Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 PTMA-207ENST00000440384 222 ntTSL 317.7■□□□□ 0.429e-7■■■■□ 23.4
NCBP2P52298 GALK1-202ENST00000586244 1180 ntTSL 1 (best)17.65■□□□□ 0.429e-7■■■■□ 23.4
NCBP2P52298 PIDD1-211ENST00000534649 754 ntTSL 217.36■□□□□ 0.379e-7■■■■□ 23.4
NCBP2P52298 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.03■□□□□ 0.329e-7■■■■□ 23.4
NCBP2P52298 MSH5-207ENST00000425703 694 ntTSL 516.95■□□□□ 0.39e-7■■■■□ 23.4
NCBP2P52298 CISD3-206ENST00000619858 2326 ntTSL 1 (best)16.85■□□□□ 0.299e-7■■■■□ 23.4
NCBP2P52298 RPUSD4-206ENST00000532674 582 ntTSL 516.75■□□□□ 0.279e-7■■■■□ 23.4
NCBP2P52298 AL353801.3-201ENST00000609898 542 ntBASIC16.59■□□□□ 0.259e-7■■■■□ 23.4
NCBP2P52298 CEP76-204ENST00000586887 897 ntTSL 216.11■□□□□ 0.179e-7■■■■□ 23.4
NCBP2P52298 CEP76-209ENST00000590143 2380 ntTSL 1 (best)16.03■□□□□ 0.169e-7■■■■□ 23.4
NCBP2P52298 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.99■□□□□ 0.159e-7■■■■□ 23.4
NCBP2P52298 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.66■□□□□ 0.19e-7■■■■□ 23.4
NCBP2P52298 RPUSD4-207ENST00000532800 1030 ntTSL 215.42■□□□□ 0.069e-7■■■■□ 23.4
NCBP2P52298 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.049e-7■■■■□ 23.4
NCBP2P52298 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.69□□□□□ -0.069e-7■■■■□ 23.4
NCBP2P52298 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.47□□□□□ -0.099e-7■■■■□ 23.4
NCBP2P52298 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.139e-7■■■■□ 23.4
NCBP2P52298 CEP76-206ENST00000587929 787 ntTSL 414.18□□□□□ -0.149e-7■■■■□ 23.4
NCBP2P52298 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.159e-7■■■■□ 23.4
NCBP2P52298 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.199e-7■■■■□ 23.4
NCBP2P52298 PIDD1-205ENST00000527357 4496 ntTSL 213.81□□□□□ -0.29e-7■■■■□ 23.4
NCBP2P52298 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.219e-7■■■■□ 23.4
NCBP2P52298 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.64□□□□□ -0.239e-7■■■■□ 23.4
NCBP2P52298 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.38□□□□□ -0.279e-7■■■■□ 23.4
NCBP2P52298 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.17□□□□□ -0.39e-7■■■■□ 23.4
NCBP2P52298 PIDD1-204ENST00000525028 3175 ntTSL 1 (best)13.12□□□□□ -0.319e-7■■■■□ 23.4
NCBP2P52298 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.399e-7■■■■□ 23.4
NCBP2P52298 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.49e-7■■■■□ 23.4
NCBP2P52298 PIDD1-203ENST00000524486 3917 ntTSL 212.55□□□□□ -0.49e-7■■■■□ 23.4
NCBP2P52298 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.419e-7■■■■□ 23.4
NCBP2P52298 PIDD1-210ENST00000534525 3994 ntTSL 212.15□□□□□ -0.469e-7■■■■□ 23.4
NCBP2P52298 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.59e-7■■■■□ 23.4
NCBP2P52298 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.519e-7■■■■□ 23.4
NCBP2P52298 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC11.82□□□□□ -0.529e-7■■■■□ 23.4
NCBP2P52298 PRIMPOL-209ENST00000512834 2174 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.579e-7■■■■□ 23.4
NCBP2P52298 CEP76-212ENST00000593250 3309 ntTSL 511.27□□□□□ -0.619e-7■■■■□ 23.4
NCBP2P52298 ZNF689-206ENST00000566673 1412 ntTSL 210.97□□□□□ -0.659e-7■■■■□ 23.4
NCBP2P52298 PRIMPOL-205ENST00000509002 1631 ntTSL 1 (best)10.45□□□□□ -0.749e-7■■■■□ 23.4
NCBP2P52298 RPUSD4-203ENST00000526942 1791 ntTSL 510.42□□□□□ -0.749e-7■■■■□ 23.4
NCBP2P52298 ZNF689-202ENST00000563304 1207 ntTSL 1 (best)10.4□□□□□ -0.749e-7■■■■□ 23.4
NCBP2P52298 ZNF689-204ENST00000565440 1153 ntTSL 210.25□□□□□ -0.779e-7■■■■□ 23.4
NCBP2P52298 MSH5-SAPCD1-207ENST00000493662 3991 ntAPPRIS P5 TSL 1 (best) BASIC10.22□□□□□ -0.779e-7■■■■□ 23.4
NCBP2P52298 CCDC85C-201ENST00000380243 16393 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.799e-7■■■■□ 23.4
NCBP2P52298 PRIMPOL-202ENST00000503752 2168 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.879e-7■■■■□ 23.4
NCBP2P52298 FSD1L-207ENST00000484973 1711 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.99e-7■■■■□ 23.4
NCBP2P52298 FSD1L-203ENST00000394926 1947 ntTSL 5 BASIC9.09□□□□□ -0.959e-7■■■■□ 23.4
NCBP2P52298 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.085e-7■■■■□ 23.4
NCBP2P52298 PRIMPOL-206ENST00000509538 804 ntTSL 28□□□□□ -1.139e-7■■■■□ 23.4
NCBP2P52298 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.82□□□□□ -1.169e-7■■■■□ 23.4
NCBP2P52298 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC7.67□□□□□ -1.189e-7■■■■□ 23.4
NCBP2P52298 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC7.31□□□□□ -1.249e-7■■■■□ 23.4
NCBP2P52298 PRIMPOL-203ENST00000506278 1138 ntTSL 1 (best)7.24□□□□□ -1.259e-7■■■■□ 23.4
NCBP2P52298 PRIMPOL-210ENST00000515152 784 ntTSL 36.78□□□□□ -1.329e-7■■■■□ 23.4
NCBP2P52298 ARHGAP11B-204ENST00000564902 1161 ntTSL 1 (best)4.08□□□□□ -1.769e-7■■■■□ 23.4
NCBP2P52298 FSD1L-205ENST00000480279 566 ntTSL 31.96□□□□□ -2.19e-7■■■■□ 23.4
NCBP2P52298 SNF8-205ENST00000507302 742 ntTSL 314.56□□□□□ -0.086e-10■■■■□ 23.4
NCBP2P52298 SFT2D1-202ENST00000478705 659 ntTSL 214.87□□□□□ -0.034e-17■■■■□ 23.4
NCBP2P52298 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.164e-17■■■■□ 23.4
NCBP2P52298 SFT2D1-204ENST00000487841 2576 ntTSL 1 (best)12.12□□□□□ -0.474e-17■■■■□ 23.4
NCBP2P52298 SNHG21-202ENST00000558174 725 ntTSL 213.28□□□□□ -0.282e-9■■■■□ 23.4
NCBP2P52298 SNHG21-201ENST00000544685 594 ntTSL 213.28□□□□□ -0.282e-9■■■■□ 23.4
NCBP2P52298 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.28□□□□□ -0.282e-9■■■■□ 23.4
NCBP2P52298 SNHG21-203ENST00000558687 558 ntTSL 411.93□□□□□ -0.52e-9■■■■□ 23.4
NCBP2P52298 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC11.76□□□□□ -0.532e-9■■■■□ 23.4
NCBP2P52298 CYTH1-216ENST00000591574 1043 ntTSL 322.11■■□□□ 1.134e-18■■■■□ 23.4
NCBP2P52298 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.75■□□□□ 0.434e-18■■■■□ 23.4
NCBP2P52298 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.351e-6■■■■□ 23.4
NCBP2P52298 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.52■□□□□ 0.241e-6■■■■□ 23.4
NCBP2P52298 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.021e-6■■■■□ 23.4
NCBP2P52298 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.174e-18■■■■□ 23.4
NCBP2P52298 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.174e-18■■■■□ 23.4
NCBP2P52298 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.424e-18■■■■□ 23.4
NCBP2P52298 CYTH1-217ENST00000592497 454 ntTSL 37.71□□□□□ -1.184e-18■■■■□ 23.4
NCBP2P52298 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.45■□□□□ 0.061e-6■■■■□ 23.3
NCBP2P52298 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.56□□□□□ -0.081e-6■■■■□ 23.3
NCBP2P52298 RCHY1-203ENST00000504085 1123 ntTSL 1 (best)14.56□□□□□ -0.081e-6■■■■□ 23.3
NCBP2P52298 RCHY1-213ENST00000514589 2443 ntTSL 213.88□□□□□ -0.191e-6■■■■□ 23.3
NCBP2P52298 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.6□□□□□ -0.231e-6■■■■□ 23.3
NCBP2P52298 RCHY1-201ENST00000324439 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.531e-6■■■■□ 23.3
NCBP2P52298 RCHY1-209ENST00000513083 540 ntTSL 1 (best)5.71□□□□□ -1.51e-6■■■■□ 23.3
NCBP2P52298 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.71□□□□□ -1.51e-6■■■■□ 23.3
NCBP2P52298 RCHY1-211ENST00000513909 728 ntTSL 35□□□□□ -1.611e-6■■■■□ 23.3
NCBP2P52298 RCHY1-204ENST00000505105 1304 ntTSL 1 (best)4.77□□□□□ -1.651e-6■■■■□ 23.3
NCBP2P52298 RCHY1-212ENST00000514021 436 ntTSL 33.22□□□□□ -1.891e-6■■■■□ 23.3
NCBP2P52298 ZNF3-212ENST00000466121 522 ntTSL 213.55□□□□□ -0.243e-16■■■■□ 23.3
NCBP2P52298 ZNF3-204ENST00000412947 595 ntTSL 1 (best)11.81□□□□□ -0.523e-16■■■■□ 23.3
NCBP2P52298 ZNF3-210ENST00000449785 735 ntTSL 311.81□□□□□ -0.523e-16■■■■□ 23.3
NCBP2P52298 ZNF3-209ENST00000441298 574 ntTSL 411.75□□□□□ -0.533e-16■■■■□ 23.3
NCBP2P52298 ZNF3-211ENST00000460331 562 ntTSL 411.71□□□□□ -0.533e-16■■■■□ 23.3
NCBP2P52298 ZNF3-201ENST00000292393 512 ntTSL 211.39□□□□□ -0.593e-16■■■■□ 23.3
NCBP2P52298 ZNF3-214ENST00000485892 722 ntTSL 210.49□□□□□ -0.733e-16■■■■□ 23.3
NCBP2P52298 ZNF3-213ENST00000479192 640 ntTSL 210.12□□□□□ -0.793e-16■■■■□ 23.3
NCBP2P52298 ZNF3-205ENST00000413658 1441 ntTSL 1 (best) BASIC9.56□□□□□ -0.883e-16■■■■□ 23.3
NCBP2P52298 ZNF3-208ENST00000428683 999 ntTSL 29.34□□□□□ -0.913e-16■■■■□ 23.3
NCBP2P52298 ZNF3-215ENST00000487620 2660 ntTSL 29.2□□□□□ -0.943e-16■■■■□ 23.3
NCBP2P52298 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.053e-16■■■■□ 23.3
NCBP2P52298 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.133e-16■■■■□ 23.3
NCBP2P52298 Z98749.2-209ENST00000455209 792 ntTSL 315.35■□□□□ 0.052e-6■■■■□ 23.3
NCBP2P52298 Z98749.2-203ENST00000407491 574 ntTSL 314.94□□□□□ -0.022e-6■■■■□ 23.3
NCBP2P52298 Z98749.2-210ENST00000454577 468 ntTSL 314.64□□□□□ -0.072e-6■■■■□ 23.3
Retrieved 100 of 18,329 protein–RNA pairs in 423 ms