RNA–Protein interactions for RNA: ENST00000219271.3

MMP15-201, Transcript of matrix metallopeptidase 15, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP15, Length 4,250 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP15-201ENST00000219271 NISCHQ9Y2I1 1504 aa32.02■■■□□ 2.72
MMP15-201ENST00000219271 DCAF8L2P0C7V8 631 aa30.91■■■□□ 2.54
MMP15-201ENST00000219271 SHROOM4Q9ULL8 1493 aa28.99■■■□□ 2.23
MMP15-201ENST00000219271 SUPT5HO00267 1087 aaKnown RBP28.66■■■□□ 2.18
MMP15-201ENST00000219271 ABCC9O60706 1549 aa27.9■■■□□ 2.06
MMP15-201ENST00000219271 EHMT2Q96KQ7 1210 aa27.29■■□□□ 1.96
MMP15-201ENST00000219271 PABPN1Q86U42 306 aaKnown RBP eCLIP27.23■■□□□ 1.95
MMP15-201ENST00000219271 FAM9AQ8IZU1 332 aaPredicted RBP26.88■■□□□ 1.89
MMP15-201ENST00000219271 CCDC180Q9P1Z9 1646 aa26.8■■□□□ 1.88
MMP15-201ENST00000219271 TRIM41Q8WV44 630 aa26.59■■□□□ 1.85
MMP15-201ENST00000219271 ZCCHC6Q5VYS8 1495 aaKnown RBP26.52■■□□□ 1.84
MMP15-201ENST00000219271 RANGAP1P46060 587 aaPredicted RBP26.4■■□□□ 1.82
MMP15-201ENST00000219271 SCRIBQ14160 1630 aa26.3■■□□□ 1.8
MMP15-201ENST00000219271 APLP2Q06481 763 aa26.1■■□□□ 1.77
MMP15-201ENST00000219271 TTBK1Q5TCY1 1321 aaPredicted RBP26.08■■□□□ 1.77
MMP15-201ENST00000219271 UBTFP17480 764 aaKnown RBP26.07■■□□□ 1.76
MMP15-201ENST00000219271 RB1CC1Q8TDY2 1594 aa26.07■■□□□ 1.76
MMP15-201ENST00000219271 ATP1B4Q9UN42 357 aaPredicted RBP25.94■■□□□ 1.74
MMP15-201ENST00000219271 NACADO15069 1562 aa25.89■■□□□ 1.74
MMP15-201ENST00000219271 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
MMP15-201ENST00000219271 LOC105371045A0A1W2PR82 267 aa25.59■■□□□ 1.69
MMP15-201ENST00000219271 DCAF1Q9Y4B6 1507 aa25.51■■□□□ 1.67
MMP15-201ENST00000219271 PPARGC1BQ86YN6 1023 aaKnown RBP25.46■■□□□ 1.67
MMP15-201ENST00000219271 PCGF6Q9BYE7 350 aa25.37■■□□□ 1.65
MMP15-201ENST00000219271 FBLN2P98095 1184 aa25.36■■□□□ 1.65
MMP15-201ENST00000219271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.34■■□□□ 1.65
MMP15-201ENST00000219271 HNRNPUL2Q1KMD3 747 aaKnown RBP25.34■■□□□ 1.65
MMP15-201ENST00000219271 RSF1Q96T23 1441 aaPredicted RBP25.29■■□□□ 1.64
MMP15-201ENST00000219271 CECR2Q9BXF3 1484 aa25.28■■□□□ 1.64
MMP15-201ENST00000219271 BAZ1BQ9UIG0 1483 aaKnown RBP25.08■■□□□ 1.61
MMP15-201ENST00000219271 MYO15BQ96JP2 1530 aa25.06■■□□□ 1.6
MMP15-201ENST00000219271 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
MMP15-201ENST00000219271 CSRNP3Q8WYN3 585 aa24.98■■□□□ 1.59
MMP15-201ENST00000219271 ITGAEP38570 1179 aa24.96■■□□□ 1.59
MMP15-201ENST00000219271 MYT1LQ9UL68 1186 aa24.92■■□□□ 1.58
MMP15-201ENST00000219271 P3H3Q8IVL6 736 aa24.89■■□□□ 1.58
MMP15-201ENST00000219271 MROH2BQ7Z745 1585 aa24.87■■□□□ 1.57
MMP15-201ENST00000219271 CCER1Q8TC90 406 aaPredicted RBP24.81■■□□□ 1.56
MMP15-201ENST00000219271 ARID3CA6NKF2 412 aa24.78■■□□□ 1.56
MMP15-201ENST00000219271 ERCC6Q03468 1493 aa24.64■■□□□ 1.53
MMP15-201ENST00000219271 TRIM26Q12899 539 aaPredicted RBP24.61■■□□□ 1.53
MMP15-201ENST00000219271 CHMP7Q8WUX9 453 aaPredicted RBP24.59■■□□□ 1.53
MMP15-201ENST00000219271 WRNQ14191 1432 aaPredicted RBP eCLIP24.55■■□□□ 1.52
MMP15-201ENST00000219271 SMARCA2P51531 1590 aa24.55■■□□□ 1.52
MMP15-201ENST00000219271 FAM50AQ14320 339 aaKnown RBP24.51■■□□□ 1.51
MMP15-201ENST00000219271 CCDC88BA6NC98 1476 aa24.49■■□□□ 1.51
MMP15-201ENST00000219271 ATAD2BQ9ULI0 1458 aa24.49■■□□□ 1.51
MMP15-201ENST00000219271 WIZO95785 1651 aa24.48■■□□□ 1.51
MMP15-201ENST00000219271 SMARCA4P51532 1647 aa24.36■■□□□ 1.49
MMP15-201ENST00000219271 CADPSQ9ULU8 1353 aa24.3■■□□□ 1.48
MMP15-201ENST00000219271 PDS5BQ9NTI5 1447 aa24.29■■□□□ 1.48
MMP15-201ENST00000219271 ZNF777Q9ULD5 760 aaPredicted RBP24.24■■□□□ 1.47
MMP15-201ENST00000219271 NPM1P06748 294 aaKnown RBP eCLIP24.24■■□□□ 1.47
MMP15-201ENST00000219271 TOP2AP11388 1531 aaKnown RBP24.23■■□□□ 1.47
MMP15-201ENST00000219271 ZEB1P37275 1124 aaPredicted RBP24.23■■□□□ 1.47
MMP15-201ENST00000219271 KIF27Q86VH2 1401 aa24.22■■□□□ 1.47
MMP15-201ENST00000219271 EIF4G1Q04637 1599 aaKnown RBP24.22■■□□□ 1.47
MMP15-201ENST00000219271 CDK11AQ9UQ88 783 aaPredicted RBP24.21■■□□□ 1.47
MMP15-201ENST00000219271 TRIM52Q96A61 297 aa24.15■■□□□ 1.46
MMP15-201ENST00000219271 ABCC8Q09428 1581 aa24.14■■□□□ 1.46
MMP15-201ENST00000219271 TDRD9Q8NDG6 1382 aaKnown RBP24.13■■□□□ 1.45
MMP15-201ENST00000219271 DNAJC5BQ9UF47 199 aa24.13■■□□□ 1.45
MMP15-201ENST00000219271 CUX2O14529 1486 aa24.12■■□□□ 1.45
MMP15-201ENST00000219271 SOGA1O94964 1423 aa24.08■■□□□ 1.45
MMP15-201ENST00000219271 NCAPD3P42695 1498 aa24.06■■□□□ 1.44
MMP15-201ENST00000219271 EEA1Q15075 1411 aa24.05■■□□□ 1.44
MMP15-201ENST00000219271 CLIP1P30622 1438 aa24.02■■□□□ 1.44
MMP15-201ENST00000219271 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
MMP15-201ENST00000219271 CARMIL1Q5VZK9 1371 aa23.98■■□□□ 1.43
MMP15-201ENST00000219271 POLR3GLQ9BT43 218 aa23.97■■□□□ 1.43
MMP15-201ENST00000219271 KCNH8Q96L42 1107 aa23.96■■□□□ 1.43
MMP15-201ENST00000219271 GOLGA3Q08378 1498 aa23.94■■□□□ 1.42
MMP15-201ENST00000219271 FANCD2Q9BXW9 1451 aa23.94■■□□□ 1.42
MMP15-201ENST00000219271 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
MMP15-201ENST00000219271 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
MMP15-201ENST00000219271 NEUROD1Q13562 356 aa23.89■■□□□ 1.41
MMP15-201ENST00000219271 MTUS2Q5JR59 1369 aa23.86■■□□□ 1.41
MMP15-201ENST00000219271 CEP162Q5TB80 1403 aa23.84■■□□□ 1.41
MMP15-201ENST00000219271 CHIC2Q9UKJ5 165 aa23.82■■□□□ 1.4
MMP15-201ENST00000219271 CNGB1Q14028 1251 aaPredicted RBP23.81■■□□□ 1.4
MMP15-201ENST00000219271 PLEKHD1A6NEE1 506 aa23.81■■□□□ 1.4
MMP15-201ENST00000219271 NESP48681 1621 aa23.78■■□□□ 1.4
MMP15-201ENST00000219271 PLPPR3Q6T4P5 718 aa23.78■■□□□ 1.4
MMP15-201ENST00000219271 TNIKQ9UKE5 1360 aa23.75■■□□□ 1.39
MMP15-201ENST00000219271 ZNF326Q5BKZ1 582 aaKnown RBP23.74■■□□□ 1.39
MMP15-201ENST00000219271 HRCP23327 699 aa23.69■■□□□ 1.38
MMP15-201ENST00000219271 TSPY4P0CV99 314 aa23.66■■□□□ 1.38
MMP15-201ENST00000219271 TSPY10P0CW01 314 aa23.66■■□□□ 1.38
MMP15-201ENST00000219271 ESF1Q9H501 851 aaKnown RBP23.65■■□□□ 1.38
MMP15-201ENST00000219271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.62■■□□□ 1.37
MMP15-201ENST00000219271 SLC4A1APQ9BWU0 796 aaKnown RBP23.62■■□□□ 1.37
MMP15-201ENST00000219271 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
MMP15-201ENST00000219271 RUSC2Q8N2Y8 1516 aa23.59■■□□□ 1.37
MMP15-201ENST00000219271 UNC13AQ9UPW8 1703 aa23.59■■□□□ 1.37
MMP15-201ENST00000219271 CFTRP13569 1480 aa23.57■■□□□ 1.36
MMP15-201ENST00000219271 FGD5Q6ZNL6 1462 aa23.56■■□□□ 1.36
MMP15-201ENST00000219271 HMGXB3Q12766 1538 aa23.55■■□□□ 1.36
MMP15-201ENST00000219271 BCANQ96GW7 911 aa23.54■■□□□ 1.36
MMP15-201ENST00000219271 JPH4Q96JJ6 628 aa23.54■■□□□ 1.36
MMP15-201ENST00000219271 CFDP1Q9UEE9 299 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms