RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 DCAF8L2P0C7V8 631 aa19.99■□□□□ 0.79
FARP1-201ENST00000319562 PELP1Q8IZL8 1130 aaKnown RBP19.98■□□□□ 0.79
FARP1-201ENST00000319562 SUPT5HO00267 1087 aaKnown RBP19.13■□□□□ 0.65
FARP1-201ENST00000319562 ERICH6Q7L0X2 663 aa19.07■□□□□ 0.64
FARP1-201ENST00000319562 CCER1Q8TC90 406 aaPredicted RBP19.04■□□□□ 0.64
FARP1-201ENST00000319562 MYT1Q01538 1121 aa18.95■□□□□ 0.62
FARP1-201ENST00000319562 APLP2Q06481 763 aa18.88■□□□□ 0.61
FARP1-201ENST00000319562 CENPBP07199 599 aaPredicted RBP18.8■□□□□ 0.6
FARP1-201ENST00000319562 EHMT2Q96KQ7 1210 aa18.71■□□□□ 0.59
FARP1-201ENST00000319562 FAM9AQ8IZU1 332 aaPredicted RBP18.61■□□□□ 0.57
FARP1-201ENST00000319562 ZEB1P37275 1124 aaPredicted RBP18.51■□□□□ 0.55
FARP1-201ENST00000319562 SHROOM4Q9ULL8 1493 aa18.47■□□□□ 0.55
FARP1-201ENST00000319562 NEFLP07196 543 aa18.45■□□□□ 0.54
FARP1-201ENST00000319562 PCGF6Q9BYE7 350 aa18.37■□□□□ 0.53
FARP1-201ENST00000319562 YTHDC1Q96MU7 727 aaKnown RBP18.23■□□□□ 0.51
FARP1-201ENST00000319562 TTBK1Q5TCY1 1321 aaPredicted RBP18.2■□□□□ 0.5
FARP1-201ENST00000319562 DAXXQ9UER7 740 aaPredicted RBP18.15■□□□□ 0.5
FARP1-201ENST00000319562 NISCHQ9Y2I1 1504 aa18.05■□□□□ 0.48
FARP1-201ENST00000319562 ATP1B4Q9UN42 357 aaPredicted RBP17.91■□□□□ 0.46
FARP1-201ENST00000319562 RANGAP1P46060 587 aaPredicted RBP17.86■□□□□ 0.45
FARP1-201ENST00000319562 TRIM41Q8WV44 630 aa17.78■□□□□ 0.44
FARP1-201ENST00000319562 UBTFP17480 764 aaKnown RBP17.73■□□□□ 0.43
FARP1-201ENST00000319562 RTL5Q5HYW3 569 aaPredicted RBP17.73■□□□□ 0.43
FARP1-201ENST00000319562 ZNF316A6NFI3 1004 aaPredicted RBP17.66■□□□□ 0.42
FARP1-201ENST00000319562 TRIM26Q12899 539 aaPredicted RBP17.54■□□□□ 0.4
FARP1-201ENST00000319562 CLSPNQ9HAW4 1339 aa17.48■□□□□ 0.39
FARP1-201ENST00000319562 POLR3GLQ9BT43 218 aa17.47■□□□□ 0.39
FARP1-201ENST00000319562 HRCP23327 699 aa17.45■□□□□ 0.38
FARP1-201ENST00000319562 MYT1LQ9UL68 1186 aa17.31■□□□□ 0.36
FARP1-201ENST00000319562 PPARGC1BQ86YN6 1023 aaKnown RBP17.3■□□□□ 0.36
FARP1-201ENST00000319562 ITGAEP38570 1179 aa17.23■□□□□ 0.35
FARP1-201ENST00000319562 SLC4A1APQ9BWU0 796 aaKnown RBP17.22■□□□□ 0.35
FARP1-201ENST00000319562 CNGB1Q14028 1251 aaPredicted RBP17.2■□□□□ 0.34
FARP1-201ENST00000319562 DIEXFQ68CQ4 756 aaKnown RBP17.18■□□□□ 0.34
FARP1-201ENST00000319562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.15■□□□□ 0.34
FARP1-201ENST00000319562 HNRNPUL2Q1KMD3 747 aaKnown RBP17.15■□□□□ 0.34
FARP1-201ENST00000319562 CDK11AQ9UQ88 783 aaPredicted RBP17.15■□□□□ 0.34
FARP1-201ENST00000319562 ZBTB47Q9UFB7 747 aaPredicted RBP17.14■□□□□ 0.33
FARP1-201ENST00000319562 GLIPR1L2Q4G1C9 344 aa17.01■□□□□ 0.31
FARP1-201ENST00000319562 ANP32BQ92688 251 aaKnown RBP16.96■□□□□ 0.31
FARP1-201ENST00000319562 CHIC1Q5VXU3 224 aa16.95■□□□□ 0.3
FARP1-201ENST00000319562 ANP32AP39687 249 aaKnown RBP16.94■□□□□ 0.3
FARP1-201ENST00000319562 GTF3C3Q9Y5Q9 886 aa16.93■□□□□ 0.3
FARP1-201ENST00000319562 ANP32CO43423 234 aa16.92■□□□□ 0.3
FARP1-201ENST00000319562 BCANQ96GW7 911 aa16.91■□□□□ 0.3
FARP1-201ENST00000319562 EIF5BO60841 1220 aaKnown RBP16.89■□□□□ 0.29
FARP1-201ENST00000319562 CANXP27824 592 aaKnown RBP16.87■□□□□ 0.29
FARP1-201ENST00000319562 LOC105371045A0A1W2PR82 267 aa16.78■□□□□ 0.28
FARP1-201ENST00000319562 NEFMP07197 916 aa16.78■□□□□ 0.28
FARP1-201ENST00000319562 FAM50AQ14320 339 aaKnown RBP16.77■□□□□ 0.28
FARP1-201ENST00000319562 TRIM52Q96A61 297 aa16.77■□□□□ 0.27
FARP1-201ENST00000319562 NEUROD1Q13562 356 aa16.72■□□□□ 0.27
FARP1-201ENST00000319562 SLC24A1O60721 1099 aa16.71■□□□□ 0.27
FARP1-201ENST00000319562 HSP90AA1P07900 732 aaKnown RBP16.7■□□□□ 0.26
FARP1-201ENST00000319562 BCL11AQ9H165 835 aa16.68■□□□□ 0.26
FARP1-201ENST00000319562 UPF2Q9HAU5 1272 aaKnown RBP16.67■□□□□ 0.26
FARP1-201ENST00000319562 NPM2Q86SE8 214 aaKnown RBP16.64■□□□□ 0.25
FARP1-201ENST00000319562 ZNF326Q5BKZ1 582 aaKnown RBP16.6■□□□□ 0.25
FARP1-201ENST00000319562 ACIN1Q9UKV3 1341 aaKnown RBP16.59■□□□□ 0.25
FARP1-201ENST00000319562 CDK11BP21127 795 aaKnown RBP16.42■□□□□ 0.22
FARP1-201ENST00000319562 TNNT2P45379 298 aaPredicted RBP16.42■□□□□ 0.22
FARP1-201ENST00000319562 FKBP8Q14318 412 aa16.41■□□□□ 0.22
FARP1-201ENST00000319562 NBR1Q14596 966 aa16.38■□□□□ 0.21
FARP1-201ENST00000319562 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.36■□□□□ 0.21
FARP1-201ENST00000319562 ANP32EQ9BTT0 268 aa16.33■□□□□ 0.2
FARP1-201ENST00000319562 TRIM44Q96DX7 344 aaPredicted RBP16.31■□□□□ 0.2
FARP1-201ENST00000319562 CCDC136Q96JN2 1154 aa16.3■□□□□ 0.2
FARP1-201ENST00000319562 ARXQ96QS3 562 aa16.29■□□□□ 0.2
FARP1-201ENST00000319562 HNRNPUQ00839 825 aaKnown RBP eCLIP16.28■□□□□ 0.26e-6■■□□□ 13.5
FARP1-201ENST00000319562 BECN1Q14457 450 aa16.23■□□□□ 0.19
FARP1-201ENST00000319562 DDRGK1Q96HY6 314 aa16.22■□□□□ 0.19
FARP1-201ENST00000319562 NCLP19338 710 aaKnown RBP16.22■□□□□ 0.19
FARP1-201ENST00000319562 TONSLQ96HA7 1378 aa16.2■□□□□ 0.18
FARP1-201ENST00000319562 GOLGA6L22H0YM25 854 aa16.19■□□□□ 0.18
FARP1-201ENST00000319562 MYH16Q9H6N6 1097 aa16.19■□□□□ 0.18
FARP1-201ENST00000319562 FAM9BQ8IZU0 186 aa16.17■□□□□ 0.18
FARP1-201ENST00000319562 TMC1Q8TDI8 760 aa16.16■□□□□ 0.18
FARP1-201ENST00000319562 WDR43Q15061 677 aaKnown RBP eCLIP16.12■□□□□ 0.17
FARP1-201ENST00000319562 ERICH6BQ5W0A0 696 aa16.11■□□□□ 0.17
FARP1-201ENST00000319562 ZRSR1Q15695 479 aaKnown RBP16.1■□□□□ 0.17
FARP1-201ENST00000319562 DNTTIP2Q5QJE6 756 aaKnown RBP16.09■□□□□ 0.17
FARP1-201ENST00000319562 PTMAP06454 111 aaKnown RBP16.09■□□□□ 0.17
FARP1-201ENST00000319562 ESF1Q9H501 851 aaKnown RBP16.09■□□□□ 0.17
FARP1-201ENST00000319562 SALL2Q9Y467 1007 aaPredicted RBP16.07■□□□□ 0.16
FARP1-201ENST00000319562 DDX10Q13206 875 aaKnown RBP16.05■□□□□ 0.16
FARP1-201ENST00000319562 STAG3Q9UJ98 1225 aa16.05■□□□□ 0.16
FARP1-201ENST00000319562 FBLN2P98095 1184 aa16.05■□□□□ 0.16
FARP1-201ENST00000319562 ZNF777Q9ULD5 760 aaPredicted RBP16.02■□□□□ 0.16
FARP1-201ENST00000319562 NAP1L5Q96NT1 182 aaPredicted RBP15.99■□□□□ 0.15
FARP1-201ENST00000319562 CASC1Q6TDU7 716 aa15.99■□□□□ 0.15
FARP1-201ENST00000319562 MRS2Q9HD23 443 aa15.97■□□□□ 0.15
FARP1-201ENST00000319562 PPM1GO15355 546 aaPredicted RBP15.97■□□□□ 0.15
FARP1-201ENST00000319562 CHGAP10645 457 aaKnown RBP15.97■□□□□ 0.15
FARP1-201ENST00000319562 GOLGA6L6A8MZA4 724 aa15.96■□□□□ 0.15
FARP1-201ENST00000319562 P3H3Q8IVL6 736 aa15.92■□□□□ 0.14
FARP1-201ENST00000319562 NRDCO43847 1150 aa15.91■□□□□ 0.14
FARP1-201ENST00000319562 ARID3CA6NKF2 412 aa15.88■□□□□ 0.13
FARP1-201ENST00000319562 CHAF1AQ13111 956 aaPredicted RBP15.88■□□□□ 0.13
FARP1-201ENST00000319562 IRX6P78412 446 aaPredicted RBP15.86■□□□□ 0.13
FARP1-201ENST00000319562 CSRNP3Q8WYN3 585 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms