RNA–Protein interactions for RNA: ENST00000534475.5

EEF1D-254, Transcript of eukaryotic translation elongation factor 1 delta, humanhuman

TSL 4

Gene EEF1D, Length 538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEF1D-254ENST00000534475 NISCHQ9Y2I1 1504 aa31.06■■■□□ 2.56
EEF1D-254ENST00000534475 CCDC180Q9P1Z9 1646 aa27.7■■■□□ 2.03
EEF1D-254ENST00000534475 ABCC9O60706 1549 aa27.36■■□□□ 1.97
EEF1D-254ENST00000534475 RB1CC1Q8TDY2 1594 aa26.2■■□□□ 1.78
EEF1D-254ENST00000534475 NACADO15069 1562 aa26.11■■□□□ 1.77
EEF1D-254ENST00000534475 DCAF8L2P0C7V8 631 aa25.97■■□□□ 1.75
EEF1D-254ENST00000534475 MYO15BQ96JP2 1530 aa25.89■■□□□ 1.74
EEF1D-254ENST00000534475 ZCCHC6Q5VYS8 1495 aaKnown RBP25.84■■□□□ 1.73
EEF1D-254ENST00000534475 DCAF1Q9Y4B6 1507 aa25.69■■□□□ 1.7
EEF1D-254ENST00000534475 UNC13AQ9UPW8 1703 aa25.57■■□□□ 1.68
EEF1D-254ENST00000534475 PABPN1Q86U42 306 aaKnown RBP eCLIP25.51■■□□□ 1.67
EEF1D-254ENST00000534475 BICRAQ9NZM4 1560 aa25.45■■□□□ 1.66
EEF1D-254ENST00000534475 DNAJC5BQ9UF47 199 aa25.36■■□□□ 1.65
EEF1D-254ENST00000534475 SCRIBQ14160 1630 aa25.26■■□□□ 1.63
EEF1D-254ENST00000534475 SHROOM4Q9ULL8 1493 aa25.15■■□□□ 1.62
EEF1D-254ENST00000534475 EIF4G1Q04637 1599 aaKnown RBP24.79■■□□□ 1.56
EEF1D-254ENST00000534475 CC2D2AQ9P2K1 1620 aa24.73■■□□□ 1.55
EEF1D-254ENST00000534475 CECR2Q9BXF3 1484 aa24.62■■□□□ 1.53
EEF1D-254ENST00000534475 SMARCA4P51532 1647 aa24.14■■□□□ 1.46
EEF1D-254ENST00000534475 NCAPD3P42695 1498 aa24.12■■□□□ 1.45
EEF1D-254ENST00000534475 ATAD2BQ9ULI0 1458 aa24.09■■□□□ 1.45
EEF1D-254ENST00000534475 BAZ1AQ9NRL2 1556 aaPredicted RBP24.08■■□□□ 1.44
EEF1D-254ENST00000534475 SMARCA2P51531 1590 aa24.03■■□□□ 1.44
EEF1D-254ENST00000534475 HMGXB3Q12766 1538 aa23.97■■□□□ 1.43
EEF1D-254ENST00000534475 MROH2BQ7Z745 1585 aa23.94■■□□□ 1.42
EEF1D-254ENST00000534475 PEG3Q9GZU2 1588 aa23.93■■□□□ 1.42
EEF1D-254ENST00000534475 BAZ1BQ9UIG0 1483 aaKnown RBP23.86■■□□□ 1.41
EEF1D-254ENST00000534475 WIZO95785 1651 aa23.64■■□□□ 1.38
EEF1D-254ENST00000534475 NESP48681 1621 aa23.62■■□□□ 1.37
EEF1D-254ENST00000534475 ERCC6Q03468 1493 aa23.58■■□□□ 1.37
EEF1D-254ENST00000534475 RSF1Q96T23 1441 aaPredicted RBP23.57■■□□□ 1.36
EEF1D-254ENST00000534475 LAMC3Q9Y6N6 1575 aa23.5■■□□□ 1.35
EEF1D-254ENST00000534475 CUX2O14529 1486 aa23.44■■□□□ 1.34
EEF1D-254ENST00000534475 TOP2AP11388 1531 aaKnown RBP23.39■■□□□ 1.34
EEF1D-254ENST00000534475 CADPSQ9ULU8 1353 aa23.39■■□□□ 1.33
EEF1D-254ENST00000534475 PDS5BQ9NTI5 1447 aa23.34■■□□□ 1.33
EEF1D-254ENST00000534475 THOC2Q8NI27 1593 aaKnown RBP23.32■■□□□ 1.32
EEF1D-254ENST00000534475 KIF21AQ7Z4S6 1674 aa23.29■■□□□ 1.32
EEF1D-254ENST00000534475 CFTRP13569 1480 aa23.21■■□□□ 1.31
EEF1D-254ENST00000534475 MRC2Q9UBG0 1479 aa23.14■■□□□ 1.29
EEF1D-254ENST00000534475 FANCD2Q9BXW9 1451 aa23.12■■□□□ 1.29
EEF1D-254ENST00000534475 CCDC88BA6NC98 1476 aa23.11■■□□□ 1.29
EEF1D-254ENST00000534475 CEP164Q9UPV0 1460 aa23.11■■□□□ 1.29
EEF1D-254ENST00000534475 WDR62O43379 1518 aa23.08■■□□□ 1.29
EEF1D-254ENST00000534475 DNAJC5Q9H3Z4 198 aa23.02■■□□□ 1.28
EEF1D-254ENST00000534475 PRDM2Q13029 1718 aa22.94■■□□□ 1.26
EEF1D-254ENST00000534475 URB2Q14146 1524 aaKnown RBP22.92■■□□□ 1.26
EEF1D-254ENST00000534475 SUPT5HO00267 1087 aaKnown RBP22.73■■□□□ 1.23
EEF1D-254ENST00000534475 TOPBP1Q92547 1522 aa22.72■■□□□ 1.23
EEF1D-254ENST00000534475 ABCC8Q09428 1581 aa22.68■■□□□ 1.22
EEF1D-254ENST00000534475 DNMBPQ6XZF7 1577 aa22.67■■□□□ 1.22
EEF1D-254ENST00000534475 IFT140Q96RY7 1462 aa22.64■■□□□ 1.21
EEF1D-254ENST00000534475 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
EEF1D-254ENST00000534475 POLA1P09884 1462 aaPredicted RBP22.53■■□□□ 1.2
EEF1D-254ENST00000534475 TARBP1Q13395 1621 aaKnown RBP22.5■■□□□ 1.19
EEF1D-254ENST00000534475 CUX1P39880 1505 aa22.47■■□□□ 1.19
EEF1D-254ENST00000534475 EIF4G3O43432 1585 aaKnown RBP22.46■■□□□ 1.19
EEF1D-254ENST00000534475 FGD5Q6ZNL6 1462 aa22.43■■□□□ 1.18
EEF1D-254ENST00000534475 RAD54L2Q9Y4B4 1467 aa22.42■■□□□ 1.18
EEF1D-254ENST00000534475 SOGA1O94964 1423 aa22.4■■□□□ 1.18
EEF1D-254ENST00000534475 AQRO60306 1485 aaKnown RBP eCLIP22.4■■□□□ 1.184e-11■■■■■ 58.3
EEF1D-254ENST00000534475 OSCARQ8IYS5 282 aa22.39■■□□□ 1.17
EEF1D-254ENST00000534475 TDRD9Q8NDG6 1382 aaKnown RBP22.32■■□□□ 1.16
EEF1D-254ENST00000534475 WDR97A6NE52 1622 aa22.29■■□□□ 1.16
EEF1D-254ENST00000534475 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.152e-6■■■□□ 18
EEF1D-254ENST00000534475 SNAPC4Q5SXM2 1469 aa22.2■■□□□ 1.14
EEF1D-254ENST00000534475 ABCA10Q8WWZ4 1543 aa22.2■■□□□ 1.14
EEF1D-254ENST00000534475 TOP2BQ02880 1626 aa22.2■■□□□ 1.14
EEF1D-254ENST00000534475 CHD1O14646 1710 aa22.2■■□□□ 1.14
EEF1D-254ENST00000534475 SYNJ1O43426 1573 aa22.19■■□□□ 1.14
EEF1D-254ENST00000534475 BIVM-ERCC5R4GMW8 1640 aa22.19■■□□□ 1.14
EEF1D-254ENST00000534475 GRIN2BQ13224 1484 aa22.18■■□□□ 1.14
EEF1D-254ENST00000534475 MAGI1Q96QZ7 1491 aaPredicted RBP22.15■■□□□ 1.14
EEF1D-254ENST00000534475 FBLN2P98095 1184 aa22.14■■□□□ 1.13
EEF1D-254ENST00000534475 GAPVD1Q14C86 1478 aa22.14■■□□□ 1.13
EEF1D-254ENST00000534475 ABCA5Q8WWZ7 1642 aa22.13■■□□□ 1.13
EEF1D-254ENST00000534475 TRIM41Q8WV44 630 aa22.12■■□□□ 1.13
EEF1D-254ENST00000534475 RIMBP3CA6NJZ7 1639 aa22.09■■□□□ 1.13
EEF1D-254ENST00000534475 RIMBP3BA6NNM3 1639 aa22.09■■□□□ 1.13
EEF1D-254ENST00000534475 RIMBP3Q9UFD9 1639 aa22.09■■□□□ 1.13
EEF1D-254ENST00000534475 PBRM1Q86U86 1689 aa22.09■■□□□ 1.13
EEF1D-254ENST00000534475 ARHGEF11O15085 1522 aa22.08■■□□□ 1.13
EEF1D-254ENST00000534475 SYNJ2O15056 1496 aa22.08■■□□□ 1.12
EEF1D-254ENST00000534475 CHMP7Q8WUX9 453 aaPredicted RBP22.05■■□□□ 1.12
EEF1D-254ENST00000534475 CLASP1Q7Z460 1538 aa22.01■■□□□ 1.11
EEF1D-254ENST00000534475 ADAMTS12P58397 1594 aa21.95■■□□□ 1.1
EEF1D-254ENST00000534475 ERICH3Q5RHP9 1530 aa21.92■■□□□ 1.1
EEF1D-254ENST00000534475 GRIN2AQ12879 1464 aa21.9■■□□□ 1.1
EEF1D-254ENST00000534475 ARAP1Q96P48 1450 aa21.9■■□□□ 1.1
EEF1D-254ENST00000534475 FHAD1B1AJZ9 1412 aa21.89■■□□□ 1.09
EEF1D-254ENST00000534475 CYB5RLQ6IPT4 315 aa21.84■■□□□ 1.09
EEF1D-254ENST00000534475 NUP160Q12769 1436 aa21.83■■□□□ 1.09
EEF1D-254ENST00000534475 CEP170Q5SW79 1584 aa21.82■■□□□ 1.08
EEF1D-254ENST00000534475 KIF27Q86VH2 1401 aa21.76■■□□□ 1.07
EEF1D-254ENST00000534475 IGF1RP08069 1367 aa21.73■■□□□ 1.07
EEF1D-254ENST00000534475 SHROOM2Q13796 1616 aa21.69■■□□□ 1.06
EEF1D-254ENST00000534475 ERCC6L2Q5T890 1561 aa21.68■■□□□ 1.06
EEF1D-254ENST00000534475 CUL7Q14999 1698 aa21.66■■□□□ 1.06
EEF1D-254ENST00000534475 RUSC2Q8N2Y8 1516 aa21.64■■□□□ 1.05
EEF1D-254ENST00000534475 CARMIL1Q5VZK9 1371 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms