RNA–Protein interactions for RNA: ENST00000485892.5

ZNF3-214, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-214ENST00000485892 NISCHQ9Y2I1 1504 aa27.68■■■□□ 2.02
ZNF3-214ENST00000485892 CCDC180Q9P1Z9 1646 aa24.73■■□□□ 1.55
ZNF3-214ENST00000485892 ABCC9O60706 1549 aa24.31■■□□□ 1.48
ZNF3-214ENST00000485892 DCAF8L2P0C7V8 631 aa23.33■■□□□ 1.33
ZNF3-214ENST00000485892 RB1CC1Q8TDY2 1594 aa23.32■■□□□ 1.32
ZNF3-214ENST00000485892 NACADO15069 1562 aa23.22■■□□□ 1.31
ZNF3-214ENST00000485892 ZCCHC6Q5VYS8 1495 aaKnown RBP23.03■■□□□ 1.28
ZNF3-214ENST00000485892 MYO15BQ96JP2 1530 aa22.94■■□□□ 1.26
ZNF3-214ENST00000485892 UNC13AQ9UPW8 1703 aa22.92■■□□□ 1.26
ZNF3-214ENST00000485892 DCAF1Q9Y4B6 1507 aa22.83■■□□□ 1.25
ZNF3-214ENST00000485892 PABPN1Q86U42 306 aaKnown RBP eCLIP22.68■■□□□ 1.22
ZNF3-214ENST00000485892 SCRIBQ14160 1630 aa22.61■■□□□ 1.21
ZNF3-214ENST00000485892 BICRAQ9NZM4 1560 aa22.58■■□□□ 1.2
ZNF3-214ENST00000485892 DNAJC5BQ9UF47 199 aa22.31■■□□□ 1.16
ZNF3-214ENST00000485892 SHROOM4Q9ULL8 1493 aa22.24■■□□□ 1.15
ZNF3-214ENST00000485892 EIF4G1Q04637 1599 aaKnown RBP22.01■■□□□ 1.11
ZNF3-214ENST00000485892 CC2D2AQ9P2K1 1620 aa21.99■■□□□ 1.11
ZNF3-214ENST00000485892 CECR2Q9BXF3 1484 aa21.81■■□□□ 1.08
ZNF3-214ENST00000485892 SMARCA4P51532 1647 aa21.56■■□□□ 1.04
ZNF3-214ENST00000485892 BAZ1AQ9NRL2 1556 aaPredicted RBP21.49■■□□□ 1.03
ZNF3-214ENST00000485892 SMARCA2P51531 1590 aa21.41■■□□□ 1.02
ZNF3-214ENST00000485892 ATAD2BQ9ULI0 1458 aa21.39■■□□□ 1.02
ZNF3-214ENST00000485892 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
ZNF3-214ENST00000485892 NCAPD3P42695 1498 aa21.36■■□□□ 1.01
ZNF3-214ENST00000485892 HMGXB3Q12766 1538 aa21.3■■□□□ 1
ZNF3-214ENST00000485892 BAZ1BQ9UIG0 1483 aaKnown RBP21.28■■□□□ 1
ZNF3-214ENST00000485892 PEG3Q9GZU2 1588 aa21.26■□□□□ 0.99
ZNF3-214ENST00000485892 WIZO95785 1651 aa21.21■□□□□ 0.99
ZNF3-214ENST00000485892 RSF1Q96T23 1441 aaPredicted RBP21.03■□□□□ 0.96
ZNF3-214ENST00000485892 NESP48681 1621 aa21■□□□□ 0.95
ZNF3-214ENST00000485892 ERCC6Q03468 1493 aa20.98■□□□□ 0.95
ZNF3-214ENST00000485892 LAMC3Q9Y6N6 1575 aa20.91■□□□□ 0.94
ZNF3-214ENST00000485892 TOP2AP11388 1531 aaKnown RBP20.9■□□□□ 0.94
ZNF3-214ENST00000485892 KIF21AQ7Z4S6 1674 aa20.84■□□□□ 0.93
ZNF3-214ENST00000485892 CADPSQ9ULU8 1353 aa20.76■□□□□ 0.91
ZNF3-214ENST00000485892 PDS5BQ9NTI5 1447 aa20.74■□□□□ 0.91
ZNF3-214ENST00000485892 CUX2O14529 1486 aa20.7■□□□□ 0.9
ZNF3-214ENST00000485892 THOC2Q8NI27 1593 aaKnown RBP20.7■□□□□ 0.9
ZNF3-214ENST00000485892 PRDM2Q13029 1718 aa20.66■□□□□ 0.9
ZNF3-214ENST00000485892 CCDC88BA6NC98 1476 aa20.64■□□□□ 0.89
ZNF3-214ENST00000485892 CFTRP13569 1480 aa20.61■□□□□ 0.89
ZNF3-214ENST00000485892 FANCD2Q9BXW9 1451 aa20.58■□□□□ 0.89
ZNF3-214ENST00000485892 CEP164Q9UPV0 1460 aa20.58■□□□□ 0.89
ZNF3-214ENST00000485892 SUPT5HO00267 1087 aaKnown RBP20.57■□□□□ 0.88
ZNF3-214ENST00000485892 MRC2Q9UBG0 1479 aa20.55■□□□□ 0.88
ZNF3-214ENST00000485892 WDR62O43379 1518 aa20.48■□□□□ 0.87
ZNF3-214ENST00000485892 URB2Q14146 1524 aaKnown RBP20.37■□□□□ 0.85
ZNF3-214ENST00000485892 TOPBP1Q92547 1522 aa20.23■□□□□ 0.83
ZNF3-214ENST00000485892 DNMBPQ6XZF7 1577 aa20.22■□□□□ 0.83
ZNF3-214ENST00000485892 ABCC8Q09428 1581 aa20.21■□□□□ 0.83
ZNF3-214ENST00000485892 DNAJC5Q9H3Z4 198 aa20.16■□□□□ 0.82
ZNF3-214ENST00000485892 IFT140Q96RY7 1462 aa20.11■□□□□ 0.81
ZNF3-214ENST00000485892 ZNF608Q9ULD9 1512 aaPredicted RBP20.06■□□□□ 0.8
ZNF3-214ENST00000485892 CUX1P39880 1505 aa20.05■□□□□ 0.8
ZNF3-214ENST00000485892 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
ZNF3-214ENST00000485892 TARBP1Q13395 1621 aaKnown RBP20.04■□□□□ 0.8
ZNF3-214ENST00000485892 EIF4G3O43432 1585 aaKnown RBP20.04■□□□□ 0.8
ZNF3-214ENST00000485892 FGD5Q6ZNL6 1462 aa20.01■□□□□ 0.79
ZNF3-214ENST00000485892 RAD54L2Q9Y4B4 1467 aa19.99■□□□□ 0.79
ZNF3-214ENST00000485892 SOGA1O94964 1423 aa19.97■□□□□ 0.79
ZNF3-214ENST00000485892 AQRO60306 1485 aaKnown RBP eCLIP19.93■□□□□ 0.782e-7■■■■■ 35.8
ZNF3-214ENST00000485892 WDR97A6NE52 1622 aa19.9■□□□□ 0.78
ZNF3-214ENST00000485892 BIVM-ERCC5R4GMW8 1640 aa19.89■□□□□ 0.77
ZNF3-214ENST00000485892 CHD1O14646 1710 aa19.88■□□□□ 0.77
ZNF3-214ENST00000485892 TDRD9Q8NDG6 1382 aaKnown RBP19.88■□□□□ 0.77
ZNF3-214ENST00000485892 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
ZNF3-214ENST00000485892 WRNQ14191 1432 aaPredicted RBP eCLIP19.87■□□□□ 0.77
ZNF3-214ENST00000485892 TOP2BQ02880 1626 aa19.87■□□□□ 0.77
ZNF3-214ENST00000485892 OSCARQ8IYS5 282 aa19.85■□□□□ 0.77
ZNF3-214ENST00000485892 PBRM1Q86U86 1689 aa19.84■□□□□ 0.77
ZNF3-214ENST00000485892 FBLN2P98095 1184 aa19.81■□□□□ 0.76
ZNF3-214ENST00000485892 ABCA10Q8WWZ4 1543 aa19.76■□□□□ 0.75
ZNF3-214ENST00000485892 SNAPC4Q5SXM2 1469 aa19.76■□□□□ 0.75
ZNF3-214ENST00000485892 GAPVD1Q14C86 1478 aa19.75■□□□□ 0.75
ZNF3-214ENST00000485892 ABCA5Q8WWZ7 1642 aa19.75■□□□□ 0.75
ZNF3-214ENST00000485892 GRIN2BQ13224 1484 aa19.74■□□□□ 0.75
ZNF3-214ENST00000485892 MAGI1Q96QZ7 1491 aaPredicted RBP19.69■□□□□ 0.74
ZNF3-214ENST00000485892 CHMP7Q8WUX9 453 aaPredicted RBP19.67■□□□□ 0.74
ZNF3-214ENST00000485892 RIMBP3CA6NJZ7 1639 aa19.62■□□□□ 0.73
ZNF3-214ENST00000485892 RIMBP3BA6NNM3 1639 aa19.62■□□□□ 0.73
ZNF3-214ENST00000485892 RIMBP3Q9UFD9 1639 aa19.62■□□□□ 0.73
ZNF3-214ENST00000485892 SYNJ2O15056 1496 aa19.62■□□□□ 0.73
ZNF3-214ENST00000485892 TRIM41Q8WV44 630 aa19.61■□□□□ 0.73
ZNF3-214ENST00000485892 ADAMTS12P58397 1594 aa19.57■□□□□ 0.72
ZNF3-214ENST00000485892 ARHGEF11O15085 1522 aa19.56■□□□□ 0.72
ZNF3-214ENST00000485892 ERICH3Q5RHP9 1530 aa19.55■□□□□ 0.72
ZNF3-214ENST00000485892 CLASP1Q7Z460 1538 aa19.51■□□□□ 0.71
ZNF3-214ENST00000485892 GRIN2AQ12879 1464 aa19.5■□□□□ 0.71
ZNF3-214ENST00000485892 FHAD1B1AJZ9 1412 aa19.48■□□□□ 0.71
ZNF3-214ENST00000485892 KIF27Q86VH2 1401 aa19.46■□□□□ 0.71
ZNF3-214ENST00000485892 CEP170Q5SW79 1584 aa19.44■□□□□ 0.7
ZNF3-214ENST00000485892 CUL7Q14999 1698 aa19.42■□□□□ 0.7
ZNF3-214ENST00000485892 CYB5RLQ6IPT4 315 aa19.4■□□□□ 0.7
ZNF3-214ENST00000485892 ARAP1Q96P48 1450 aa19.37■□□□□ 0.69
ZNF3-214ENST00000485892 NUP160Q12769 1436 aa19.35■□□□□ 0.69
ZNF3-214ENST00000485892 IGF1RP08069 1367 aa19.34■□□□□ 0.69
ZNF3-214ENST00000485892 RUSC2Q8N2Y8 1516 aa19.3■□□□□ 0.68
ZNF3-214ENST00000485892 SHROOM2Q13796 1616 aa19.29■□□□□ 0.68
ZNF3-214ENST00000485892 ERCC6L2Q5T890 1561 aa19.28■□□□□ 0.68
ZNF3-214ENST00000485892 CARMIL1Q5VZK9 1371 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 226.7 ms