RNA–Protein interactions for RNA: ENST00000638128.1

ZEB2-246, Transcript of zinc finger E-box binding homeobox 2, humanhuman

TSL 5 BASIC

Gene ZEB2, Length 8,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-246ENST00000638128 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
ZEB2-246ENST00000638128 MYT1Q01538 1121 aa18.81■□□□□ 0.6
ZEB2-246ENST00000638128 CCER1Q8TC90 406 aaPredicted RBP18.64■□□□□ 0.57
ZEB2-246ENST00000638128 YTHDC1Q96MU7 727 aaKnown RBP18.41■□□□□ 0.54
ZEB2-246ENST00000638128 ERICH6Q7L0X2 663 aa18.19■□□□□ 0.5
ZEB2-246ENST00000638128 FAM9AQ8IZU1 332 aaPredicted RBP18.09■□□□□ 0.49
ZEB2-246ENST00000638128 CENPBP07199 599 aaPredicted RBP17.71■□□□□ 0.43
ZEB2-246ENST00000638128 APLP2Q06481 763 aa17.65■□□□□ 0.42
ZEB2-246ENST00000638128 TTBK1Q5TCY1 1321 aaPredicted RBP17.64■□□□□ 0.41
ZEB2-246ENST00000638128 DCAF8L2P0C7V8 631 aa17.52■□□□□ 0.39
ZEB2-246ENST00000638128 NEFLP07196 543 aa17.5■□□□□ 0.39
ZEB2-246ENST00000638128 DAXXQ9UER7 740 aaPredicted RBP17.44■□□□□ 0.38
ZEB2-246ENST00000638128 ZEB1P37275 1124 aaPredicted RBP17.39■□□□□ 0.37
ZEB2-246ENST00000638128 CLSPNQ9HAW4 1339 aa16.99■□□□□ 0.31
ZEB2-246ENST00000638128 RTL5Q5HYW3 569 aaPredicted RBP16.9■□□□□ 0.3
ZEB2-246ENST00000638128 ZNF316A6NFI3 1004 aaPredicted RBP16.79■□□□□ 0.28
ZEB2-246ENST00000638128 GLIPR1L2Q4G1C9 344 aa16.76■□□□□ 0.27
ZEB2-246ENST00000638128 SUPT5HO00267 1087 aaKnown RBP16.6■□□□□ 0.25
ZEB2-246ENST00000638128 NEFMP07197 916 aa16.57■□□□□ 0.24
ZEB2-246ENST00000638128 ANP32BQ92688 251 aaKnown RBP16.45■□□□□ 0.22
ZEB2-246ENST00000638128 ZBTB47Q9UFB7 747 aaPredicted RBP16.45■□□□□ 0.22
ZEB2-246ENST00000638128 MYT1LQ9UL68 1186 aa16.43■□□□□ 0.22
ZEB2-246ENST00000638128 PCGF6Q9BYE7 350 aa16.31■□□□□ 0.2
ZEB2-246ENST00000638128 CDK11BP21127 795 aaKnown RBP16.15■□□□□ 0.18
ZEB2-246ENST00000638128 CDK11AQ9UQ88 783 aaPredicted RBP16.15■□□□□ 0.18
ZEB2-246ENST00000638128 TNNT2P45379 298 aaPredicted RBP16.12■□□□□ 0.17
ZEB2-246ENST00000638128 ATP1B4Q9UN42 357 aaPredicted RBP16.02■□□□□ 0.15
ZEB2-246ENST00000638128 NISCHQ9Y2I1 1504 aa15.98■□□□□ 0.15
ZEB2-246ENST00000638128 TRIM44Q96DX7 344 aaPredicted RBP15.96■□□□□ 0.15
ZEB2-246ENST00000638128 ANP32EQ9BTT0 268 aa15.95■□□□□ 0.14
ZEB2-246ENST00000638128 ANP32AP39687 249 aaKnown RBP15.95■□□□□ 0.14
ZEB2-246ENST00000638128 RANGAP1P46060 587 aaPredicted RBP15.93■□□□□ 0.14
ZEB2-246ENST00000638128 EIF5BO60841 1220 aaKnown RBP15.91■□□□□ 0.14
ZEB2-246ENST00000638128 UPF2Q9HAU5 1272 aaKnown RBP15.91■□□□□ 0.14
ZEB2-246ENST00000638128 UBTFP17480 764 aaKnown RBP15.91■□□□□ 0.14
ZEB2-246ENST00000638128 EHMT2Q96KQ7 1210 aa15.88■□□□□ 0.13
ZEB2-246ENST00000638128 NCLP19338 710 aaKnown RBP15.88■□□□□ 0.13
ZEB2-246ENST00000638128 TRIM41Q8WV44 630 aa15.84■□□□□ 0.13
ZEB2-246ENST00000638128 HSP90AA1P07900 732 aaKnown RBP15.8■□□□□ 0.12
ZEB2-246ENST00000638128 SLC4A1APQ9BWU0 796 aaKnown RBP15.77■□□□□ 0.12
ZEB2-246ENST00000638128 TRIM26Q12899 539 aaPredicted RBP15.75■□□□□ 0.11
ZEB2-246ENST00000638128 CANXP27824 592 aaKnown RBP15.74■□□□□ 0.11
ZEB2-246ENST00000638128 POLR3GLQ9BT43 218 aa15.7■□□□□ 0.1
ZEB2-246ENST00000638128 L1TD1Q5T7N2 865 aaKnown RBP15.69■□□□□ 0.1
ZEB2-246ENST00000638128 SHROOM4Q9ULL8 1493 aa15.63■□□□□ 0.09
ZEB2-246ENST00000638128 NRDCO43847 1150 aa15.58■□□□□ 0.08
ZEB2-246ENST00000638128 ANP32CO43423 234 aa15.57■□□□□ 0.08
ZEB2-246ENST00000638128 USP35Q9P2H5 1018 aa15.57■□□□□ 0.08
ZEB2-246ENST00000638128 GOLGA6L6A8MZA4 724 aa15.52■□□□□ 0.07
ZEB2-246ENST00000638128 GOLGA6L22H0YM25 854 aa15.51■□□□□ 0.07
ZEB2-246ENST00000638128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
ZEB2-246ENST00000638128 ZRSR1Q15695 479 aaKnown RBP15.5■□□□□ 0.07
ZEB2-246ENST00000638128 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
ZEB2-246ENST00000638128 HRCP23327 699 aa15.5■□□□□ 0.07
ZEB2-246ENST00000638128 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.46■□□□□ 0.07
ZEB2-246ENST00000638128 ERICH6BQ5W0A0 696 aa15.41■□□□□ 0.06
ZEB2-246ENST00000638128 DIEXFQ68CQ4 756 aaKnown RBP15.41■□□□□ 0.06
ZEB2-246ENST00000638128 BECN1Q14457 450 aa15.4■□□□□ 0.06
ZEB2-246ENST00000638128 ARID4BQ4LE39 1312 aaPredicted RBP15.39■□□□□ 0.05
ZEB2-246ENST00000638128 SLC24A1O60721 1099 aa15.37■□□□□ 0.05
ZEB2-246ENST00000638128 DDRGK1Q96HY6 314 aa15.36■□□□□ 0.05
ZEB2-246ENST00000638128 MYH16Q9H6N6 1097 aa15.35■□□□□ 0.05
ZEB2-246ENST00000638128 CHAF1AQ13111 956 aaPredicted RBP15.33■□□□□ 0.05
ZEB2-246ENST00000638128 ACIN1Q9UKV3 1341 aaKnown RBP15.32■□□□□ 0.04
ZEB2-246ENST00000638128 CALRP27797 417 aaKnown RBP15.31■□□□□ 0.04
ZEB2-246ENST00000638128 PTMSP20962 102 aa15.28■□□□□ 0.04
ZEB2-246ENST00000638128 NPM2Q86SE8 214 aaKnown RBP15.26■□□□□ 0.03
ZEB2-246ENST00000638128 CASC1Q6TDU7 716 aa15.23■□□□□ 0.03
ZEB2-246ENST00000638128 CFAP44Q96MT7 982 aa15.21■□□□□ 0.03
ZEB2-246ENST00000638128 NEUROD1Q13562 356 aa15.21■□□□□ 0.02
ZEB2-246ENST00000638128 PTMAP06454 111 aaKnown RBP15.19■□□□□ 0.02
ZEB2-246ENST00000638128 ZNF326Q5BKZ1 582 aaKnown RBP15.19■□□□□ 0.02
ZEB2-246ENST00000638128 CHMP4BQ9H444 224 aaKnown RBP15.19■□□□□ 0.02
ZEB2-246ENST00000638128 DNTTIP2Q5QJE6 756 aaKnown RBP15.18■□□□□ 0.02
ZEB2-246ENST00000638128 KIAA2012Q0VF49 1180 aa15.18■□□□□ 0.02
ZEB2-246ENST00000638128 ITGAEP38570 1179 aa15.13■□□□□ 0.01
ZEB2-246ENST00000638128 TRIM52Q96A61 297 aa15.1■□□□□ 0.01
ZEB2-246ENST00000638128 ESF1Q9H501 851 aaKnown RBP15.09■□□□□ 0.01
ZEB2-246ENST00000638128 SETQ01105 290 aaPredicted RBP15.09■□□□□ 0.01
ZEB2-246ENST00000638128 PNNQ9H307 717 aaKnown RBP15.08■□□□□ 0
ZEB2-246ENST00000638128 GOLGA6L4A6NEF3 574 aa15.06■□□□□ 0
ZEB2-246ENST00000638128 PPM1GO15355 546 aaPredicted RBP15.06■□□□□ 0
ZEB2-246ENST00000638128 GOLGA6L1Q8N7Z2 621 aa15.06■□□□□ 0
ZEB2-246ENST00000638128 CHIC1Q5VXU3 224 aa15.05■□□□□ 0
ZEB2-246ENST00000638128 CCDC34Q96HJ3 373 aa15.05■□□□□ -0
ZEB2-246ENST00000638128 BCANQ96GW7 911 aa15.04■□□□□ -0
ZEB2-246ENST00000638128 TNNT3P45378 269 aaPredicted RBP15.04■□□□□ -0
ZEB2-246ENST00000638128 CNGB1Q14028 1251 aaPredicted RBP15.01□□□□□ -0.01
ZEB2-246ENST00000638128 A0A0U1RQG5 324 aaPredicted RBP15□□□□□ -0.01
ZEB2-246ENST00000638128 GTF3C3Q9Y5Q9 886 aa14.98□□□□□ -0.01
ZEB2-246ENST00000638128 ANO8Q9HCE9 1232 aaPredicted RBP14.97□□□□□ -0.01
ZEB2-246ENST00000638128 CCDC136Q96JN2 1154 aa14.97□□□□□ -0.01
ZEB2-246ENST00000638128 FAM50AQ14320 339 aaKnown RBP14.97□□□□□ -0.01
ZEB2-246ENST00000638128 NOC3LQ8WTT2 800 aaKnown RBP14.96□□□□□ -0.01
ZEB2-246ENST00000638128 EIF4G2P78344 907 aaKnown RBP eCLIP14.96□□□□□ -0.021e-18■■■■□ 23.9
ZEB2-246ENST00000638128 MS4A1P11836 297 aa14.94□□□□□ -0.02
ZEB2-246ENST00000638128 MSNP26038 577 aaKnown RBP14.92□□□□□ -0.02
ZEB2-246ENST00000638128 HTATSF1O43719 755 aaKnown RBP14.92□□□□□ -0.02
ZEB2-246ENST00000638128 BCL11AQ9H165 835 aa14.89□□□□□ -0.03
ZEB2-246ENST00000638128 WDR43Q15061 677 aaKnown RBP eCLIP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms