RNA–Protein interactions for RNA: ENST00000528303.5

EEF1D-220, Transcript of eukaryotic translation elongation factor 1 delta, humanhuman

TSL 4

Gene EEF1D, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEF1D-220ENST00000528303 NISCHQ9Y2I1 1504 aa32.31■■■□□ 2.76
EEF1D-220ENST00000528303 ABCC9O60706 1549 aa29.1■■■□□ 2.25
EEF1D-220ENST00000528303 CCDC180Q9P1Z9 1646 aa29.05■■■□□ 2.24
EEF1D-220ENST00000528303 RB1CC1Q8TDY2 1594 aa27.73■■■□□ 2.03
EEF1D-220ENST00000528303 NACADO15069 1562 aa27.53■■■□□ 2
EEF1D-220ENST00000528303 DNAJC5BQ9UF47 199 aa27.38■■□□□ 1.97
EEF1D-220ENST00000528303 DCAF8L2P0C7V8 631 aa27.35■■□□□ 1.97
EEF1D-220ENST00000528303 MYO15BQ96JP2 1530 aa27.15■■□□□ 1.94
EEF1D-220ENST00000528303 PABPN1Q86U42 306 aaKnown RBP eCLIP27.09■■□□□ 1.93
EEF1D-220ENST00000528303 UNC13AQ9UPW8 1703 aa27■■□□□ 1.91
EEF1D-220ENST00000528303 BICRAQ9NZM4 1560 aa26.84■■□□□ 1.89
EEF1D-220ENST00000528303 DCAF1Q9Y4B6 1507 aa26.74■■□□□ 1.87
EEF1D-220ENST00000528303 ZCCHC6Q5VYS8 1495 aaKnown RBP26.74■■□□□ 1.87
EEF1D-220ENST00000528303 SHROOM4Q9ULL8 1493 aa26.6■■□□□ 1.85
EEF1D-220ENST00000528303 SCRIBQ14160 1630 aa26.38■■□□□ 1.81
EEF1D-220ENST00000528303 CC2D2AQ9P2K1 1620 aa26.29■■□□□ 1.8
EEF1D-220ENST00000528303 CECR2Q9BXF3 1484 aa26.26■■□□□ 1.79
EEF1D-220ENST00000528303 EIF4G1Q04637 1599 aaKnown RBP26.21■■□□□ 1.79
EEF1D-220ENST00000528303 NCAPD3P42695 1498 aa25.41■■□□□ 1.66
EEF1D-220ENST00000528303 DNAJC5Q9H3Z4 198 aa25.33■■□□□ 1.65
EEF1D-220ENST00000528303 ATAD2BQ9ULI0 1458 aa25.28■■□□□ 1.64
EEF1D-220ENST00000528303 SMARCA2P51531 1590 aa25.24■■□□□ 1.63
EEF1D-220ENST00000528303 CUX2O14529 1486 aa25.21■■□□□ 1.63
EEF1D-220ENST00000528303 SMARCA4P51532 1647 aa25.2■■□□□ 1.62
EEF1D-220ENST00000528303 HMGXB3Q12766 1538 aa25.18■■□□□ 1.62
EEF1D-220ENST00000528303 ERCC6Q03468 1493 aa25.18■■□□□ 1.62
EEF1D-220ENST00000528303 BAZ1AQ9NRL2 1556 aaPredicted RBP25.11■■□□□ 1.61
EEF1D-220ENST00000528303 BAZ1BQ9UIG0 1483 aaKnown RBP25.03■■□□□ 1.6
EEF1D-220ENST00000528303 PEG3Q9GZU2 1588 aa25■■□□□ 1.59
EEF1D-220ENST00000528303 NESP48681 1621 aa24.94■■□□□ 1.58
EEF1D-220ENST00000528303 MROH2BQ7Z745 1585 aa24.84■■□□□ 1.57
EEF1D-220ENST00000528303 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
EEF1D-220ENST00000528303 PDS5BQ9NTI5 1447 aa24.75■■□□□ 1.55
EEF1D-220ENST00000528303 THOC2Q8NI27 1593 aaKnown RBP24.71■■□□□ 1.55
EEF1D-220ENST00000528303 CADPSQ9ULU8 1353 aa24.64■■□□□ 1.53
EEF1D-220ENST00000528303 KIF21AQ7Z4S6 1674 aa24.62■■□□□ 1.53
EEF1D-220ENST00000528303 WIZO95785 1651 aa24.53■■□□□ 1.52
EEF1D-220ENST00000528303 MRC2Q9UBG0 1479 aa24.48■■□□□ 1.51
EEF1D-220ENST00000528303 WDR62O43379 1518 aa24.4■■□□□ 1.5
EEF1D-220ENST00000528303 CEP164Q9UPV0 1460 aa24.36■■□□□ 1.49
EEF1D-220ENST00000528303 RSF1Q96T23 1441 aaPredicted RBP24.33■■□□□ 1.49
EEF1D-220ENST00000528303 CFTRP13569 1480 aa24.32■■□□□ 1.48
EEF1D-220ENST00000528303 FANCD2Q9BXW9 1451 aa24.32■■□□□ 1.48
EEF1D-220ENST00000528303 TOP2AP11388 1531 aaKnown RBP24.26■■□□□ 1.47
EEF1D-220ENST00000528303 TRIM41Q8WV44 630 aa24.11■■□□□ 1.45
EEF1D-220ENST00000528303 OSCARQ8IYS5 282 aa24.09■■□□□ 1.45
EEF1D-220ENST00000528303 URB2Q14146 1524 aaKnown RBP24.08■■□□□ 1.45
EEF1D-220ENST00000528303 PRDM2Q13029 1718 aa24.04■■□□□ 1.44
EEF1D-220ENST00000528303 CCDC88BA6NC98 1476 aa23.99■■□□□ 1.43
EEF1D-220ENST00000528303 IFT140Q96RY7 1462 aa23.91■■□□□ 1.42
EEF1D-220ENST00000528303 ABCC8Q09428 1581 aa23.89■■□□□ 1.41
EEF1D-220ENST00000528303 TOPBP1Q92547 1522 aa23.84■■□□□ 1.41
EEF1D-220ENST00000528303 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
EEF1D-220ENST00000528303 DNMBPQ6XZF7 1577 aa23.74■■□□□ 1.39
EEF1D-220ENST00000528303 RIMBP3CA6NJZ7 1639 aa23.66■■□□□ 1.38
EEF1D-220ENST00000528303 RIMBP3BA6NNM3 1639 aa23.66■■□□□ 1.38
EEF1D-220ENST00000528303 RIMBP3Q9UFD9 1639 aa23.66■■□□□ 1.38
EEF1D-220ENST00000528303 EIF4G3O43432 1585 aaKnown RBP23.65■■□□□ 1.38
EEF1D-220ENST00000528303 TARBP1Q13395 1621 aaKnown RBP23.61■■□□□ 1.37
EEF1D-220ENST00000528303 AQRO60306 1485 aaKnown RBP eCLIP23.6■■□□□ 1.374e-11■■■■■ 58.3
EEF1D-220ENST00000528303 ARHGEF11O15085 1522 aa23.59■■□□□ 1.37
EEF1D-220ENST00000528303 POLA1P09884 1462 aaPredicted RBP23.57■■□□□ 1.36
EEF1D-220ENST00000528303 SOGA1O94964 1423 aa23.52■■□□□ 1.36
EEF1D-220ENST00000528303 FBLN2P98095 1184 aa23.51■■□□□ 1.35
EEF1D-220ENST00000528303 CHD1O14646 1710 aa23.5■■□□□ 1.35
EEF1D-220ENST00000528303 CYB5RLQ6IPT4 315 aa23.48■■□□□ 1.35
EEF1D-220ENST00000528303 RAD54L2Q9Y4B4 1467 aa23.47■■□□□ 1.35
EEF1D-220ENST00000528303 WDR97A6NE52 1622 aa23.46■■□□□ 1.35
EEF1D-220ENST00000528303 TDRD9Q8NDG6 1382 aaKnown RBP23.44■■□□□ 1.34
EEF1D-220ENST00000528303 FGD5Q6ZNL6 1462 aa23.41■■□□□ 1.34
EEF1D-220ENST00000528303 CHMP7Q8WUX9 453 aaPredicted RBP23.36■■□□□ 1.33
EEF1D-220ENST00000528303 CUX1P39880 1505 aa23.35■■□□□ 1.33
EEF1D-220ENST00000528303 SNAPC4Q5SXM2 1469 aa23.34■■□□□ 1.33
EEF1D-220ENST00000528303 MAGI1Q96QZ7 1491 aaPredicted RBP23.34■■□□□ 1.33
EEF1D-220ENST00000528303 ARAP1Q96P48 1450 aa23.33■■□□□ 1.33
EEF1D-220ENST00000528303 GRIN2BQ13224 1484 aa23.32■■□□□ 1.32
EEF1D-220ENST00000528303 SYNJ1O43426 1573 aa23.28■■□□□ 1.32
EEF1D-220ENST00000528303 TRHP20396 242 aaPredicted RBP23.26■■□□□ 1.31
EEF1D-220ENST00000528303 SYNJ2O15056 1496 aa23.25■■□□□ 1.31
EEF1D-220ENST00000528303 CLASP1Q7Z460 1538 aa23.25■■□□□ 1.31
EEF1D-220ENST00000528303 GAPVD1Q14C86 1478 aa23.22■■□□□ 1.31
EEF1D-220ENST00000528303 SUPT5HO00267 1087 aaKnown RBP23.19■■□□□ 1.3
EEF1D-220ENST00000528303 ABCA10Q8WWZ4 1543 aa23.18■■□□□ 1.3
EEF1D-220ENST00000528303 PBRM1Q86U86 1689 aa23.16■■□□□ 1.3
EEF1D-220ENST00000528303 ABCA5Q8WWZ7 1642 aa23.1■■□□□ 1.29
EEF1D-220ENST00000528303 WRNQ14191 1432 aaPredicted RBP eCLIP23.09■■□□□ 1.292e-6■■■□□ 18
EEF1D-220ENST00000528303 GRIN2AQ12879 1464 aa22.99■■□□□ 1.27
EEF1D-220ENST00000528303 TOP2BQ02880 1626 aa22.98■■□□□ 1.27
EEF1D-220ENST00000528303 BIVM-ERCC5R4GMW8 1640 aa22.97■■□□□ 1.27
EEF1D-220ENST00000528303 FHAD1B1AJZ9 1412 aa22.94■■□□□ 1.26
EEF1D-220ENST00000528303 NUP160Q12769 1436 aa22.93■■□□□ 1.26
EEF1D-220ENST00000528303 ADAMTS12P58397 1594 aa22.93■■□□□ 1.26
EEF1D-220ENST00000528303 ERICH3Q5RHP9 1530 aa22.9■■□□□ 1.26
EEF1D-220ENST00000528303 CEP170Q5SW79 1584 aa22.87■■□□□ 1.25
EEF1D-220ENST00000528303 ERCC6L2Q5T890 1561 aa22.82■■□□□ 1.24
EEF1D-220ENST00000528303 SHROOM2Q13796 1616 aa22.82■■□□□ 1.24
EEF1D-220ENST00000528303 JPH4Q96JJ6 628 aa22.76■■□□□ 1.23
EEF1D-220ENST00000528303 PRG4Q92954 1404 aaPredicted RBP22.72■■□□□ 1.23
EEF1D-220ENST00000528303 AEBP2Q6ZN18 517 aaPredicted RBP22.71■■□□□ 1.23
EEF1D-220ENST00000528303 NPM1P06748 294 aaKnown RBP eCLIP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms