RNA–Protein interactions for RNA: ENST00000359632.7

HPS1-203, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 978 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-203ENST00000359632 NISCHQ9Y2I1 1504 aa32.56■■■□□ 2.8
HPS1-203ENST00000359632 ABCC9O60706 1549 aa30.55■■■□□ 2.48
HPS1-203ENST00000359632 CCDC180Q9P1Z9 1646 aa29.57■■■□□ 2.32
HPS1-203ENST00000359632 DNAJC5BQ9UF47 199 aa29.44■■■□□ 2.3
HPS1-203ENST00000359632 RB1CC1Q8TDY2 1594 aa28.62■■■□□ 2.17
HPS1-203ENST00000359632 PABPN1Q86U42 306 aaKnown RBP eCLIP28.32■■■□□ 2.12
HPS1-203ENST00000359632 NACADO15069 1562 aa28.19■■■□□ 2.1
HPS1-203ENST00000359632 DCAF8L2P0C7V8 631 aa27.97■■■□□ 2.07
HPS1-203ENST00000359632 UNC13AQ9UPW8 1703 aa27.95■■■□□ 2.07
HPS1-203ENST00000359632 BICRAQ9NZM4 1560 aa27.82■■■□□ 2.04
HPS1-203ENST00000359632 DNAJC5Q9H3Z4 198 aa27.66■■■□□ 2.02
HPS1-203ENST00000359632 CECR2Q9BXF3 1484 aa27.6■■■□□ 2.01
HPS1-203ENST00000359632 CC2D2AQ9P2K1 1620 aa27.51■■□□□ 1.99
HPS1-203ENST00000359632 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
HPS1-203ENST00000359632 SHROOM4Q9ULL8 1493 aa27.32■■□□□ 1.96
HPS1-203ENST00000359632 EIF4G1Q04637 1599 aaKnown RBP27.23■■□□□ 1.95
HPS1-203ENST00000359632 SCRIBQ14160 1630 aa26.98■■□□□ 1.91
HPS1-203ENST00000359632 ZCCHC6Q5VYS8 1495 aaKnown RBP26.81■■□□□ 1.88
HPS1-203ENST00000359632 DCAF1Q9Y4B6 1507 aa26.8■■□□□ 1.88
HPS1-203ENST00000359632 CUX2O14529 1486 aa26.65■■□□□ 1.86
HPS1-203ENST00000359632 ERCC6Q03468 1493 aa26.45■■□□□ 1.82
HPS1-203ENST00000359632 TRIM41Q8WV44 630 aa26.17■■□□□ 1.78
HPS1-203ENST00000359632 NCAPD3P42695 1498 aa26.04■■□□□ 1.76
HPS1-203ENST00000359632 NESP48681 1621 aa25.99■■□□□ 1.75
HPS1-203ENST00000359632 THOC2Q8NI27 1593 aaKnown RBP25.86■■□□□ 1.73
HPS1-203ENST00000359632 ATAD2BQ9ULI0 1458 aa25.86■■□□□ 1.73
HPS1-203ENST00000359632 HMGXB3Q12766 1538 aa25.77■■□□□ 1.72
HPS1-203ENST00000359632 SMARCA2P51531 1590 aa25.73■■□□□ 1.71
HPS1-203ENST00000359632 SMARCA4P51532 1647 aa25.6■■□□□ 1.69
HPS1-203ENST00000359632 LAMC3Q9Y6N6 1575 aa25.6■■□□□ 1.69
HPS1-203ENST00000359632 BAZ1BQ9UIG0 1483 aaKnown RBP25.59■■□□□ 1.69
HPS1-203ENST00000359632 KIF21AQ7Z4S6 1674 aa25.58■■□□□ 1.69
HPS1-203ENST00000359632 PDS5BQ9NTI5 1447 aa25.51■■□□□ 1.67
HPS1-203ENST00000359632 BAZ1AQ9NRL2 1556 aaPredicted RBP25.38■■□□□ 1.65
HPS1-203ENST00000359632 MRC2Q9UBG0 1479 aa25.35■■□□□ 1.65
HPS1-203ENST00000359632 PEG3Q9GZU2 1588 aa25.31■■□□□ 1.64
HPS1-203ENST00000359632 OSCARQ8IYS5 282 aa25.3■■□□□ 1.64
HPS1-203ENST00000359632 WDR62O43379 1518 aa25.3■■□□□ 1.64
HPS1-203ENST00000359632 CADPSQ9ULU8 1353 aa25.23■■□□□ 1.63
HPS1-203ENST00000359632 MROH2BQ7Z745 1585 aa25.11■■□□□ 1.61
HPS1-203ENST00000359632 CEP164Q9UPV0 1460 aa25.08■■□□□ 1.6
HPS1-203ENST00000359632 RIMBP3CA6NJZ7 1639 aa25.08■■□□□ 1.6
HPS1-203ENST00000359632 RIMBP3BA6NNM3 1639 aa25.08■■□□□ 1.6
HPS1-203ENST00000359632 RIMBP3Q9UFD9 1639 aa25.08■■□□□ 1.6
HPS1-203ENST00000359632 FANCD2Q9BXW9 1451 aa24.97■■□□□ 1.59
HPS1-203ENST00000359632 ARHGEF11O15085 1522 aa24.91■■□□□ 1.58
HPS1-203ENST00000359632 TRHP20396 242 aaPredicted RBP24.86■■□□□ 1.57
HPS1-203ENST00000359632 URB2Q14146 1524 aaKnown RBP24.82■■□□□ 1.56
HPS1-203ENST00000359632 CYB5RLQ6IPT4 315 aa24.8■■□□□ 1.56
HPS1-203ENST00000359632 AEBP2Q6ZN18 517 aaPredicted RBP24.78■■□□□ 1.56
HPS1-203ENST00000359632 WIZO95785 1651 aa24.76■■□□□ 1.55
HPS1-203ENST00000359632 CFTRP13569 1480 aa24.75■■□□□ 1.55
HPS1-203ENST00000359632 ZNF608Q9ULD9 1512 aaPredicted RBP24.67■■□□□ 1.54
HPS1-203ENST00000359632 ARAP1Q96P48 1450 aa24.61■■□□□ 1.53
HPS1-203ENST00000359632 IFT140Q96RY7 1462 aa24.59■■□□□ 1.53
HPS1-203ENST00000359632 EIF4G3O43432 1585 aaKnown RBP24.48■■□□□ 1.51
HPS1-203ENST00000359632 RSF1Q96T23 1441 aaPredicted RBP24.46■■□□□ 1.51
HPS1-203ENST00000359632 CHD1O14646 1710 aa24.45■■□□□ 1.5
HPS1-203ENST00000359632 FBLN2P98095 1184 aa24.4■■□□□ 1.5
HPS1-203ENST00000359632 TOPBP1Q92547 1522 aa24.39■■□□□ 1.49
HPS1-203ENST00000359632 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
HPS1-203ENST00000359632 TOP2AP11388 1531 aaKnown RBP24.37■■□□□ 1.49
HPS1-203ENST00000359632 AQRO60306 1485 aaKnown RBP eCLIP24.34■■□□□ 1.491e-6■■■□□ 19
HPS1-203ENST00000359632 ABCC8Q09428 1581 aa24.22■■□□□ 1.47
HPS1-203ENST00000359632 TARBP1Q13395 1621 aaKnown RBP24.21■■□□□ 1.47
HPS1-203ENST00000359632 DNMBPQ6XZF7 1577 aa24.2■■□□□ 1.47
HPS1-203ENST00000359632 CLASP1Q7Z460 1538 aa24.15■■□□□ 1.46
HPS1-203ENST00000359632 CCDC88BA6NC98 1476 aa24.12■■□□□ 1.45
HPS1-203ENST00000359632 POLA1P09884 1462 aaPredicted RBP24.08■■□□□ 1.45
HPS1-203ENST00000359632 SNAPC4Q5SXM2 1469 aa24.07■■□□□ 1.44
HPS1-203ENST00000359632 TDRD9Q8NDG6 1382 aaKnown RBP24.06■■□□□ 1.44
HPS1-203ENST00000359632 SYNJ1O43426 1573 aa24.06■■□□□ 1.44
HPS1-203ENST00000359632 CHMP7Q8WUX9 453 aaPredicted RBP24.04■■□□□ 1.44
HPS1-203ENST00000359632 RAD54L2Q9Y4B4 1467 aa24.04■■□□□ 1.44
HPS1-203ENST00000359632 GAPVD1Q14C86 1478 aa23.99■■□□□ 1.43
HPS1-203ENST00000359632 SOGA1O94964 1423 aa23.96■■□□□ 1.43
HPS1-203ENST00000359632 MAGI1Q96QZ7 1491 aaPredicted RBP23.93■■□□□ 1.42
HPS1-203ENST00000359632 SYNJ2O15056 1496 aa23.87■■□□□ 1.41
HPS1-203ENST00000359632 WDR97A6NE52 1622 aa23.87■■□□□ 1.41
HPS1-203ENST00000359632 GRIN2BQ13224 1484 aa23.85■■□□□ 1.41
HPS1-203ENST00000359632 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
HPS1-203ENST00000359632 ILDR1Q86SU0 546 aaPredicted RBP23.81■■□□□ 1.4
HPS1-203ENST00000359632 ERCC6L2Q5T890 1561 aa23.74■■□□□ 1.39
HPS1-203ENST00000359632 PBRM1Q86U86 1689 aa23.68■■□□□ 1.38
HPS1-203ENST00000359632 SUPT5HO00267 1087 aaKnown RBP23.68■■□□□ 1.38
HPS1-203ENST00000359632 KIF13AQ9H1H9 1805 aa23.66■■□□□ 1.38
HPS1-203ENST00000359632 CUX1P39880 1505 aa23.64■■□□□ 1.38
HPS1-203ENST00000359632 CEP170Q5SW79 1584 aa23.6■■□□□ 1.37
HPS1-203ENST00000359632 KDM4FA0A1W2PPD8 638 aa23.58■■□□□ 1.37
HPS1-203ENST00000359632 GRIN2AQ12879 1464 aa23.55■■□□□ 1.36
HPS1-203ENST00000359632 ABCA5Q8WWZ7 1642 aa23.51■■□□□ 1.35
HPS1-203ENST00000359632 FAM69CQ0P6D2 419 aa23.5■■□□□ 1.35
HPS1-203ENST00000359632 NUP160Q12769 1436 aa23.49■■□□□ 1.35
HPS1-203ENST00000359632 SHROOM2Q13796 1616 aa23.46■■□□□ 1.35
HPS1-203ENST00000359632 ABCA10Q8WWZ4 1543 aa23.46■■□□□ 1.35
HPS1-203ENST00000359632 ABCC10Q5T3U5 1492 aa23.44■■□□□ 1.34
HPS1-203ENST00000359632 ADAMTS12P58397 1594 aa23.42■■□□□ 1.34
HPS1-203ENST00000359632 KDM6BO15054 1643 aa23.41■■□□□ 1.34
HPS1-203ENST00000359632 DIP2BQ9P265 1576 aa23.36■■□□□ 1.33
HPS1-203ENST00000359632 PRG4Q92954 1404 aaPredicted RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms