RNA–Protein interactions for RNA: ENST00000392861.6

ZEB2-202, Transcript of zinc finger E-box binding homeobox 2, humanhuman

TSL 1 (best)

Gene ZEB2, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-202ENST00000392861 NISCHQ9Y2I1 1504 aa31.78■■■□□ 2.68
ZEB2-202ENST00000392861 CCDC180Q9P1Z9 1646 aa28.38■■■□□ 2.13
ZEB2-202ENST00000392861 ABCC9O60706 1549 aa27.74■■■□□ 2.03
ZEB2-202ENST00000392861 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
ZEB2-202ENST00000392861 NACADO15069 1562 aa26.67■■□□□ 1.86
ZEB2-202ENST00000392861 MYO15BQ96JP2 1530 aa26.53■■□□□ 1.84
ZEB2-202ENST00000392861 ZCCHC6Q5VYS8 1495 aaKnown RBP26.49■■□□□ 1.83
ZEB2-202ENST00000392861 DCAF8L2P0C7V8 631 aa26.36■■□□□ 1.81
ZEB2-202ENST00000392861 DCAF1Q9Y4B6 1507 aa26.35■■□□□ 1.81
ZEB2-202ENST00000392861 UNC13AQ9UPW8 1703 aa26.18■■□□□ 1.78
ZEB2-202ENST00000392861 BICRAQ9NZM4 1560 aa25.95■■□□□ 1.74
ZEB2-202ENST00000392861 PABPN1Q86U42 306 aaKnown RBP eCLIP25.84■■□□□ 1.73
ZEB2-202ENST00000392861 SCRIBQ14160 1630 aa25.8■■□□□ 1.72
ZEB2-202ENST00000392861 SHROOM4Q9ULL8 1493 aa25.7■■□□□ 1.7
ZEB2-202ENST00000392861 DNAJC5BQ9UF47 199 aa25.56■■□□□ 1.68
ZEB2-202ENST00000392861 EIF4G1Q04637 1599 aaKnown RBP25.25■■□□□ 1.63
ZEB2-202ENST00000392861 CC2D2AQ9P2K1 1620 aa25.16■■□□□ 1.62
ZEB2-202ENST00000392861 CECR2Q9BXF3 1484 aa24.97■■□□□ 1.59
ZEB2-202ENST00000392861 SMARCA4P51532 1647 aa24.71■■□□□ 1.55
ZEB2-202ENST00000392861 BAZ1AQ9NRL2 1556 aaPredicted RBP24.65■■□□□ 1.54
ZEB2-202ENST00000392861 NCAPD3P42695 1498 aa24.59■■□□□ 1.53
ZEB2-202ENST00000392861 ATAD2BQ9ULI0 1458 aa24.58■■□□□ 1.53
ZEB2-202ENST00000392861 SMARCA2P51531 1590 aa24.55■■□□□ 1.52
ZEB2-202ENST00000392861 PEG3Q9GZU2 1588 aa24.52■■□□□ 1.52
ZEB2-202ENST00000392861 HMGXB3Q12766 1538 aa24.51■■□□□ 1.51
ZEB2-202ENST00000392861 MROH2BQ7Z745 1585 aa24.48■■□□□ 1.51
ZEB2-202ENST00000392861 BAZ1BQ9UIG0 1483 aaKnown RBP24.35■■□□□ 1.49
ZEB2-202ENST00000392861 WIZO95785 1651 aa24.22■■□□□ 1.47
ZEB2-202ENST00000392861 RSF1Q96T23 1441 aaPredicted RBP24.14■■□□□ 1.45
ZEB2-202ENST00000392861 NESP48681 1621 aa24■■□□□ 1.43
ZEB2-202ENST00000392861 LAMC3Q9Y6N6 1575 aa23.98■■□□□ 1.43
ZEB2-202ENST00000392861 TOP2AP11388 1531 aaKnown RBP23.97■■□□□ 1.43
ZEB2-202ENST00000392861 ERCC6Q03468 1493 aa23.91■■□□□ 1.42
ZEB2-202ENST00000392861 CADPSQ9ULU8 1353 aa23.83■■□□□ 1.41
ZEB2-202ENST00000392861 CUX2O14529 1486 aa23.79■■□□□ 1.4
ZEB2-202ENST00000392861 KIF21AQ7Z4S6 1674 aa23.78■■□□□ 1.4
ZEB2-202ENST00000392861 PDS5BQ9NTI5 1447 aa23.76■■□□□ 1.39
ZEB2-202ENST00000392861 THOC2Q8NI27 1593 aaKnown RBP23.76■■□□□ 1.39
ZEB2-202ENST00000392861 CFTRP13569 1480 aa23.7■■□□□ 1.39
ZEB2-202ENST00000392861 CCDC88BA6NC98 1476 aa23.65■■□□□ 1.38
ZEB2-202ENST00000392861 PRDM2Q13029 1718 aa23.6■■□□□ 1.37
ZEB2-202ENST00000392861 FANCD2Q9BXW9 1451 aa23.56■■□□□ 1.36
ZEB2-202ENST00000392861 MRC2Q9UBG0 1479 aa23.55■■□□□ 1.36
ZEB2-202ENST00000392861 CEP164Q9UPV0 1460 aa23.55■■□□□ 1.36
ZEB2-202ENST00000392861 WDR62O43379 1518 aa23.53■■□□□ 1.36
ZEB2-202ENST00000392861 URB2Q14146 1524 aaKnown RBP23.36■■□□□ 1.33
ZEB2-202ENST00000392861 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
ZEB2-202ENST00000392861 TOPBP1Q92547 1522 aa23.19■■□□□ 1.3
ZEB2-202ENST00000392861 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
ZEB2-202ENST00000392861 ABCC8Q09428 1581 aa23.17■■□□□ 1.3
ZEB2-202ENST00000392861 DNAJC5Q9H3Z4 198 aa23.11■■□□□ 1.29
ZEB2-202ENST00000392861 IFT140Q96RY7 1462 aa23.07■■□□□ 1.28
ZEB2-202ENST00000392861 TARBP1Q13395 1621 aaKnown RBP22.99■■□□□ 1.27
ZEB2-202ENST00000392861 POLA1P09884 1462 aaPredicted RBP22.99■■□□□ 1.27
ZEB2-202ENST00000392861 CUX1P39880 1505 aa22.98■■□□□ 1.27
ZEB2-202ENST00000392861 ZNF608Q9ULD9 1512 aaPredicted RBP22.97■■□□□ 1.27
ZEB2-202ENST00000392861 EIF4G3O43432 1585 aaKnown RBP22.92■■□□□ 1.26
ZEB2-202ENST00000392861 FGD5Q6ZNL6 1462 aa22.9■■□□□ 1.26
ZEB2-202ENST00000392861 RAD54L2Q9Y4B4 1467 aa22.84■■□□□ 1.25
ZEB2-202ENST00000392861 WDR97A6NE52 1622 aa22.84■■□□□ 1.25
ZEB2-202ENST00000392861 SOGA1O94964 1423 aa22.83■■□□□ 1.25
ZEB2-202ENST00000392861 BIVM-ERCC5R4GMW8 1640 aa22.8■■□□□ 1.24
ZEB2-202ENST00000392861 AQRO60306 1485 aaKnown RBP eCLIP22.79■■□□□ 1.241e-8■■■■□ 22.7
ZEB2-202ENST00000392861 TOP2BQ02880 1626 aa22.78■■□□□ 1.24
ZEB2-202ENST00000392861 WRNQ14191 1432 aaPredicted RBP eCLIP22.75■■□□□ 1.23
ZEB2-202ENST00000392861 SYNJ1O43426 1573 aa22.75■■□□□ 1.23
ZEB2-202ENST00000392861 ABCA10Q8WWZ4 1543 aa22.71■■□□□ 1.23
ZEB2-202ENST00000392861 TDRD9Q8NDG6 1382 aaKnown RBP22.7■■□□□ 1.22
ZEB2-202ENST00000392861 ABCA5Q8WWZ7 1642 aa22.66■■□□□ 1.22
ZEB2-202ENST00000392861 OSCARQ8IYS5 282 aa22.66■■□□□ 1.22
ZEB2-202ENST00000392861 CHD1O14646 1710 aa22.65■■□□□ 1.22
ZEB2-202ENST00000392861 PBRM1Q86U86 1689 aa22.62■■□□□ 1.21
ZEB2-202ENST00000392861 GRIN2BQ13224 1484 aa22.62■■□□□ 1.21
ZEB2-202ENST00000392861 SNAPC4Q5SXM2 1469 aa22.61■■□□□ 1.21
ZEB2-202ENST00000392861 MAGI1Q96QZ7 1491 aaPredicted RBP22.61■■□□□ 1.21
ZEB2-202ENST00000392861 GAPVD1Q14C86 1478 aa22.6■■□□□ 1.21
ZEB2-202ENST00000392861 SYNJ2O15056 1496 aa22.5■■□□□ 1.19
ZEB2-202ENST00000392861 ADAMTS12P58397 1594 aa22.44■■□□□ 1.18
ZEB2-202ENST00000392861 ERICH3Q5RHP9 1530 aa22.44■■□□□ 1.18
ZEB2-202ENST00000392861 CLASP1Q7Z460 1538 aa22.42■■□□□ 1.18
ZEB2-202ENST00000392861 FBLN2P98095 1184 aa22.42■■□□□ 1.18
ZEB2-202ENST00000392861 RIMBP3CA6NJZ7 1639 aa22.42■■□□□ 1.18
ZEB2-202ENST00000392861 RIMBP3BA6NNM3 1639 aa22.42■■□□□ 1.18
ZEB2-202ENST00000392861 RIMBP3Q9UFD9 1639 aa22.42■■□□□ 1.18
ZEB2-202ENST00000392861 ARHGEF11O15085 1522 aa22.4■■□□□ 1.18
ZEB2-202ENST00000392861 CHMP7Q8WUX9 453 aaPredicted RBP22.39■■□□□ 1.17
ZEB2-202ENST00000392861 GRIN2AQ12879 1464 aa22.35■■□□□ 1.17
ZEB2-202ENST00000392861 FHAD1B1AJZ9 1412 aa22.34■■□□□ 1.17
ZEB2-202ENST00000392861 NUP160Q12769 1436 aa22.28■■□□□ 1.16
ZEB2-202ENST00000392861 KIF27Q86VH2 1401 aa22.27■■□□□ 1.16
ZEB2-202ENST00000392861 CEP170Q5SW79 1584 aa22.26■■□□□ 1.15
ZEB2-202ENST00000392861 CUL7Q14999 1698 aa22.22■■□□□ 1.15
ZEB2-202ENST00000392861 ARAP1Q96P48 1450 aa22.22■■□□□ 1.15
ZEB2-202ENST00000392861 TRIM41Q8WV44 630 aa22.2■■□□□ 1.14
ZEB2-202ENST00000392861 IGF1RP08069 1367 aa22.2■■□□□ 1.14
ZEB2-202ENST00000392861 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
ZEB2-202ENST00000392861 RUSC2Q8N2Y8 1516 aa22.12■■□□□ 1.13
ZEB2-202ENST00000392861 ERCC6L2Q5T890 1561 aa22.06■■□□□ 1.12
ZEB2-202ENST00000392861 CYB5RLQ6IPT4 315 aa22.06■■□□□ 1.12
ZEB2-202ENST00000392861 CARMIL1Q5VZK9 1371 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms