EEF1D-242ENST00000531953 ABCC8Q09428 1581 aa22.58■■□□□ 1.2
EEF1D-242ENST00000531953 IFT140Q96RY7 1462 aa22.57■■□□□ 1.2
EEF1D-242ENST00000531953 DNMBPQ6XZF7 1577 aa22.55■■□□□ 1.2
EEF1D-242ENST00000531953 ZNF608Q9ULD9 1512 aaPredicted RBP22.52■■□□□ 1.2
EEF1D-242ENST00000531953 OSCARQ8IYS5 282 aa22.48■■□□□ 1.19
EEF1D-242ENST00000531953 SUPT5HO00267 1087 aaKnown RBP22.46■■□□□ 1.19
EEF1D-242ENST00000531953 POLA1P09884 1462 aaPredicted RBP22.41■■□□□ 1.18
EEF1D-242ENST00000531953 TARBP1Q13395 1621 aaKnown RBP22.39■■□□□ 1.18
EEF1D-242ENST00000531953 EIF4G3O43432 1585 aaKnown RBP22.38■■□□□ 1.17
EEF1D-242ENST00000531953 AQRO60306 1485 aaKnown RBP eCLIP22.34■■□□□ 1.178e-7■□□□□ 11.3
EEF1D-242ENST00000531953 RAD54L2Q9Y4B4 1467 aa22.33■■□□□ 1.16
EEF1D-242ENST00000531953 SOGA1O94964 1423 aa22.31■■□□□ 1.16
EEF1D-242ENST00000531953 TRIM41Q8WV44 630 aa22.31■■□□□ 1.16
EEF1D-242ENST00000531953 CUX1P39880 1505 aa22.31■■□□□ 1.16
EEF1D-242ENST00000531953 FGD5Q6ZNL6 1462 aa22.28■■□□□ 1.16
EEF1D-242ENST00000531953 TDRD9Q8NDG6 1382 aaKnown RBP22.25■■□□□ 1.15
EEF1D-242ENST00000531953 WDR97A6NE52 1622 aa22.17■■□□□ 1.14
EEF1D-242ENST00000531953 CHD1O14646 1710 aa22.15■■□□□ 1.14
EEF1D-242ENST00000531953 FBLN2P98095 1184 aa22.14■■□□□ 1.13
EEF1D-242ENST00000531953 RIMBP3CA6NJZ7 1639 aa22.13■■□□□ 1.13
EEF1D-242ENST00000531953 RIMBP3BA6NNM3 1639 aa22.13■■□□□ 1.13
EEF1D-242ENST00000531953 RIMBP3Q9UFD9 1639 aa22.13■■□□□ 1.13
EEF1D-242ENST00000531953 SNAPC4Q5SXM2 1469 aa22.11■■□□□ 1.13
EEF1D-242ENST00000531953 ARHGEF11O15085 1522 aa22.1■■□□□ 1.13
EEF1D-242ENST00000531953 GRIN2BQ13224 1484 aa22.09■■□□□ 1.13
EEF1D-242ENST00000531953 MAGI1Q96QZ7 1491 aaPredicted RBP22.06■■□□□ 1.12
EEF1D-242ENST00000531953 ABCA10Q8WWZ4 1543 aa22.06■■□□□ 1.12
EEF1D-242ENST00000531953 CHMP7Q8WUX9 453 aaPredicted RBP22.03■■□□□ 1.12
EEF1D-242ENST00000531953 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
EEF1D-242ENST00000531953 WRNQ14191 1432 aaPredicted RBP eCLIP22.01■■□□□ 1.112e-6■■■□□ 18
EEF1D-242ENST00000531953 TOP2BQ02880 1626 aa21.99■■□□□ 1.11
EEF1D-242ENST00000531953 SYNJ2O15056 1496 aa21.99■■□□□ 1.11
EEF1D-242ENST00000531953 ABCA5Q8WWZ7 1642 aa21.98■■□□□ 1.11
EEF1D-242ENST00000531953 SYNJ1O43426 1573 aa21.98■■□□□ 1.11
EEF1D-242ENST00000531953 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
EEF1D-242ENST00000531953 PBRM1Q86U86 1689 aa21.97■■□□□ 1.11
EEF1D-242ENST00000531953 CLASP1Q7Z460 1538 aa21.95■■□□□ 1.1
EEF1D-242ENST00000531953 CYB5RLQ6IPT4 315 aa21.94■■□□□ 1.1
EEF1D-242ENST00000531953 ARAP1Q96P48 1450 aa21.9■■□□□ 1.1
EEF1D-242ENST00000531953 ADAMTS12P58397 1594 aa21.8■■□□□ 1.08
EEF1D-242ENST00000531953 GRIN2AQ12879 1464 aa21.8■■□□□ 1.08
EEF1D-242ENST00000531953 ERICH3Q5RHP9 1530 aa21.77■■□□□ 1.08
EEF1D-242ENST00000531953 FHAD1B1AJZ9 1412 aa21.77■■□□□ 1.08
EEF1D-242ENST00000531953 NUP160Q12769 1436 aa21.73■■□□□ 1.07
EEF1D-242ENST00000531953 CEP170Q5SW79 1584 aa21.71■■□□□ 1.07
EEF1D-242ENST00000531953 ERCC6L2Q5T890 1561 aa21.63■■□□□ 1.05
EEF1D-242ENST00000531953 TRHP20396 242 aaPredicted RBP21.61■■□□□ 1.05
EEF1D-242ENST00000531953 SHROOM2Q13796 1616 aa21.59■■□□□ 1.05
EEF1D-242ENST00000531953 KIF27Q86VH2 1401 aa21.58■■□□□ 1.05
EEF1D-242ENST00000531953 IGF1RP08069 1367 aa21.58■■□□□ 1.04
EEF1D-242ENST00000531953 JPH4Q96JJ6 628 aa21.52■■□□□ 1.04
EEF1D-242ENST00000531953 PRG4Q92954 1404 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms